RNA–Protein interactions for RNA: ENST00000527401.5

PHF21A-207, Transcript of PHD finger protein 21A, humanhuman

TSL 2

Gene PHF21A, Length 8,954 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF21A-207ENST00000527401 MYT1Q01538 1121 aa18.77■□□□□ 0.59
PHF21A-207ENST00000527401 PELP1Q8IZL8 1130 aaKnown RBP18.55■□□□□ 0.56
PHF21A-207ENST00000527401 TTBK1Q5TCY1 1321 aaPredicted RBP17.35■□□□□ 0.37
PHF21A-207ENST00000527401 CCER1Q8TC90 406 aaPredicted RBP17.31■□□□□ 0.36
PHF21A-207ENST00000527401 CENPBP07199 599 aaPredicted RBP17.29■□□□□ 0.36
PHF21A-207ENST00000527401 ZEB1P37275 1124 aaPredicted RBP17.12■□□□□ 0.33
PHF21A-207ENST00000527401 ERICH6Q7L0X2 663 aa17.11■□□□□ 0.33
PHF21A-207ENST00000527401 YTHDC1Q96MU7 727 aaKnown RBP17■□□□□ 0.31
PHF21A-207ENST00000527401 NEFLP07196 543 aa16.56■□□□□ 0.24
PHF21A-207ENST00000527401 PCGF6Q9BYE7 350 aa16.48■□□□□ 0.23
PHF21A-207ENST00000527401 SUPT5HO00267 1087 aaKnown RBP16.34■□□□□ 0.21
PHF21A-207ENST00000527401 HRCP23327 699 aa16.31■□□□□ 0.2
PHF21A-207ENST00000527401 NISCHQ9Y2I1 1504 aa16.29■□□□□ 0.2
PHF21A-207ENST00000527401 APLP2Q06481 763 aa16.23■□□□□ 0.19
PHF21A-207ENST00000527401 RTL5Q5HYW3 569 aaPredicted RBP16.18■□□□□ 0.18
PHF21A-207ENST00000527401 DAXXQ9UER7 740 aaPredicted RBP16.15■□□□□ 0.18
PHF21A-207ENST00000527401 MYT1LQ9UL68 1186 aa16.14■□□□□ 0.17
PHF21A-207ENST00000527401 GLIPR1L2Q4G1C9 344 aa16.13■□□□□ 0.17
PHF21A-207ENST00000527401 DCAF8L2P0C7V8 631 aa16.08■□□□□ 0.16
PHF21A-207ENST00000527401 CLSPNQ9HAW4 1339 aa16.05■□□□□ 0.16
PHF21A-207ENST00000527401 TRIM26Q12899 539 aaPredicted RBP15.99■□□□□ 0.15
PHF21A-207ENST00000527401 ZNF316A6NFI3 1004 aaPredicted RBP15.76■□□□□ 0.11
PHF21A-207ENST00000527401 SHROOM4Q9ULL8 1493 aa15.69■□□□□ 0.1
PHF21A-207ENST00000527401 FAM9AQ8IZU1 332 aaPredicted RBP15.68■□□□□ 0.1
PHF21A-207ENST00000527401 DIEXFQ68CQ4 756 aaKnown RBP15.66■□□□□ 0.1
PHF21A-207ENST00000527401 GTF3C3Q9Y5Q9 886 aa15.63■□□□□ 0.09
PHF21A-207ENST00000527401 ACIN1Q9UKV3 1341 aaKnown RBP15.56■□□□□ 0.08
PHF21A-207ENST00000527401 CDK11AQ9UQ88 783 aaPredicted RBP15.56■□□□□ 0.08
PHF21A-207ENST00000527401 ANP32AP39687 249 aaKnown RBP15.45■□□□□ 0.06
PHF21A-207ENST00000527401 EIF5BO60841 1220 aaKnown RBP15.44■□□□□ 0.06
PHF21A-207ENST00000527401 TRIM41Q8WV44 630 aa15.41■□□□□ 0.06
PHF21A-207ENST00000527401 RANGAP1P46060 587 aaPredicted RBP15.39■□□□□ 0.05
PHF21A-207ENST00000527401 EHMT2Q96KQ7 1210 aa15.39■□□□□ 0.05
PHF21A-207ENST00000527401 ANP32BQ92688 251 aaKnown RBP15.33■□□□□ 0.04
PHF21A-207ENST00000527401 PPARGC1BQ86YN6 1023 aaKnown RBP15.27■□□□□ 0.03
PHF21A-207ENST00000527401 TNNT2P45379 298 aaPredicted RBP15.24■□□□□ 0.03
PHF21A-207ENST00000527401 ANP32EQ9BTT0 268 aa15.22■□□□□ 0.03
PHF21A-207ENST00000527401 CCDC180Q9P1Z9 1646 aa15.21■□□□□ 0.03
PHF21A-207ENST00000527401 NCLP19338 710 aaKnown RBP15.18■□□□□ 0.02
PHF21A-207ENST00000527401 BCL11AQ9H165 835 aa15.15■□□□□ 0.02
PHF21A-207ENST00000527401 DCAF1Q9Y4B6 1507 aa15.15■□□□□ 0.02
PHF21A-207ENST00000527401 UBTFP17480 764 aaKnown RBP15.12■□□□□ 0.01
PHF21A-207ENST00000527401 TRIM44Q96DX7 344 aaPredicted RBP15.07■□□□□ 0
PHF21A-207ENST00000527401 SCAF1Q9H7N4 1312 aaKnown RBP15.06■□□□□ 0
PHF21A-207ENST00000527401 ANP32CO43423 234 aa15.05■□□□□ 0
PHF21A-207ENST00000527401 ERICH6BQ5W0A0 696 aa15.03■□□□□ -0
PHF21A-207ENST00000527401 ZBTB47Q9UFB7 747 aaPredicted RBP14.96□□□□□ -0.01
PHF21A-207ENST00000527401 BCANQ96GW7 911 aa14.96□□□□□ -0.01
PHF21A-207ENST00000527401 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.92□□□□□ -0.02
PHF21A-207ENST00000527401 CDK11BP21127 795 aaKnown RBP14.92□□□□□ -0.02
PHF21A-207ENST00000527401 UPF2Q9HAU5 1272 aaKnown RBP14.92□□□□□ -0.02
PHF21A-207ENST00000527401 CHIC1Q5VXU3 224 aa14.88□□□□□ -0.03
PHF21A-207ENST00000527401 DDRGK1Q96HY6 314 aa14.87□□□□□ -0.03
PHF21A-207ENST00000527401 NEUROD1Q13562 356 aa14.83□□□□□ -0.03
PHF21A-207ENST00000527401 NBR1Q14596 966 aa14.82□□□□□ -0.04
PHF21A-207ENST00000527401 FKBP8Q14318 412 aa14.78□□□□□ -0.04
PHF21A-207ENST00000527401 PPM1GO15355 546 aaPredicted RBP14.76□□□□□ -0.05
PHF21A-207ENST00000527401 HSP90AA1P07900 732 aaKnown RBP14.75□□□□□ -0.05
PHF21A-207ENST00000527401 NEFMP07197 916 aa14.74□□□□□ -0.05
PHF21A-207ENST00000527401 BECN1Q14457 450 aa14.71□□□□□ -0.05
PHF21A-207ENST00000527401 HNRNPUL2Q1KMD3 747 aaKnown RBP14.71□□□□□ -0.06
PHF21A-207ENST00000527401 SLC24A1O60721 1099 aa14.69□□□□□ -0.06
PHF21A-207ENST00000527401 ZNF326Q5BKZ1 582 aaKnown RBP14.68□□□□□ -0.06
PHF21A-207ENST00000527401 NPM2Q86SE8 214 aaKnown RBP14.67□□□□□ -0.06
PHF21A-207ENST00000527401 ATP1B4Q9UN42 357 aaPredicted RBP14.67□□□□□ -0.06
PHF21A-207ENST00000527401 LOC105371045A0A1W2PR82 267 aa14.64□□□□□ -0.07
PHF21A-207ENST00000527401 NAP1L5Q96NT1 182 aaPredicted RBP14.64□□□□□ -0.07
PHF21A-207ENST00000527401 CANXP27824 592 aaKnown RBP14.64□□□□□ -0.07
PHF21A-207ENST00000527401 POLR3GLQ9BT43 218 aa14.62□□□□□ -0.07
PHF21A-207ENST00000527401 RSPH6AQ9H0K4 717 aa14.62□□□□□ -0.07
PHF21A-207ENST00000527401 NOP58Q9Y2X3 529 aaKnown RBP14.61□□□□□ -0.07
PHF21A-207ENST00000527401 CCDC136Q96JN2 1154 aa14.61□□□□□ -0.07
PHF21A-207ENST00000527401 GOLGA6L22H0YM25 854 aa14.6□□□□□ -0.07
PHF21A-207ENST00000527401 L1TD1Q5T7N2 865 aaKnown RBP14.6□□□□□ -0.07
PHF21A-207ENST00000527401 ARID4BQ4LE39 1312 aaPredicted RBP14.59□□□□□ -0.07
PHF21A-207ENST00000527401 PTMSP20962 102 aa14.58□□□□□ -0.08
PHF21A-207ENST00000527401 DEKP35659 375 aaKnown RBP14.55□□□□□ -0.08
PHF21A-207ENST00000527401 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.52□□□□□ -0.08
PHF21A-207ENST00000527401 CHAF1AQ13111 956 aaPredicted RBP14.51□□□□□ -0.09
PHF21A-207ENST00000527401 ITGAEP38570 1179 aa14.48□□□□□ -0.09
PHF21A-207ENST00000527401 HNRNPUQ00839 825 aaKnown RBP eCLIP14.46□□□□□ -0.09
PHF21A-207ENST00000527401 USP35Q9P2H5 1018 aa14.44□□□□□ -0.1
PHF21A-207ENST00000527401 CNGB1Q14028 1251 aaPredicted RBP14.42□□□□□ -0.1
PHF21A-207ENST00000527401 DNTTIP2Q5QJE6 756 aaKnown RBP14.41□□□□□ -0.1
PHF21A-207ENST00000527401 MSNP26038 577 aaKnown RBP14.41□□□□□ -0.1
PHF21A-207ENST00000527401 HSP90AA2PQ14568 343 aaPredicted RBP14.41□□□□□ -0.1
PHF21A-207ENST00000527401 PTMAP06454 111 aaKnown RBP14.37□□□□□ -0.11
PHF21A-207ENST00000527401 PNNQ9H307 717 aaKnown RBP14.37□□□□□ -0.11
PHF21A-207ENST00000527401 SUPT16HQ9Y5B9 1047 aaKnown RBP14.37□□□□□ -0.11
PHF21A-207ENST00000527401 GOLGA6L6A8MZA4 724 aa14.35□□□□□ -0.11
PHF21A-207ENST00000527401 RTN4Q9NQC3 1192 aaKnown RBP14.35□□□□□ -0.11
PHF21A-207ENST00000527401 TONSLQ96HA7 1378 aa14.34□□□□□ -0.11
PHF21A-207ENST00000527401 PPP4R2Q9NY27 417 aa14.33□□□□□ -0.12
PHF21A-207ENST00000527401 NRDCO43847 1150 aa14.32□□□□□ -0.12
PHF21A-207ENST00000527401 TNNT3P45378 269 aaPredicted RBP14.32□□□□□ -0.12
PHF21A-207ENST00000527401 CSRNP3Q8WYN3 585 aa14.32□□□□□ -0.12
PHF21A-207ENST00000527401 LAS1LQ9Y4W2 734 aaKnown RBP14.31□□□□□ -0.12
PHF21A-207ENST00000527401 ARXQ96QS3 562 aa14.3□□□□□ -0.12
PHF21A-207ENST00000527401 MIER1Q8N108 512 aa14.3□□□□□ -0.12
PHF21A-207ENST00000527401 PRKCSHP14314 528 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms