RNA–Protein interactions for RNA: ENST00000495990.5

TRABD2A-209, Transcript of TraB domain containing 2A, humanhuman

TSL 1 (best)

Gene TRABD2A, Length 3,060 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2A-209ENST00000495990 CHIC1Q5VXU3 224 aa19.92■□□□□ 0.78
TRABD2A-209ENST00000495990 SLC24A1O60721 1099 aa19.21■□□□□ 0.67
TRABD2A-209ENST00000495990 AEBP2Q6ZN18 517 aaPredicted RBP19.06■□□□□ 0.64
TRABD2A-209ENST00000495990 EHMT2Q96KQ7 1210 aa18.94■□□□□ 0.62
TRABD2A-209ENST00000495990 PLPPR3Q6T4P5 718 aa18.18■□□□□ 0.5
TRABD2A-209ENST00000495990 PHF23Q9BUL5 403 aaPredicted RBP18.12■□□□□ 0.49
TRABD2A-209ENST00000495990 RTN4Q9NQC3 1192 aaKnown RBP17.85■□□□□ 0.45
TRABD2A-209ENST00000495990 KCNA4P22459 653 aa17.46■□□□□ 0.38
TRABD2A-209ENST00000495990 CSRNP3Q8WYN3 585 aa17.45■□□□□ 0.38
TRABD2A-209ENST00000495990 AMER1Q5JTC6 1135 aaPredicted RBP17.12■□□□□ 0.33
TRABD2A-209ENST00000495990 PRKCSHP14314 528 aaPredicted RBP17.05■□□□□ 0.32
TRABD2A-209ENST00000495990 NCBP3Q53F19 620 aaKnown RBP16.98■□□□□ 0.31
TRABD2A-209ENST00000495990 DAXXQ9UER7 740 aaPredicted RBP16.88■□□□□ 0.29
TRABD2A-209ENST00000495990 SLC4A1APQ9BWU0 796 aaKnown RBP16.68■□□□□ 0.26
TRABD2A-209ENST00000495990 ADRA2BP18089 450 aa16.51■□□□□ 0.23
TRABD2A-209ENST00000495990 TIMELESSQ9UNS1 1208 aa16.42■□□□□ 0.22
TRABD2A-209ENST00000495990 TAOK2Q9UL54 1235 aa16.27■□□□□ 0.19
TRABD2A-209ENST00000495990 TULP1O00294 542 aaPredicted RBP16.24■□□□□ 0.19
TRABD2A-209ENST00000495990 ZBTB22O15209 634 aa16.21■□□□□ 0.19
TRABD2A-209ENST00000495990 TPRNQ4KMQ1 711 aa16.14■□□□□ 0.17
TRABD2A-209ENST00000495990 ARXQ96QS3 562 aa16.03■□□□□ 0.16
TRABD2A-209ENST00000495990 BCANQ96GW7 911 aa15.99■□□□□ 0.15
TRABD2A-209ENST00000495990 HAP1P54257 671 aaPredicted RBP15.93■□□□□ 0.14
TRABD2A-209ENST00000495990 PLCB2Q00722 1185 aa15.91■□□□□ 0.14
TRABD2A-209ENST00000495990 FKBP8Q14318 412 aa15.73■□□□□ 0.11
TRABD2A-209ENST00000495990 HOMEZQ8IX15 550 aa15.68■□□□□ 0.1
TRABD2A-209ENST00000495990 NPM3O75607 178 aaKnown RBP15.66■□□□□ 0.1
TRABD2A-209ENST00000495990 RANGAP1P46060 587 aaPredicted RBP15.62■□□□□ 0.09
TRABD2A-209ENST00000495990 PODXL2Q9NZ53 605 aa15.61■□□□□ 0.09
TRABD2A-209ENST00000495990 GTF3C3Q9Y5Q9 886 aa15.59■□□□□ 0.09
TRABD2A-209ENST00000495990 PPP6R1Q9UPN7 881 aa15.59■□□□□ 0.09
TRABD2A-209ENST00000495990 KLHL34Q8N239 644 aa15.57■□□□□ 0.08
TRABD2A-209ENST00000495990 APLP2Q06481 763 aa15.46■□□□□ 0.07
TRABD2A-209ENST00000495990 DCAF8L2P0C7V8 631 aa15.4■□□□□ 0.06
TRABD2A-209ENST00000495990 FBLN2P98095 1184 aa15.37■□□□□ 0.05
TRABD2A-209ENST00000495990 KDM2AQ9Y2K7 1162 aa15.37■□□□□ 0.05
TRABD2A-209ENST00000495990 PPP4R3CPQ6ZMV5 832 aa15.34■□□□□ 0.05
TRABD2A-209ENST00000495990 SENP3Q9H4L4 574 aaPredicted RBP15.28■□□□□ 0.04
TRABD2A-209ENST00000495990 TMEM132AQ24JP5 1023 aa15.23■□□□□ 0.03
TRABD2A-209ENST00000495990 C14orf37Q86TY3 774 aa15.22■□□□□ 0.03
TRABD2A-209ENST00000495990 ERICH6Q7L0X2 663 aa15.21■□□□□ 0.03
TRABD2A-209ENST00000495990 PELP1Q8IZL8 1130 aaKnown RBP15.2■□□□□ 0.02
TRABD2A-209ENST00000495990 VSIG10Q8N0Z9 540 aa15.19■□□□□ 0.02
TRABD2A-209ENST00000495990 SUPT5HO00267 1087 aaKnown RBP15.19■□□□□ 0.02
TRABD2A-209ENST00000495990 NPM2Q86SE8 214 aaKnown RBP15.1■□□□□ 0.01
TRABD2A-209ENST00000495990 FOXD4L1Q9NU39 408 aa15.08■□□□□ 0.01
TRABD2A-209ENST00000495990 TRIM26Q12899 539 aaPredicted RBP15□□□□□ -0.01
TRABD2A-209ENST00000495990 TTBK1Q5TCY1 1321 aaPredicted RBP14.97□□□□□ -0.01
TRABD2A-209ENST00000495990 UBTFP17480 764 aaKnown RBP14.94□□□□□ -0.02
TRABD2A-209ENST00000495990 CFAP44Q96MT7 982 aa14.83□□□□□ -0.04
TRABD2A-209ENST00000495990 EIF5BO60841 1220 aaKnown RBP14.81□□□□□ -0.04
TRABD2A-209ENST00000495990 PAXIP1Q6ZW49 1069 aaPredicted RBP14.79□□□□□ -0.04
TRABD2A-209ENST00000495990 MYT1Q01538 1121 aa14.76□□□□□ -0.05
TRABD2A-209ENST00000495990 HRCP23327 699 aa14.76□□□□□ -0.05
TRABD2A-209ENST00000495990 TSHZ2Q9NRE2 1034 aa14.71□□□□□ -0.06
TRABD2A-209ENST00000495990 NBR1Q14596 966 aa14.65□□□□□ -0.06
TRABD2A-209ENST00000495990 LOC105371045A0A1W2PR82 267 aa14.61□□□□□ -0.07
TRABD2A-209ENST00000495990 NPM1P06748 294 aaKnown RBP eCLIP14.56□□□□□ -0.08
TRABD2A-209ENST00000495990 PLEKHG5O94827 1062 aa14.54□□□□□ -0.08
TRABD2A-209ENST00000495990 FBXO3Q9UK99 471 aa14.52□□□□□ -0.08
TRABD2A-209ENST00000495990 PKD2Q13563 968 aa14.52□□□□□ -0.09
TRABD2A-209ENST00000495990 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.5□□□□□ -0.09
TRABD2A-209ENST00000495990 TRHP20396 242 aaPredicted RBP14.46□□□□□ -0.09
TRABD2A-209ENST00000495990 ARID3AQ99856 593 aa14.44□□□□□ -0.1
TRABD2A-209ENST00000495990 FOXD1Q16676 465 aa14.38□□□□□ -0.11
TRABD2A-209ENST00000495990 BBXQ8WY36 941 aaPredicted RBP14.32□□□□□ -0.12
TRABD2A-209ENST00000495990 IFNLR1Q8IU57 520 aaPredicted RBP14.31□□□□□ -0.12
TRABD2A-209ENST00000495990 CNKSR2Q8WXI2 1034 aa14.24□□□□□ -0.13
TRABD2A-209ENST00000495990 SPRYD3Q8NCJ5 442 aa14.22□□□□□ -0.13
TRABD2A-209ENST00000495990 IGSF3O75054 1194 aa14.18□□□□□ -0.14
TRABD2A-209ENST00000495990 VASPP50552 380 aaPredicted RBP14.17□□□□□ -0.14
TRABD2A-209ENST00000495990 SLC4A2P04920 1241 aa14.12□□□□□ -0.15
TRABD2A-209ENST00000495990 BRPF1P55201 1214 aaPredicted RBP14.12□□□□□ -0.15
TRABD2A-209ENST00000495990 PIAS4Q8N2W9 510 aaPredicted RBP14.05□□□□□ -0.16
TRABD2A-209ENST00000495990 NECTIN2Q92692 538 aa14.04□□□□□ -0.16
TRABD2A-209ENST00000495990 CCDC9Q9Y3X0 531 aaKnown RBP14.03□□□□□ -0.16
TRABD2A-209ENST00000495990 RGL2O15211 777 aa14.01□□□□□ -0.17
TRABD2A-209ENST00000495990 C1orf115Q9H7X2 142 aa14.01□□□□□ -0.17
TRABD2A-209ENST00000495990 ECM2O94769 699 aaPredicted RBP14.01□□□□□ -0.17
TRABD2A-209ENST00000495990 CHMP4AQ9BY43 222 aa14□□□□□ -0.17
TRABD2A-209ENST00000495990 ARID3CA6NKF2 412 aa13.99□□□□□ -0.17
TRABD2A-209ENST00000495990 ATF5Q9Y2D1 282 aaPredicted RBP13.96□□□□□ -0.17
TRABD2A-209ENST00000495990 DNAJC5Q9H3Z4 198 aa13.94□□□□□ -0.18
TRABD2A-209ENST00000495990 ATXN8OSP0DMR3 200 aa13.93□□□□□ -0.18
TRABD2A-209ENST00000495990 NEUROD2Q15784 382 aa13.93□□□□□ -0.18
TRABD2A-209ENST00000495990 CHGAP10645 457 aaKnown RBP13.92□□□□□ -0.18
TRABD2A-209ENST00000495990 CDK11BP21127 795 aaKnown RBP13.91□□□□□ -0.18
TRABD2A-209ENST00000495990 ZNF428Q96B54 188 aa13.91□□□□□ -0.18
TRABD2A-209ENST00000495990 CDK11AQ9UQ88 783 aaPredicted RBP13.91□□□□□ -0.18
TRABD2A-209ENST00000495990 ZBTB7CA1YPR0 619 aa13.87□□□□□ -0.19
TRABD2A-209ENST00000495990 MAPK8IP2Q13387 824 aaPredicted RBP13.86□□□□□ -0.19
TRABD2A-209ENST00000495990 DHX37Q8IY37 1157 aaKnown RBP13.84□□□□□ -0.19
TRABD2A-209ENST00000495990 MYCNP04198 464 aaPredicted RBP13.82□□□□□ -0.2
TRABD2A-209ENST00000495990 SAMD1Q6SPF0 538 aaPredicted RBP13.82□□□□□ -0.2
TRABD2A-209ENST00000495990 PDIA4P13667 645 aaKnown RBP13.77□□□□□ -0.2
TRABD2A-209ENST00000495990 ZMYND15Q9H091 742 aa13.77□□□□□ -0.21
TRABD2A-209ENST00000495990 RSPH6AQ9H0K4 717 aa13.75□□□□□ -0.21
TRABD2A-209ENST00000495990 SHROOM4Q9ULL8 1493 aa13.75□□□□□ -0.21
TRABD2A-209ENST00000495990 LMOD2Q6P5Q4 547 aa13.72□□□□□ -0.21
TRABD2A-209ENST00000495990 KCTD17Q8N5Z5 321 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms