Protein–RNA interactions for Protein: A0A087WQQ0

Gm28557, Predicted gene 28557, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28557A0A087WQQ0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28557A0A087WQQ0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm28557A0A087WQQ0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Gm28557A0A087WQQ0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Gm28557A0A087WQQ0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm28557A0A087WQQ0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Gm28557A0A087WQQ0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28557A0A087WQQ0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28557A0A087WQQ0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28557A0A087WQQ0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm28557A0A087WQQ0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gm28557A0A087WQQ0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Gm28557A0A087WQQ0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Gm28557A0A087WQQ0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Gm28557A0A087WQQ0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Gm28557A0A087WQQ0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Gm28557A0A087WQQ0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.64■□□□□ 0.89
Gm28557A0A087WQQ0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.64■□□□□ 0.89
Gm28557A0A087WQQ0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gm28557A0A087WQQ0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.63■□□□□ 0.89
Gm28557A0A087WQQ0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gm28557A0A087WQQ0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gm28557A0A087WQQ0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Gm28557A0A087WQQ0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm28557A0A087WQQ0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm28557A0A087WQQ0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.62■□□□□ 0.89
Gm28557A0A087WQQ0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Gm28557A0A087WQQ0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm28557A0A087WQQ0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm28557A0A087WQQ0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm28557A0A087WQQ0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Gm28557A0A087WQQ0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm28557A0A087WQQ0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm28557A0A087WQQ0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gm28557A0A087WQQ0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Gm28557A0A087WQQ0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm28557A0A087WQQ0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm28557A0A087WQQ0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.6■□□□□ 0.89
Gm28557A0A087WQQ0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Gm28557A0A087WQQ0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.59■□□□□ 0.89
Gm28557A0A087WQQ0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm28557A0A087WQQ0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gm28557A0A087WQQ0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm28557A0A087WQQ0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Gm28557A0A087WQQ0 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.58■□□□□ 0.88
Gm28557A0A087WQQ0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm28557A0A087WQQ0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gm28557A0A087WQQ0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm28557A0A087WQQ0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm28557A0A087WQQ0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm28557A0A087WQQ0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm28557A0A087WQQ0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm28557A0A087WQQ0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Gm28557A0A087WQQ0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm28557A0A087WQQ0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm28557A0A087WQQ0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm28557A0A087WQQ0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm28557A0A087WQQ0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm28557A0A087WQQ0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Gm28557A0A087WQQ0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm28557A0A087WQQ0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm28557A0A087WQQ0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Gm28557A0A087WQQ0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm28557A0A087WQQ0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28557A0A087WQQ0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28557A0A087WQQ0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28557A0A087WQQ0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
Gm28557A0A087WQQ0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm28557A0A087WQQ0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm28557A0A087WQQ0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.53■□□□□ 0.88
Gm28557A0A087WQQ0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm28557A0A087WQQ0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm28557A0A087WQQ0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm28557A0A087WQQ0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm28557A0A087WQQ0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Gm28557A0A087WQQ0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm28557A0A087WQQ0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.52■□□□□ 0.88
Gm28557A0A087WQQ0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm28557A0A087WQQ0 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.52■□□□□ 0.88
Gm28557A0A087WQQ0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Gm28557A0A087WQQ0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm28557A0A087WQQ0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Gm28557A0A087WQQ0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28557A0A087WQQ0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.51■□□□□ 0.87
Gm28557A0A087WQQ0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28557A0A087WQQ0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28557A0A087WQQ0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28557A0A087WQQ0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28557A0A087WQQ0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28557A0A087WQQ0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28557A0A087WQQ0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28557A0A087WQQ0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Gm28557A0A087WQQ0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28557A0A087WQQ0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28557A0A087WQQ0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Gm28557A0A087WQQ0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Gm28557A0A087WQQ0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28557A0A087WQQ0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28557A0A087WQQ0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28557A0A087WQQ0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms