RNA–Protein interactions for RNA: ENST00000475990.5

CBWD1-213, Transcript of COBW domain containing 1, humanhuman

TSL 3

Gene CBWD1, Length 2,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-213ENST00000475990 SLC24A1O60721 1099 aa11.53□□□□□ -0.56
CBWD1-213ENST00000475990 CHIC1Q5VXU3 224 aa11.26□□□□□ -0.61
CBWD1-213ENST00000475990 AEBP2Q6ZN18 517 aaPredicted RBP11.18□□□□□ -0.62
CBWD1-213ENST00000475990 POTEDQ86YR6 584 aa10.9□□□□□ -0.66
CBWD1-213ENST00000475990 EHMT2Q96KQ7 1210 aa10.84□□□□□ -0.67
CBWD1-213ENST00000475990 PLPPR3Q6T4P5 718 aa10.5□□□□□ -0.73
CBWD1-213ENST00000475990 RTN4Q9NQC3 1192 aaKnown RBP10.43□□□□□ -0.74
CBWD1-213ENST00000475990 DAXXQ9UER7 740 aaPredicted RBP10.38□□□□□ -0.75
CBWD1-213ENST00000475990 NCBP3Q53F19 620 aaKnown RBP10.29□□□□□ -0.76
CBWD1-213ENST00000475990 AMER1Q5JTC6 1135 aaPredicted RBP10.22□□□□□ -0.77
CBWD1-213ENST00000475990 PHF23Q9BUL5 403 aaPredicted RBP10.15□□□□□ -0.79
CBWD1-213ENST00000475990 KCNA4P22459 653 aa10.11□□□□□ -0.79
CBWD1-213ENST00000475990 CSRNP3Q8WYN3 585 aa10.09□□□□□ -0.79
CBWD1-213ENST00000475990 PRKCSHP14314 528 aaPredicted RBP9.97□□□□□ -0.81
CBWD1-213ENST00000475990 ARXQ96QS3 562 aa9.84□□□□□ -0.83
CBWD1-213ENST00000475990 TTBK1Q5TCY1 1321 aaPredicted RBP9.79□□□□□ -0.84
CBWD1-213ENST00000475990 TIMELESSQ9UNS1 1208 aa9.75□□□□□ -0.85
CBWD1-213ENST00000475990 APLP2Q06481 763 aa9.75□□□□□ -0.85
CBWD1-213ENST00000475990 PELP1Q8IZL8 1130 aaKnown RBP9.72□□□□□ -0.85
CBWD1-213ENST00000475990 MYT1Q01538 1121 aa9.68□□□□□ -0.86
CBWD1-213ENST00000475990 TAOK2Q9UL54 1235 aa9.66□□□□□ -0.86
CBWD1-213ENST00000475990 ERICH6Q7L0X2 663 aa9.63□□□□□ -0.87
CBWD1-213ENST00000475990 TULP1O00294 542 aaPredicted RBP9.61□□□□□ -0.87
CBWD1-213ENST00000475990 SLC4A1APQ9BWU0 796 aaKnown RBP9.6□□□□□ -0.87
CBWD1-213ENST00000475990 BCANQ96GW7 911 aa9.56□□□□□ -0.88
CBWD1-213ENST00000475990 RANGAP1P46060 587 aaPredicted RBP9.55□□□□□ -0.88
CBWD1-213ENST00000475990 HOMEZQ8IX15 550 aa9.53□□□□□ -0.88
CBWD1-213ENST00000475990 TPRNQ4KMQ1 711 aa9.51□□□□□ -0.89
CBWD1-213ENST00000475990 PLCB2Q00722 1185 aa9.4□□□□□ -0.9
CBWD1-213ENST00000475990 SENP3Q9H4L4 574 aaPredicted RBP9.36□□□□□ -0.91
CBWD1-213ENST00000475990 GTF3C3Q9Y5Q9 886 aa9.34□□□□□ -0.91
CBWD1-213ENST00000475990 KLHL34Q8N239 644 aa9.34□□□□□ -0.91
CBWD1-213ENST00000475990 PODXL2Q9NZ53 605 aa9.34□□□□□ -0.91
CBWD1-213ENST00000475990 HAP1P54257 671 aaPredicted RBP9.32□□□□□ -0.92
CBWD1-213ENST00000475990 ZBTB22O15209 634 aa9.22□□□□□ -0.93
CBWD1-213ENST00000475990 ADRA2BP18089 450 aa9.18□□□□□ -0.94
CBWD1-213ENST00000475990 EIF5BO60841 1220 aaKnown RBP9.17□□□□□ -0.94
CBWD1-213ENST00000475990 TMEM132AQ24JP5 1023 aa9.12□□□□□ -0.95
CBWD1-213ENST00000475990 NPM2Q86SE8 214 aaKnown RBP9.12□□□□□ -0.95
CBWD1-213ENST00000475990 VSIG10Q8N0Z9 540 aa9.1□□□□□ -0.95
CBWD1-213ENST00000475990 C14orf37Q86TY3 774 aa9.07□□□□□ -0.96
CBWD1-213ENST00000475990 FKBP8Q14318 412 aa9.04□□□□□ -0.96
CBWD1-213ENST00000475990 KDM2AQ9Y2K7 1162 aa8.99□□□□□ -0.97
CBWD1-213ENST00000475990 FBXO3Q9UK99 471 aa8.98□□□□□ -0.97
CBWD1-213ENST00000475990 TRIM26Q12899 539 aaPredicted RBP8.94□□□□□ -0.98
CBWD1-213ENST00000475990 SUPT5HO00267 1087 aaKnown RBP8.91□□□□□ -0.98
CBWD1-213ENST00000475990 NPM3O75607 178 aaKnown RBP8.9□□□□□ -0.98
CBWD1-213ENST00000475990 FBLN2P98095 1184 aa8.9□□□□□ -0.98
CBWD1-213ENST00000475990 PLEKHG5O94827 1062 aa8.82□□□□□ -1
CBWD1-213ENST00000475990 UBTFP17480 764 aaKnown RBP8.82□□□□□ -1
CBWD1-213ENST00000475990 HRCP23327 699 aa8.81□□□□□ -1
CBWD1-213ENST00000475990 DCAF8L2P0C7V8 631 aa8.81□□□□□ -1
CBWD1-213ENST00000475990 LOC105371045A0A1W2PR82 267 aa8.78□□□□□ -1
CBWD1-213ENST00000475990 FOXD1Q16676 465 aa8.77□□□□□ -1.01
CBWD1-213ENST00000475990 PPP4R3CPQ6ZMV5 832 aa8.7□□□□□ -1.02
CBWD1-213ENST00000475990 FOXD4L1Q9NU39 408 aa8.69□□□□□ -1.02
CBWD1-213ENST00000475990 NBR1Q14596 966 aa8.63□□□□□ -1.03
CBWD1-213ENST00000475990 PPP6R1Q9UPN7 881 aa8.61□□□□□ -1.03
CBWD1-213ENST00000475990 PAXIP1Q6ZW49 1069 aaPredicted RBP8.59□□□□□ -1.03
CBWD1-213ENST00000475990 CFAP44Q96MT7 982 aa8.57□□□□□ -1.04
CBWD1-213ENST00000475990 TSHZ2Q9NRE2 1034 aa8.54□□□□□ -1.04
CBWD1-213ENST00000475990 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.54□□□□□ -1.04
CBWD1-213ENST00000475990 CHMP4AQ9BY43 222 aa8.52□□□□□ -1.05
CBWD1-213ENST00000475990 CDK11BP21127 795 aaKnown RBP8.51□□□□□ -1.05
CBWD1-213ENST00000475990 CDK11AQ9UQ88 783 aaPredicted RBP8.51□□□□□ -1.05
CBWD1-213ENST00000475990 SHROOM4Q9ULL8 1493 aa8.51□□□□□ -1.05
CBWD1-213ENST00000475990 PDIA4P13667 645 aaKnown RBP8.5□□□□□ -1.05
CBWD1-213ENST00000475990 CCDC9Q9Y3X0 531 aaKnown RBP8.49□□□□□ -1.05
CBWD1-213ENST00000475990 IGSF3O75054 1194 aa8.48□□□□□ -1.05
CBWD1-213ENST00000475990 BBXQ8WY36 941 aaPredicted RBP8.48□□□□□ -1.05
CBWD1-213ENST00000475990 CNKSR2Q8WXI2 1034 aa8.46□□□□□ -1.06
CBWD1-213ENST00000475990 SAMD1Q6SPF0 538 aaPredicted RBP8.45□□□□□ -1.06
CBWD1-213ENST00000475990 NPM1P06748 294 aaKnown RBP eCLIP8.43□□□□□ -1.06
CBWD1-213ENST00000475990 PKD2Q13563 968 aa8.41□□□□□ -1.06
CBWD1-213ENST00000475990 HMGB1P09429 215 aaKnown RBP8.4□□□□□ -1.07
CBWD1-213ENST00000475990 HSP90B1P14625 803 aaKnown RBP8.39□□□□□ -1.07
CBWD1-213ENST00000475990 UBE2Q2Q8WVN8 375 aa8.38□□□□□ -1.07
CBWD1-213ENST00000475990 ARID3AQ99856 593 aa8.38□□□□□ -1.07
CBWD1-213ENST00000475990 ZBTB7CA1YPR0 619 aa8.36□□□□□ -1.07
CBWD1-213ENST00000475990 TRHP20396 242 aaPredicted RBP8.35□□□□□ -1.07
CBWD1-213ENST00000475990 BCL11AQ9H165 835 aa8.35□□□□□ -1.07
CBWD1-213ENST00000475990 DHX37Q8IY37 1157 aaKnown RBP8.34□□□□□ -1.07
CBWD1-213ENST00000475990 SPRYD3Q8NCJ5 442 aa8.34□□□□□ -1.07
CBWD1-213ENST00000475990 DNAJC5Q9H3Z4 198 aa8.34□□□□□ -1.07
CBWD1-213ENST00000475990 BRD2P25440 801 aaKnown RBP8.32□□□□□ -1.08
CBWD1-213ENST00000475990 NECTIN2Q92692 538 aa8.32□□□□□ -1.08
CBWD1-213ENST00000475990 BRPF1P55201 1214 aaPredicted RBP8.31□□□□□ -1.08
CBWD1-213ENST00000475990 PUS7Q96PZ0 661 aaKnown RBP8.28□□□□□ -1.08
CBWD1-213ENST00000475990 PDE4CQ08493 712 aa8.25□□□□□ -1.09
CBWD1-213ENST00000475990 PIAS4Q8N2W9 510 aaPredicted RBP8.24□□□□□ -1.09
CBWD1-213ENST00000475990 ZMYND15Q9H091 742 aa8.24□□□□□ -1.09
CBWD1-213ENST00000475990 IFNLR1Q8IU57 520 aaPredicted RBP8.24□□□□□ -1.09
CBWD1-213ENST00000475990 RSPH6AQ9H0K4 717 aa8.24□□□□□ -1.09
CBWD1-213ENST00000475990 C1orf115Q9H7X2 142 aa8.24□□□□□ -1.09
CBWD1-213ENST00000475990 MSH5O43196 834 aa8.22□□□□□ -1.09
CBWD1-213ENST00000475990 FAM9AQ8IZU1 332 aaPredicted RBP8.22□□□□□ -1.09
CBWD1-213ENST00000475990 TAF7LQ5H9L4 462 aa8.2□□□□□ -1.1
CBWD1-213ENST00000475990 VASPP50552 380 aaPredicted RBP8.19□□□□□ -1.1
CBWD1-213ENST00000475990 POLR3GLQ9BT43 218 aa8.18□□□□□ -1.1
CBWD1-213ENST00000475990 ATXN8OSP0DMR3 200 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms