RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 MLLT10P55197 1068 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 KCNAB2Q13303 367 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 MTA1Q13330 715 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 SPIDRQ14159 915 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 USP39Q53GS9 565 aaKnown RBP16.43■□□□□ 0.22
PHGDH-223ENST00000641597 NECAB2Q7Z6G3 386 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 ALDH16A1Q8IZ83 802 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 HS6ST3Q8IZP7 471 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 PARP8Q8N3A8 854 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 BEND7Q8N7W2 519 aaPredicted RBP16.43■□□□□ 0.22
PHGDH-223ENST00000641597 DCAF4L2Q8NA75 395 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 OR8J3Q8NGG0 315 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 ZBTB18Q99592 522 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 TMEM175Q9BSA9 504 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 DGCR6LQ9BY27 220 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 OSBPL6Q9BZF3 934 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 ATG10Q9H0Y0 220 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 CLMPQ9H6B4 373 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 SERHLQ9NQF3 203 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 FAM118AQ9NWS6 357 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 ERVK-11Q9UQG0 969 aa16.43■□□□□ 0.22
PHGDH-223ENST00000641597 DNAH14Q0VDD8 3507 aa16.42■□□□□ 0.22
PHGDH-223ENST00000641597 PTGES3LE9PB15 166 aa16.42■□□□□ 0.22
PHGDH-223ENST00000641597 HS6ST1O60243 411 aa16.42■□□□□ 0.22
PHGDH-223ENST00000641597 XYLBO75191 536 aa16.42■□□□□ 0.22
PHGDH-223ENST00000641597 PARNO95453 639 aaKnown RBP16.42■□□□□ 0.22
PHGDH-223ENST00000641597 NPPAP01160 153 aa16.42■□□□□ 0.22
PHGDH-223ENST00000641597 DCKP27707 260 aa16.42■□□□□ 0.22
PHGDH-223ENST00000641597 AP1S1P61966 158 aa16.42■□□□□ 0.22
PHGDH-223ENST00000641597 LDLRAP1Q5SW96 308 aa16.42■□□□□ 0.22
PHGDH-223ENST00000641597 CMTM8Q8IZV2 173 aa16.42■□□□□ 0.22
PHGDH-223ENST00000641597 APIPQ96GX9 242 aa16.42■□□□□ 0.22
PHGDH-223ENST00000641597 MRPL9Q9BYD2 267 aaKnown RBP16.42■□□□□ 0.22
PHGDH-223ENST00000641597 KAT8Q9H7Z6 458 aaKnown RBP16.42■□□□□ 0.22
PHGDH-223ENST00000641597 TMPRSS11EQ9UL52 423 aa16.42■□□□□ 0.22
PHGDH-223ENST00000641597 J3QRK9 145 aa16.42■□□□□ 0.22
PHGDH-223ENST00000641597 TULP3O75386 442 aa16.42■□□□□ 0.22
PHGDH-223ENST00000641597 CKMP06732 381 aa16.42■□□□□ 0.22
PHGDH-223ENST00000641597 CYP4B1P13584 511 aa16.42■□□□□ 0.22
PHGDH-223ENST00000641597 BOP1Q14137 746 aaKnown RBP16.42■□□□□ 0.22
PHGDH-223ENST00000641597 RUNDC3AQ59EK9 446 aa16.42■□□□□ 0.22
PHGDH-223ENST00000641597 ADNP2Q6IQ32 1131 aa16.42■□□□□ 0.22
PHGDH-223ENST00000641597 ANKRD26P1Q6NSI1 321 aa16.42■□□□□ 0.22
PHGDH-223ENST00000641597 NEK5Q6P3R8 708 aa16.42■□□□□ 0.22
PHGDH-223ENST00000641597 GAREM2Q75VX8 874 aa16.42■□□□□ 0.22
PHGDH-223ENST00000641597 PNPT1Q8TCS8 783 aaKnown RBP16.42■□□□□ 0.22
PHGDH-223ENST00000641597 OVCA2Q8WZ82 227 aa16.42■□□□□ 0.22
PHGDH-223ENST00000641597 FBXL8Q96CD0 374 aa16.42■□□□□ 0.22
PHGDH-223ENST00000641597 THAP11Q96EK4 314 aa16.42■□□□□ 0.22
PHGDH-223ENST00000641597 BBS2Q9BXC9 721 aa16.42■□□□□ 0.22
PHGDH-223ENST00000641597 PAIP1Q9H074 479 aaKnown RBP16.42■□□□□ 0.22
PHGDH-223ENST00000641597 IL21Q9HBE4 155 aa16.42■□□□□ 0.22
PHGDH-223ENST00000641597 PAK1IP1Q9NWT1 392 aaPredicted RBP16.42■□□□□ 0.22
PHGDH-223ENST00000641597 CFAP97Q9P2B7 532 aa16.42■□□□□ 0.22
PHGDH-223ENST00000641597 BACE2Q9Y5Z0 518 aa16.42■□□□□ 0.22
PHGDH-223ENST00000641597 TRBV5-4A0A0C4DH59 114 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 GMNNO75496 209 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 C7P10643 843 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 RPS3P23396 243 aaKnown RBP eCLIP16.41■□□□□ 0.223e-8■■■■■ 28.4
PHGDH-223ENST00000641597 CRHBPP24387 322 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 CD47Q08722 323 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 DPY19L1Q2PZI1 675 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 CACHD1Q5VU97 1274 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 CES5AQ6NT32 575 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 TRIM46Q7Z4K8 759 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 RNF168Q8IYW5 571 aaPredicted RBP16.41■□□□□ 0.22
PHGDH-223ENST00000641597 SELENOMQ8WWX9 145 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 RHNO1Q9BSD3 238 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 PARVBQ9HBI1 364 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 C1orf109Q9NX04 203 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 STOML2Q9UJZ1 356 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 IFRD1O00458 451 aaPredicted RBP16.41■□□□□ 0.22
PHGDH-223ENST00000641597 XPNPEP2O43895 674 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 CREG1O75629 220 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 SPAM1P38567 509 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 PPP2R2BQ00005 443 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 IL1RL1Q01638 556 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 PTSQ03393 145 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 VAC14Q08AM6 782 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 BFSP2Q13515 415 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 Q6ZNB5 142 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 CDC26Q8NHZ8 85 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 CNIH3Q8TBE1 160 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 TBC1D15Q8TC07 691 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 APOLD1Q96LR9 279 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 C2orf49Q9BVC5 232 aaPredicted RBP16.41■□□□□ 0.22
PHGDH-223ENST00000641597 OSBPL10Q9BXB5 764 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 GORASP2Q9H8Y8 452 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 HMX1Q9NP08 348 aaPredicted RBP16.41■□□□□ 0.22
PHGDH-223ENST00000641597 SLC22A14Q9Y267 594 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 USP34Q70CQ2 3546 aa16.41■□□□□ 0.22
PHGDH-223ENST00000641597 TRBV5-3A0A0A0MS03 114 aa16.4■□□□□ 0.22
PHGDH-223ENST00000641597 H0YAE9 185 aa16.4■□□□□ 0.22
PHGDH-223ENST00000641597 GFRA2O00451 464 aa16.4■□□□□ 0.22
PHGDH-223ENST00000641597 E2F6O75461 281 aa16.4■□□□□ 0.22
PHGDH-223ENST00000641597 GABRR2P28476 465 aa16.4■□□□□ 0.22
PHGDH-223ENST00000641597 PSMD7P51665 324 aa16.4■□□□□ 0.22
PHGDH-223ENST00000641597 NAA20P61599 178 aa16.4■□□□□ 0.22
PHGDH-223ENST00000641597 OR4F3Q6IEY1 312 aa16.4■□□□□ 0.22
PHGDH-223ENST00000641597 RETSATQ6NUM9 610 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms