RNA–Protein interactions for RNA: ENST00000557684.5

CASC1-213, Transcript of cancer susceptibility 1, humanhuman

TSL 2

Gene CASC1, Length 1,626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-213ENST00000557684 AEBP2Q6ZN18 517 aaPredicted RBP19.08■□□□□ 0.65
CASC1-213ENST00000557684 CHIC1Q5VXU3 224 aa18.18■□□□□ 0.5
CASC1-213ENST00000557684 SENP3Q9H4L4 574 aaPredicted RBP16.33■□□□□ 0.2
CASC1-213ENST00000557684 SLC24A1O60721 1099 aa16.19■□□□□ 0.18
CASC1-213ENST00000557684 PHF23Q9BUL5 403 aaPredicted RBP16.18■□□□□ 0.18
CASC1-213ENST00000557684 EHMT2Q96KQ7 1210 aa15.99■□□□□ 0.15
CASC1-213ENST00000557684 POTEDQ86YR6 584 aa15.57■□□□□ 0.08
CASC1-213ENST00000557684 PLPPR3Q6T4P5 718 aa15.25■□□□□ 0.03
CASC1-213ENST00000557684 FOXD1Q16676 465 aa15.17■□□□□ 0.02
CASC1-213ENST00000557684 KCNA4P22459 653 aa15.17■□□□□ 0.02
CASC1-213ENST00000557684 CSRNP3Q8WYN3 585 aa15.15■□□□□ 0.02
CASC1-213ENST00000557684 RTN4Q9NQC3 1192 aaKnown RBP15.08■□□□□ 0
CASC1-213ENST00000557684 AMER1Q5JTC6 1135 aaPredicted RBP14.88□□□□□ -0.03
CASC1-213ENST00000557684 SLC4A1APQ9BWU0 796 aaKnown RBP14.61□□□□□ -0.07
CASC1-213ENST00000557684 NCBP3Q53F19 620 aaKnown RBP14.53□□□□□ -0.08
CASC1-213ENST00000557684 ADRA2BP18089 450 aa14.43□□□□□ -0.1
CASC1-213ENST00000557684 MSH5O43196 834 aa14.24□□□□□ -0.13
CASC1-213ENST00000557684 PPP6R1Q9UPN7 881 aa14.19□□□□□ -0.14
CASC1-213ENST00000557684 PIAS4Q8N2W9 510 aaPredicted RBP14.17□□□□□ -0.14
CASC1-213ENST00000557684 DAXXQ9UER7 740 aaPredicted RBP14.17□□□□□ -0.14
CASC1-213ENST00000557684 PRKCSHP14314 528 aaPredicted RBP14.09□□□□□ -0.15
CASC1-213ENST00000557684 ZBTB22O15209 634 aa14.08□□□□□ -0.15
CASC1-213ENST00000557684 TAOK2Q9UL54 1235 aa13.81□□□□□ -0.2
CASC1-213ENST00000557684 BCANQ96GW7 911 aa13.73□□□□□ -0.21
CASC1-213ENST00000557684 PLCB2Q00722 1185 aa13.69□□□□□ -0.22
CASC1-213ENST00000557684 PPP4R3CPQ6ZMV5 832 aa13.69□□□□□ -0.22
CASC1-213ENST00000557684 ARXQ96QS3 562 aa13.68□□□□□ -0.22
CASC1-213ENST00000557684 NPM3O75607 178 aaKnown RBP13.66□□□□□ -0.22
CASC1-213ENST00000557684 TIMELESSQ9UNS1 1208 aa13.66□□□□□ -0.22
CASC1-213ENST00000557684 TPRNQ4KMQ1 711 aa13.54□□□□□ -0.24
CASC1-213ENST00000557684 FKBP8Q14318 412 aa13.52□□□□□ -0.25
CASC1-213ENST00000557684 TULP1O00294 542 aaPredicted RBP13.46□□□□□ -0.25
CASC1-213ENST00000557684 HAP1P54257 671 aaPredicted RBP13.46□□□□□ -0.25
CASC1-213ENST00000557684 FOXD4L1Q9NU39 408 aa13.41□□□□□ -0.26
CASC1-213ENST00000557684 VSIG10Q8N0Z9 540 aa13.28□□□□□ -0.28
CASC1-213ENST00000557684 HOMEZQ8IX15 550 aa13.26□□□□□ -0.29
CASC1-213ENST00000557684 GTF3C3Q9Y5Q9 886 aa13.2□□□□□ -0.3
CASC1-213ENST00000557684 KDM2AQ9Y2K7 1162 aa13.1□□□□□ -0.31
CASC1-213ENST00000557684 ERICH6Q7L0X2 663 aa13.04□□□□□ -0.32
CASC1-213ENST00000557684 SCAF1Q9H7N4 1312 aaKnown RBP13□□□□□ -0.33
CASC1-213ENST00000557684 FBLN2P98095 1184 aa12.97□□□□□ -0.33
CASC1-213ENST00000557684 RANGAP1P46060 587 aaPredicted RBP12.95□□□□□ -0.34
CASC1-213ENST00000557684 MAPK8IP2Q13387 824 aaPredicted RBP12.95□□□□□ -0.34
CASC1-213ENST00000557684 TMEM132AQ24JP5 1023 aa12.95□□□□□ -0.34
CASC1-213ENST00000557684 DNAJC5BQ9UF47 199 aa12.95□□□□□ -0.34
CASC1-213ENST00000557684 DMRT2Q9Y5R5 561 aa12.95□□□□□ -0.34
CASC1-213ENST00000557684 CNKSR2Q8WXI2 1034 aa12.91□□□□□ -0.34
CASC1-213ENST00000557684 PODXL2Q9NZ53 605 aa12.85□□□□□ -0.35
CASC1-213ENST00000557684 DCAF8L2P0C7V8 631 aa12.84□□□□□ -0.35
CASC1-213ENST00000557684 C14orf37Q86TY3 774 aa12.77□□□□□ -0.36
CASC1-213ENST00000557684 ATXN8OSP0DMR3 200 aa12.76□□□□□ -0.37
CASC1-213ENST00000557684 KLHL34Q8N239 644 aa12.69□□□□□ -0.38
CASC1-213ENST00000557684 APLP2Q06481 763 aa12.66□□□□□ -0.38
CASC1-213ENST00000557684 PAXIP1Q6ZW49 1069 aaPredicted RBP12.62□□□□□ -0.39
CASC1-213ENST00000557684 PKD2Q13563 968 aa12.61□□□□□ -0.39
CASC1-213ENST00000557684 BBXQ8WY36 941 aaPredicted RBP12.59□□□□□ -0.39
CASC1-213ENST00000557684 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.59□□□□□ -0.39
CASC1-213ENST00000557684 CACNB1Q02641 598 aaPredicted RBP12.57□□□□□ -0.4
CASC1-213ENST00000557684 SLC4A2P04920 1241 aa12.55□□□□□ -0.4
CASC1-213ENST00000557684 CFAP44Q96MT7 982 aa12.55□□□□□ -0.4
CASC1-213ENST00000557684 TSHZ2Q9NRE2 1034 aa12.55□□□□□ -0.4
CASC1-213ENST00000557684 NPM1P06748 294 aaKnown RBP eCLIP12.53□□□□□ -0.4
CASC1-213ENST00000557684 NBR1Q14596 966 aa12.52□□□□□ -0.4
CASC1-213ENST00000557684 NPM2Q86SE8 214 aaKnown RBP12.51□□□□□ -0.41
CASC1-213ENST00000557684 HOXD11P31277 338 aaPredicted RBP12.5□□□□□ -0.41
CASC1-213ENST00000557684 SUPT5HO00267 1087 aaKnown RBP12.49□□□□□ -0.41
CASC1-213ENST00000557684 FBXO3Q9UK99 471 aa12.48□□□□□ -0.41
CASC1-213ENST00000557684 MYCNP04198 464 aaPredicted RBP12.44□□□□□ -0.42
CASC1-213ENST00000557684 TRIM26Q12899 539 aaPredicted RBP12.44□□□□□ -0.42
CASC1-213ENST00000557684 DNAJC5Q9H3Z4 198 aa12.44□□□□□ -0.42
CASC1-213ENST00000557684 IFNLR1Q8IU57 520 aaPredicted RBP12.43□□□□□ -0.42
CASC1-213ENST00000557684 RNF216Q9NWF9 866 aaPredicted RBP12.4□□□□□ -0.42
CASC1-213ENST00000557684 VASPP50552 380 aaPredicted RBP12.4□□□□□ -0.42
CASC1-213ENST00000557684 UBTFP17480 764 aaKnown RBP12.37□□□□□ -0.43
CASC1-213ENST00000557684 PELP1Q8IZL8 1130 aaKnown RBP12.33□□□□□ -0.43
CASC1-213ENST00000557684 SPRYD3Q8NCJ5 442 aa12.33□□□□□ -0.43
CASC1-213ENST00000557684 HRCP23327 699 aa12.32□□□□□ -0.44
CASC1-213ENST00000557684 DCAF8L1A6NGE4 600 aa12.3□□□□□ -0.44
CASC1-213ENST00000557684 TTBK1Q5TCY1 1321 aaPredicted RBP12.27□□□□□ -0.45
CASC1-213ENST00000557684 ATF5Q9Y2D1 282 aaPredicted RBP12.2□□□□□ -0.46
CASC1-213ENST00000557684 PROM2Q8N271 834 aa12.15□□□□□ -0.46
CASC1-213ENST00000557684 RNF39Q9H2S5 420 aa12.15□□□□□ -0.47
CASC1-213ENST00000557684 ECM2O94769 699 aaPredicted RBP12.13□□□□□ -0.47
CASC1-213ENST00000557684 MYT1Q01538 1121 aa12.12□□□□□ -0.47
CASC1-213ENST00000557684 RGL2O15211 777 aa12.08□□□□□ -0.48
CASC1-213ENST00000557684 BRPF1P55201 1214 aaPredicted RBP12.06□□□□□ -0.48
CASC1-213ENST00000557684 SPDYE4A6NLX3 237 aa12.04□□□□□ -0.48
CASC1-213ENST00000557684 C1QBPQ07021 282 aaKnown RBP11.99□□□□□ -0.49
CASC1-213ENST00000557684 TRHP20396 242 aaPredicted RBP11.97□□□□□ -0.49
CASC1-213ENST00000557684 LOC105371045A0A1W2PR82 267 aa11.95□□□□□ -0.5
CASC1-213ENST00000557684 POTEHQ6S545 545 aa11.93□□□□□ -0.5
CASC1-213ENST00000557684 CHGAP10645 457 aaKnown RBP11.92□□□□□ -0.5
CASC1-213ENST00000557684 SPOCK2Q92563 424 aa11.89□□□□□ -0.51
CASC1-213ENST00000557684 CCDC9Q9Y3X0 531 aaKnown RBP11.85□□□□□ -0.51
CASC1-213ENST00000557684 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.83□□□□□ -0.52
CASC1-213ENST00000557684 ZMYND15Q9H091 742 aa11.82□□□□□ -0.52
CASC1-213ENST00000557684 EIF5BO60841 1220 aaKnown RBP11.79□□□□□ -0.52
CASC1-213ENST00000557684 RSPH6AQ9H0K4 717 aa11.78□□□□□ -0.52
CASC1-213ENST00000557684 NEUROD2Q15784 382 aa11.78□□□□□ -0.52
CASC1-213ENST00000557684 LMOD2Q6P5Q4 547 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms