RNA–Protein interactions for RNA: ENST00000564863.5

SENP8-204, Transcript of SUMO peptidase family member, NEDD8 specific, humanhuman

TSL 3

Gene SENP8, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP8-204ENST00000564863 CHIC1Q5VXU3 224 aa10.54□□□□□ -0.72
SENP8-204ENST00000564863 AEBP2Q6ZN18 517 aaPredicted RBP10.12□□□□□ -0.79
SENP8-204ENST00000564863 SLC24A1O60721 1099 aa9.46□□□□□ -0.9
SENP8-204ENST00000564863 PHF23Q9BUL5 403 aaPredicted RBP9.26□□□□□ -0.93
SENP8-204ENST00000564863 EHMT2Q96KQ7 1210 aa8.91□□□□□ -0.98
SENP8-204ENST00000564863 PLPPR3Q6T4P5 718 aa8.89□□□□□ -0.99
SENP8-204ENST00000564863 AMER1Q5JTC6 1135 aaPredicted RBP8.65□□□□□ -1.02
SENP8-204ENST00000564863 SENP3Q9H4L4 574 aaPredicted RBP8.64□□□□□ -1.03
SENP8-204ENST00000564863 DAXXQ9UER7 740 aaPredicted RBP8.57□□□□□ -1.04
SENP8-204ENST00000564863 NCBP3Q53F19 620 aaKnown RBP8.53□□□□□ -1.04
SENP8-204ENST00000564863 RTN4Q9NQC3 1192 aaKnown RBP8.51□□□□□ -1.05
SENP8-204ENST00000564863 CSRNP3Q8WYN3 585 aa8.33□□□□□ -1.08
SENP8-204ENST00000564863 KCNA4P22459 653 aa8.3□□□□□ -1.08
SENP8-204ENST00000564863 TTBK1Q5TCY1 1321 aaPredicted RBP8.27□□□□□ -1.09
SENP8-204ENST00000564863 ARXQ96QS3 562 aa8.24□□□□□ -1.09
SENP8-204ENST00000564863 ADRA2BP18089 450 aa8.16□□□□□ -1.1
SENP8-204ENST00000564863 MYT1Q01538 1121 aa8.15□□□□□ -1.1
SENP8-204ENST00000564863 PELP1Q8IZL8 1130 aaKnown RBP8.13□□□□□ -1.11
SENP8-204ENST00000564863 SLC4A1APQ9BWU0 796 aaKnown RBP8.1□□□□□ -1.11
SENP8-204ENST00000564863 RANGAP1P46060 587 aaPredicted RBP8.06□□□□□ -1.12
SENP8-204ENST00000564863 BCANQ96GW7 911 aa8.06□□□□□ -1.12
SENP8-204ENST00000564863 ERICH6Q7L0X2 663 aa8.04□□□□□ -1.12
SENP8-204ENST00000564863 PRKCSHP14314 528 aaPredicted RBP7.98□□□□□ -1.13
SENP8-204ENST00000564863 HOMEZQ8IX15 550 aa7.97□□□□□ -1.13
SENP8-204ENST00000564863 TAOK2Q9UL54 1235 aa7.97□□□□□ -1.13
SENP8-204ENST00000564863 PPP6R1Q9UPN7 881 aa7.96□□□□□ -1.14
SENP8-204ENST00000564863 APLP2Q06481 763 aa7.89□□□□□ -1.15
SENP8-204ENST00000564863 TIMELESSQ9UNS1 1208 aa7.87□□□□□ -1.15
SENP8-204ENST00000564863 FOXD1Q16676 465 aa7.85□□□□□ -1.15
SENP8-204ENST00000564863 PPP4R3CPQ6ZMV5 832 aa7.85□□□□□ -1.15
SENP8-204ENST00000564863 TULP1O00294 542 aaPredicted RBP7.83□□□□□ -1.16
SENP8-204ENST00000564863 PLCB2Q00722 1185 aa7.83□□□□□ -1.16
SENP8-204ENST00000564863 TPRNQ4KMQ1 711 aa7.8□□□□□ -1.16
SENP8-204ENST00000564863 HAP1P54257 671 aaPredicted RBP7.74□□□□□ -1.17
SENP8-204ENST00000564863 GTF3C3Q9Y5Q9 886 aa7.73□□□□□ -1.17
SENP8-204ENST00000564863 VSIG10Q8N0Z9 540 aa7.71□□□□□ -1.18
SENP8-204ENST00000564863 NPM3O75607 178 aaKnown RBP7.69□□□□□ -1.18
SENP8-204ENST00000564863 PIAS4Q8N2W9 510 aaPredicted RBP7.62□□□□□ -1.19
SENP8-204ENST00000564863 PODXL2Q9NZ53 605 aa7.62□□□□□ -1.19
SENP8-204ENST00000564863 ZBTB22O15209 634 aa7.6□□□□□ -1.19
SENP8-204ENST00000564863 FBXO3Q9UK99 471 aa7.57□□□□□ -1.2
SENP8-204ENST00000564863 FKBP8Q14318 412 aa7.54□□□□□ -1.2
SENP8-204ENST00000564863 C14orf37Q86TY3 774 aa7.54□□□□□ -1.2
SENP8-204ENST00000564863 CNKSR2Q8WXI2 1034 aa7.54□□□□□ -1.2
SENP8-204ENST00000564863 FOXD4L1Q9NU39 408 aa7.54□□□□□ -1.2
SENP8-204ENST00000564863 TMEM132AQ24JP5 1023 aa7.53□□□□□ -1.2
SENP8-204ENST00000564863 NPM2Q86SE8 214 aaKnown RBP7.51□□□□□ -1.21
SENP8-204ENST00000564863 SCAF1Q9H7N4 1312 aaKnown RBP7.51□□□□□ -1.21
SENP8-204ENST00000564863 DCAF8L2P0C7V8 631 aa7.48□□□□□ -1.21
SENP8-204ENST00000564863 EIF5BO60841 1220 aaKnown RBP7.43□□□□□ -1.22
SENP8-204ENST00000564863 KLHL34Q8N239 644 aa7.43□□□□□ -1.22
SENP8-204ENST00000564863 DNAJC5BQ9UF47 199 aa7.42□□□□□ -1.22
SENP8-204ENST00000564863 POTEDQ86YR6 584 aa7.36□□□□□ -1.23
SENP8-204ENST00000564863 NBR1Q14596 966 aa7.33□□□□□ -1.24
SENP8-204ENST00000564863 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.32□□□□□ -1.24
SENP8-204ENST00000564863 KDM2AQ9Y2K7 1162 aa7.31□□□□□ -1.24
SENP8-204ENST00000564863 ATXN8OSP0DMR3 200 aa7.26□□□□□ -1.25
SENP8-204ENST00000564863 RNF216Q9NWF9 866 aaPredicted RBP7.25□□□□□ -1.25
SENP8-204ENST00000564863 HMGB1P09429 215 aaKnown RBP7.23□□□□□ -1.25
SENP8-204ENST00000564863 TRIM26Q12899 539 aaPredicted RBP7.23□□□□□ -1.25
SENP8-204ENST00000564863 FBLN2P98095 1184 aa7.22□□□□□ -1.25
SENP8-204ENST00000564863 SUPT5HO00267 1087 aaKnown RBP7.21□□□□□ -1.26
SENP8-204ENST00000564863 BBXQ8WY36 941 aaPredicted RBP7.2□□□□□ -1.26
SENP8-204ENST00000564863 MYCNP04198 464 aaPredicted RBP7.16□□□□□ -1.26
SENP8-204ENST00000564863 PAXIP1Q6ZW49 1069 aaPredicted RBP7.15□□□□□ -1.26
SENP8-204ENST00000564863 CDK11AQ9UQ88 783 aaPredicted RBP7.15□□□□□ -1.26
SENP8-204ENST00000564863 CCDC9Q9Y3X0 531 aaKnown RBP7.15□□□□□ -1.26
SENP8-204ENST00000564863 MSH5O43196 834 aa7.13□□□□□ -1.27
SENP8-204ENST00000564863 CFAP44Q96MT7 982 aa7.13□□□□□ -1.27
SENP8-204ENST00000564863 SHROOM4Q9ULL8 1493 aa7.12□□□□□ -1.27
SENP8-204ENST00000564863 UBTFP17480 764 aaKnown RBP7.12□□□□□ -1.27
SENP8-204ENST00000564863 HRCP23327 699 aa7.09□□□□□ -1.27
SENP8-204ENST00000564863 CDK11BP21127 795 aaKnown RBP7.08□□□□□ -1.28
SENP8-204ENST00000564863 ZBTB7CA1YPR0 619 aa7.07□□□□□ -1.28
SENP8-204ENST00000564863 SLC4A2P04920 1241 aa7.07□□□□□ -1.28
SENP8-204ENST00000564863 MAPK8IP2Q13387 824 aaPredicted RBP7.07□□□□□ -1.28
SENP8-204ENST00000564863 SPRYD3Q8NCJ5 442 aa7.06□□□□□ -1.28
SENP8-204ENST00000564863 HSP90B1P14625 803 aaKnown RBP7.03□□□□□ -1.28
SENP8-204ENST00000564863 HOXD11P31277 338 aaPredicted RBP7.03□□□□□ -1.28
SENP8-204ENST00000564863 TSHZ2Q9NRE2 1034 aa7.01□□□□□ -1.29
SENP8-204ENST00000564863 DNAJC5Q9H3Z4 198 aa6.97□□□□□ -1.29
SENP8-204ENST00000564863 LOC105371045A0A1W2PR82 267 aa6.96□□□□□ -1.3
SENP8-204ENST00000564863 PKD2Q13563 968 aa6.95□□□□□ -1.3
SENP8-204ENST00000564863 DMRT2Q9Y5R5 561 aa6.95□□□□□ -1.3
SENP8-204ENST00000564863 PDIA4P13667 645 aaKnown RBP6.94□□□□□ -1.3
SENP8-204ENST00000564863 RSPH6AQ9H0K4 717 aa6.93□□□□□ -1.3
SENP8-204ENST00000564863 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.9□□□□□ -1.3
SENP8-204ENST00000564863 VASPP50552 380 aaPredicted RBP6.9□□□□□ -1.3
SENP8-204ENST00000564863 HNRNPUL2Q1KMD3 747 aaKnown RBP6.9□□□□□ -1.3
SENP8-204ENST00000564863 PUS7Q96PZ0 661 aaKnown RBP6.89□□□□□ -1.31
SENP8-204ENST00000564863 ZMYND15Q9H091 742 aa6.89□□□□□ -1.31
SENP8-204ENST00000564863 NPM1P06748 294 aaKnown RBP eCLIP6.88□□□□□ -1.31
SENP8-204ENST00000564863 SAMD1Q6SPF0 538 aaPredicted RBP6.87□□□□□ -1.31
SENP8-204ENST00000564863 BRD2P25440 801 aaKnown RBP6.84□□□□□ -1.31
SENP8-204ENST00000564863 BRPF1P55201 1214 aaPredicted RBP6.84□□□□□ -1.31
SENP8-204ENST00000564863 ECM2O94769 699 aaPredicted RBP6.83□□□□□ -1.32
SENP8-204ENST00000564863 PLEKHG5O94827 1062 aa6.83□□□□□ -1.32
SENP8-204ENST00000564863 IFNLR1Q8IU57 520 aaPredicted RBP6.82□□□□□ -1.32
SENP8-204ENST00000564863 ARID3AQ99856 593 aa6.82□□□□□ -1.32
SENP8-204ENST00000564863 CHMP4AQ9BY43 222 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms