RNA–Protein interactions for RNA: ENST00000494171.5

ALS2CR12-209, Transcript of amyotrophic lateral sclerosis 2 chromosome region 12, humanhuman

TSL 2

Gene ALS2CR12, Length 2,075 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALS2CR12-209ENST00000494171 CHIC1Q5VXU3 224 aa12.69□□□□□ -0.38
ALS2CR12-209ENST00000494171 AEBP2Q6ZN18 517 aaPredicted RBP12.3□□□□□ -0.44
ALS2CR12-209ENST00000494171 PHF23Q9BUL5 403 aaPredicted RBP11.27□□□□□ -0.61
ALS2CR12-209ENST00000494171 PLPPR3Q6T4P5 718 aa10.62□□□□□ -0.71
ALS2CR12-209ENST00000494171 EHMT2Q96KQ7 1210 aa10.36□□□□□ -0.75
ALS2CR12-209ENST00000494171 SENP3Q9H4L4 574 aaPredicted RBP10.27□□□□□ -0.77
ALS2CR12-209ENST00000494171 KCNA4P22459 653 aa10.12□□□□□ -0.79
ALS2CR12-209ENST00000494171 ADRA2BP18089 450 aa9.98□□□□□ -0.81
ALS2CR12-209ENST00000494171 CSRNP3Q8WYN3 585 aa9.87□□□□□ -0.83
ALS2CR12-209ENST00000494171 SLC24A1O60721 1099 aa9.77□□□□□ -0.85
ALS2CR12-209ENST00000494171 SLC4A1APQ9BWU0 796 aaKnown RBP9.75□□□□□ -0.85
ALS2CR12-209ENST00000494171 PPP6R1Q9UPN7 881 aa9.71□□□□□ -0.85
ALS2CR12-209ENST00000494171 PPP4R3CPQ6ZMV5 832 aa9.47□□□□□ -0.89
ALS2CR12-209ENST00000494171 FOXD1Q16676 465 aa9.47□□□□□ -0.89
ALS2CR12-209ENST00000494171 NCBP3Q53F19 620 aaKnown RBP9.41□□□□□ -0.9
ALS2CR12-209ENST00000494171 RTN4Q9NQC3 1192 aaKnown RBP9.41□□□□□ -0.9
ALS2CR12-209ENST00000494171 AMER1Q5JTC6 1135 aaPredicted RBP9.36□□□□□ -0.91
ALS2CR12-209ENST00000494171 ZBTB22O15209 634 aa9.33□□□□□ -0.92
ALS2CR12-209ENST00000494171 NPM3O75607 178 aaKnown RBP9.31□□□□□ -0.92
ALS2CR12-209ENST00000494171 PIAS4Q8N2W9 510 aaPredicted RBP9.11□□□□□ -0.95
ALS2CR12-209ENST00000494171 FOXD4L1Q9NU39 408 aa9.07□□□□□ -0.96
ALS2CR12-209ENST00000494171 CNKSR2Q8WXI2 1034 aa9.03□□□□□ -0.96
ALS2CR12-209ENST00000494171 FKBP8Q14318 412 aa8.89□□□□□ -0.99
ALS2CR12-209ENST00000494171 DNAJC5BQ9UF47 199 aa8.86□□□□□ -0.99
ALS2CR12-209ENST00000494171 SCAF1Q9H7N4 1312 aaKnown RBP8.85□□□□□ -0.99
ALS2CR12-209ENST00000494171 RNF216Q9NWF9 866 aaPredicted RBP8.66□□□□□ -1.02
ALS2CR12-209ENST00000494171 ATXN8OSP0DMR3 200 aa8.66□□□□□ -1.02
ALS2CR12-209ENST00000494171 MAPK8IP2Q13387 824 aaPredicted RBP8.63□□□□□ -1.03
ALS2CR12-209ENST00000494171 PLCB2Q00722 1185 aa8.62□□□□□ -1.03
ALS2CR12-209ENST00000494171 SLC4A2P04920 1241 aa8.61□□□□□ -1.03
ALS2CR12-209ENST00000494171 PRKCSHP14314 528 aaPredicted RBP8.61□□□□□ -1.03
ALS2CR12-209ENST00000494171 MYCNP04198 464 aaPredicted RBP8.57□□□□□ -1.04
ALS2CR12-209ENST00000494171 BCANQ96GW7 911 aa8.53□□□□□ -1.04
ALS2CR12-209ENST00000494171 HAP1P54257 671 aaPredicted RBP8.52□□□□□ -1.05
ALS2CR12-209ENST00000494171 TAOK2Q9UL54 1235 aa8.48□□□□□ -1.05
ALS2CR12-209ENST00000494171 HOXD11P31277 338 aaPredicted RBP8.43□□□□□ -1.06
ALS2CR12-209ENST00000494171 DAXXQ9UER7 740 aaPredicted RBP8.41□□□□□ -1.06
ALS2CR12-209ENST00000494171 MSH5O43196 834 aa8.4□□□□□ -1.06
ALS2CR12-209ENST00000494171 VSIG10Q8N0Z9 540 aa8.37□□□□□ -1.07
ALS2CR12-209ENST00000494171 DCAF8L2P0C7V8 631 aa8.36□□□□□ -1.07
ALS2CR12-209ENST00000494171 TPRNQ4KMQ1 711 aa8.35□□□□□ -1.07
ALS2CR12-209ENST00000494171 ATF5Q9Y2D1 282 aaPredicted RBP8.33□□□□□ -1.08
ALS2CR12-209ENST00000494171 FBXO3Q9UK99 471 aa8.32□□□□□ -1.08
ALS2CR12-209ENST00000494171 DMRT2Q9Y5R5 561 aa8.32□□□□□ -1.08
ALS2CR12-209ENST00000494171 TIMELESSQ9UNS1 1208 aa8.26□□□□□ -1.09
ALS2CR12-209ENST00000494171 KDM2AQ9Y2K7 1162 aa8.23□□□□□ -1.09
ALS2CR12-209ENST00000494171 VASPP50552 380 aaPredicted RBP8.22□□□□□ -1.09
ALS2CR12-209ENST00000494171 TULP1O00294 542 aaPredicted RBP8.18□□□□□ -1.1
ALS2CR12-209ENST00000494171 FBLN2P98095 1184 aa8.18□□□□□ -1.1
ALS2CR12-209ENST00000494171 PKD2Q13563 968 aa8.18□□□□□ -1.1
ALS2CR12-209ENST00000494171 ARXQ96QS3 562 aa8.18□□□□□ -1.1
ALS2CR12-209ENST00000494171 IFNLR1Q8IU57 520 aaPredicted RBP8.17□□□□□ -1.1
ALS2CR12-209ENST00000494171 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.16□□□□□ -1.1
ALS2CR12-209ENST00000494171 SPDYE4A6NLX3 237 aa8.15□□□□□ -1.1
ALS2CR12-209ENST00000494171 SAMD1Q6SPF0 538 aaPredicted RBP8.14□□□□□ -1.11
ALS2CR12-209ENST00000494171 BBXQ8WY36 941 aaPredicted RBP8.13□□□□□ -1.11
ALS2CR12-209ENST00000494171 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.12□□□□□ -1.11
ALS2CR12-209ENST00000494171 HNRNPUL2Q1KMD3 747 aaKnown RBP8.12□□□□□ -1.11
ALS2CR12-209ENST00000494171 PAXIP1Q6ZW49 1069 aaPredicted RBP8.12□□□□□ -1.11
ALS2CR12-209ENST00000494171 CFAP44Q96MT7 982 aa8.1□□□□□ -1.11
ALS2CR12-209ENST00000494171 PROM2Q8N271 834 aa8.1□□□□□ -1.11
ALS2CR12-209ENST00000494171 ZNF219Q9P2Y4 722 aaPredicted RBP8.07□□□□□ -1.12
ALS2CR12-209ENST00000494171 NPM1P06748 294 aaKnown RBP eCLIP8.06□□□□□ -1.12
ALS2CR12-209ENST00000494171 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.06□□□□□ -1.12
ALS2CR12-209ENST00000494171 GTF3C3Q9Y5Q9 886 aa8.02□□□□□ -1.12
ALS2CR12-209ENST00000494171 TSHZ2Q9NRE2 1034 aa8.02□□□□□ -1.13
ALS2CR12-209ENST00000494171 U3KPZ7 1027 aaPredicted RBP8.02□□□□□ -1.13
ALS2CR12-209ENST00000494171 ECM2O94769 699 aaPredicted RBP8□□□□□ -1.13
ALS2CR12-209ENST00000494171 MKRN4PQ13434 485 aaPredicted RBP7.99□□□□□ -1.13
ALS2CR12-209ENST00000494171 SPRYD3Q8NCJ5 442 aa7.99□□□□□ -1.13
ALS2CR12-209ENST00000494171 NBR1Q14596 966 aa7.97□□□□□ -1.13
ALS2CR12-209ENST00000494171 DCAF8L1A6NGE4 600 aa7.96□□□□□ -1.13
ALS2CR12-209ENST00000494171 HOMEZQ8IX15 550 aa7.96□□□□□ -1.13
ALS2CR12-209ENST00000494171 ERICH6Q7L0X2 663 aa7.94□□□□□ -1.14
ALS2CR12-209ENST00000494171 SPOCK2Q92563 424 aa7.93□□□□□ -1.14
ALS2CR12-209ENST00000494171 KLHL34Q8N239 644 aa7.91□□□□□ -1.14
ALS2CR12-209ENST00000494171 RGL2O15211 777 aa7.91□□□□□ -1.14
ALS2CR12-209ENST00000494171 DNAJC5Q9H3Z4 198 aa7.88□□□□□ -1.15
ALS2CR12-209ENST00000494171 TMEM132AQ24JP5 1023 aa7.86□□□□□ -1.15
ALS2CR12-209ENST00000494171 APLP2Q06481 763 aa7.85□□□□□ -1.15
ALS2CR12-209ENST00000494171 CHGAP10645 457 aaKnown RBP7.83□□□□□ -1.16
ALS2CR12-209ENST00000494171 C14orf37Q86TY3 774 aa7.8□□□□□ -1.16
ALS2CR12-209ENST00000494171 RANGAP1P46060 587 aaPredicted RBP7.74□□□□□ -1.17
ALS2CR12-209ENST00000494171 PODXL2Q9NZ53 605 aa7.74□□□□□ -1.17
ALS2CR12-209ENST00000494171 PLCD3Q8N3E9 789 aa7.73□□□□□ -1.17
ALS2CR12-209ENST00000494171 POTEDQ86YR6 584 aa7.72□□□□□ -1.17
ALS2CR12-209ENST00000494171 CIZ1Q9ULV3 898 aaPredicted RBP7.71□□□□□ -1.17
ALS2CR12-209ENST00000494171 STAG3Q9UJ98 1225 aa7.71□□□□□ -1.18
ALS2CR12-209ENST00000494171 POLA2Q14181 598 aa7.7□□□□□ -1.18
ALS2CR12-209ENST00000494171 HS6ST3Q8IZP7 471 aa7.7□□□□□ -1.18
ALS2CR12-209ENST00000494171 TRHP20396 242 aaPredicted RBP7.67□□□□□ -1.18
ALS2CR12-209ENST00000494171 MIER1Q8N108 512 aa7.66□□□□□ -1.18
ALS2CR12-209ENST00000494171 SUPT5HO00267 1087 aaKnown RBP7.64□□□□□ -1.19
ALS2CR12-209ENST00000494171 NKX1-1Q15270 411 aaPredicted RBP7.61□□□□□ -1.19
ALS2CR12-209ENST00000494171 TRIM41Q8WV44 630 aa7.61□□□□□ -1.19
ALS2CR12-209ENST00000494171 GTPBP6O43824 516 aaPredicted RBP7.59□□□□□ -1.19
ALS2CR12-209ENST00000494171 SPINK5Q9NQ38 1064 aaPredicted RBP7.59□□□□□ -1.19
ALS2CR12-209ENST00000494171 ZBTB12Q9Y330 459 aaPredicted RBP7.58□□□□□ -1.2
ALS2CR12-209ENST00000494171 RNF25Q96BH1 459 aaPredicted RBP7.57□□□□□ -1.2
ALS2CR12-209ENST00000494171 ZNF692Q9BU19 519 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms