Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trav6-6A0A075B603 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-6A0A075B603 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Trav6-6A0A075B603 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-6A0A075B603 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-6A0A075B603 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-6A0A075B603 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav6-6A0A075B603 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav6-6A0A075B603 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Trav6-6A0A075B603 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav6-6A0A075B603 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6-6A0A075B603 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6-6A0A075B603 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.01■□□□□ 0.31
Trav6-6A0A075B603 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Trav6-6A0A075B603 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.01■□□□□ 0.31
Trav6-6A0A075B603 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.01■□□□□ 0.31
Trav6-6A0A075B603 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.01■□□□□ 0.31
Trav6-6A0A075B603 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6-6A0A075B603 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6-6A0A075B603 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6-6A0A075B603 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17■□□□□ 0.31
Trav6-6A0A075B603 Gm24970-201ENSMUST00000175582 82 ntBASIC17■□□□□ 0.31
Trav6-6A0A075B603 Gm9397-201ENSMUST00000200125 605 ntBASIC17■□□□□ 0.31
Trav6-6A0A075B603 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17■□□□□ 0.31
Trav6-6A0A075B603 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav6-6A0A075B603 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-6A0A075B603 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trav6-6A0A075B603 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC16.99■□□□□ 0.31
Trav6-6A0A075B603 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-6A0A075B603 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trav6-6A0A075B603 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-6A0A075B603 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav6-6A0A075B603 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC16.98■□□□□ 0.31
Trav6-6A0A075B603 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC16.98■□□□□ 0.31
Trav6-6A0A075B603 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-6A0A075B603 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-6A0A075B603 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav6-6A0A075B603 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6-6A0A075B603 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6-6A0A075B603 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trav6-6A0A075B603 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6-6A0A075B603 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav6-6A0A075B603 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC16.96■□□□□ 0.31
Trav6-6A0A075B603 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav6-6A0A075B603 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav6-6A0A075B603 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-6A0A075B603 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-6A0A075B603 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-6A0A075B603 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC16.95■□□□□ 0.3
Trav6-6A0A075B603 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-6A0A075B603 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trav6-6A0A075B603 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav6-6A0A075B603 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Trav6-6A0A075B603 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Trav6-6A0A075B603 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-6A0A075B603 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-6A0A075B603 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-6A0A075B603 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav6-6A0A075B603 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC16.93■□□□□ 0.3
Trav6-6A0A075B603 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-6A0A075B603 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-6A0A075B603 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trav6-6A0A075B603 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav6-6A0A075B603 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trav6-6A0A075B603 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-6A0A075B603 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-6A0A075B603 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trav6-6A0A075B603 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-6A0A075B603 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-6A0A075B603 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trav6-6A0A075B603 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-6A0A075B603 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC16.92■□□□□ 0.3
Trav6-6A0A075B603 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav6-6A0A075B603 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trav6-6A0A075B603 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-6A0A075B603 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-6A0A075B603 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav6-6A0A075B603 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-6A0A075B603 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-6A0A075B603 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-6A0A075B603 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-6A0A075B603 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trav6-6A0A075B603 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-6A0A075B603 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.9■□□□□ 0.3
Trav6-6A0A075B603 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav6-6A0A075B603 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-6A0A075B603 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.89■□□□□ 0.29
Trav6-6A0A075B603 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-6A0A075B603 Gm45855-201ENSMUST00000212546 880 ntBASIC16.89■□□□□ 0.29
Trav6-6A0A075B603 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-6A0A075B603 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav6-6A0A075B603 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trav6-6A0A075B603 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trav6-6A0A075B603 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-6A0A075B603 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
Trav6-6A0A075B603 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.88■□□□□ 0.29
Trav6-6A0A075B603 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-6A0A075B603 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-6A0A075B603 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-6A0A075B603 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms