Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9d-3A0A075B695 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9d-3A0A075B695 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9d-3A0A075B695 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9d-3A0A075B695 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9d-3A0A075B695 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav9d-3A0A075B695 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav9d-3A0A075B695 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav9d-3A0A075B695 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav9d-3A0A075B695 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav9d-3A0A075B695 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Trav9d-3A0A075B695 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9d-3A0A075B695 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9d-3A0A075B695 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9d-3A0A075B695 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC16.26■□□□□ 0.19
Trav9d-3A0A075B695 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9d-3A0A075B695 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9d-3A0A075B695 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9d-3A0A075B695 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9d-3A0A075B695 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav9d-3A0A075B695 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav9d-3A0A075B695 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav9d-3A0A075B695 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trav9d-3A0A075B695 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Trav9d-3A0A075B695 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav9d-3A0A075B695 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav9d-3A0A075B695 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trav9d-3A0A075B695 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav9d-3A0A075B695 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav9d-3A0A075B695 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav9d-3A0A075B695 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trav9d-3A0A075B695 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Trav9d-3A0A075B695 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav9d-3A0A075B695 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9d-3A0A075B695 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9d-3A0A075B695 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9d-3A0A075B695 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9d-3A0A075B695 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9d-3A0A075B695 Gm8503-201ENSMUST00000118131 455 ntBASIC16.21■□□□□ 0.19
Trav9d-3A0A075B695 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC16.21■□□□□ 0.19
Trav9d-3A0A075B695 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav9d-3A0A075B695 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav9d-3A0A075B695 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav9d-3A0A075B695 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav9d-3A0A075B695 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trav9d-3A0A075B695 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trav9d-3A0A075B695 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav9d-3A0A075B695 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Trav9d-3A0A075B695 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
Trav9d-3A0A075B695 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav9d-3A0A075B695 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trav9d-3A0A075B695 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC16.19■□□□□ 0.18
Trav9d-3A0A075B695 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav9d-3A0A075B695 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav9d-3A0A075B695 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9d-3A0A075B695 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9d-3A0A075B695 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trav9d-3A0A075B695 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9d-3A0A075B695 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav9d-3A0A075B695 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav9d-3A0A075B695 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav9d-3A0A075B695 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav9d-3A0A075B695 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trav9d-3A0A075B695 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav9d-3A0A075B695 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC16.17■□□□□ 0.18
Trav9d-3A0A075B695 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav9d-3A0A075B695 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9d-3A0A075B695 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav9d-3A0A075B695 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9d-3A0A075B695 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9d-3A0A075B695 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9d-3A0A075B695 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav9d-3A0A075B695 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
Trav9d-3A0A075B695 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9d-3A0A075B695 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9d-3A0A075B695 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9d-3A0A075B695 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9d-3A0A075B695 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9d-3A0A075B695 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9d-3A0A075B695 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav9d-3A0A075B695 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9d-3A0A075B695 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9d-3A0A075B695 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9d-3A0A075B695 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav9d-3A0A075B695 Gm14121-201ENSMUST00000121441 1380 ntBASIC16.13■□□□□ 0.17
Trav9d-3A0A075B695 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav9d-3A0A075B695 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav9d-3A0A075B695 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav9d-3A0A075B695 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav9d-3A0A075B695 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav9d-3A0A075B695 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav9d-3A0A075B695 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav9d-3A0A075B695 Gm37136-201ENSMUST00000194368 194 ntBASIC16.12■□□□□ 0.17
Trav9d-3A0A075B695 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav9d-3A0A075B695 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav9d-3A0A075B695 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav9d-3A0A075B695 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav9d-3A0A075B695 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.11■□□□□ 0.17
Trav9d-3A0A075B695 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC16.11■□□□□ 0.17
Trav9d-3A0A075B695 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 112.1 ms