RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 OTOAQ7RTW8 1153 aa24.35■■□□□ 1.49
VEGFA-232ENST00000640653 RUFY1Q96T51 708 aa24.35■■□□□ 1.49
VEGFA-232ENST00000640653 SAMD15Q9P1V8 674 aa24.35■■□□□ 1.49
VEGFA-232ENST00000640653 MAN2B2Q9Y2E5 1009 aa24.35■■□□□ 1.49
VEGFA-232ENST00000640653 RAB40ALP0C0E4 278 aa24.34■■□□□ 1.49
VEGFA-232ENST00000640653 RORAP35398 523 aa24.34■■□□□ 1.49
VEGFA-232ENST00000640653 COILP38432 576 aaPredicted RBP24.34■■□□□ 1.49
VEGFA-232ENST00000640653 EIF3BP55884 814 aaKnown RBP24.34■■□□□ 1.49
VEGFA-232ENST00000640653 RPS18P62269 152 aaKnown RBP24.34■■□□□ 1.49
VEGFA-232ENST00000640653 CYP1B1Q16678 543 aa24.34■■□□□ 1.49
VEGFA-232ENST00000640653 CASC4Q6P4E1 433 aa24.34■■□□□ 1.49
VEGFA-232ENST00000640653 CCDC137Q6PK04 289 aaKnown RBP24.34■■□□□ 1.49
VEGFA-232ENST00000640653 FLVCR1-AS1Q8TAF5 88 aa24.34■■□□□ 1.49
VEGFA-232ENST00000640653 THAP4Q8WY91 577 aa24.34■■□□□ 1.49
VEGFA-232ENST00000640653 SLC22A18Q96BI1 424 aa24.34■■□□□ 1.49
VEGFA-232ENST00000640653 ABHD17AQ96GS6 310 aa24.34■■□□□ 1.49
VEGFA-232ENST00000640653 TCF12Q99081 682 aa24.34■■□□□ 1.49
VEGFA-232ENST00000640653 PCMTD2Q9NV79 361 aa24.34■■□□□ 1.49
VEGFA-232ENST00000640653 MRFAP1Q9Y605 127 aa24.34■■□□□ 1.49
VEGFA-232ENST00000640653 GCN1Q92616 2671 aaKnown RBP24.34■■□□□ 1.49
VEGFA-232ENST00000640653 H3BMM5 538 aa24.33■■□□□ 1.49
VEGFA-232ENST00000640653 AVILO75366 819 aa24.33■■□□□ 1.49
VEGFA-232ENST00000640653 MLNP12872 115 aa24.33■■□□□ 1.49
VEGFA-232ENST00000640653 TYSND1Q2T9J0 566 aa24.33■■□□□ 1.49
VEGFA-232ENST00000640653 ANKRD22Q5VYY1 191 aa24.33■■□□□ 1.49
VEGFA-232ENST00000640653 TMEM135Q86UB9 458 aa24.33■■□□□ 1.49
VEGFA-232ENST00000640653 PTRH1Q86Y79 214 aaKnown RBP24.33■■□□□ 1.49
VEGFA-232ENST00000640653 REXO1L1PQ8IX06 675 aa24.33■■□□□ 1.49
VEGFA-232ENST00000640653 SYTL1Q8IYJ3 562 aa24.33■■□□□ 1.49
VEGFA-232ENST00000640653 SLC35F6Q8N357 371 aa24.33■■□□□ 1.49
VEGFA-232ENST00000640653 SKA2Q8WVK7 121 aaPredicted RBP24.33■■□□□ 1.49
VEGFA-232ENST00000640653 DPH2Q9BQC3 489 aaPredicted RBP24.33■■□□□ 1.49
VEGFA-232ENST00000640653 NLNQ9BYT8 704 aa24.33■■□□□ 1.49
VEGFA-232ENST00000640653 XAB2Q9HCS7 855 aaKnown RBP24.33■■□□□ 1.49
VEGFA-232ENST00000640653 FAM60AQ9NP50 221 aa24.33■■□□□ 1.49
VEGFA-232ENST00000640653 AP1M2Q9Y6Q5 423 aa24.33■■□□□ 1.49
VEGFA-232ENST00000640653 GOLGA6L10A0A0M3HER8 536 aa24.32■■□□□ 1.48
VEGFA-232ENST00000640653 GOLGA8KD6RF30 607 aa24.32■■□□□ 1.48
VEGFA-232ENST00000640653 MKRN2OSH3BPM6 223 aa24.32■■□□□ 1.48
VEGFA-232ENST00000640653 GOLGA8TH3BQL2 631 aa24.32■■□□□ 1.48
VEGFA-232ENST00000640653 ZNF749O43361 778 aa24.32■■□□□ 1.48
VEGFA-232ENST00000640653 RFPL1O75677 317 aa24.32■■□□□ 1.48
VEGFA-232ENST00000640653 OGNP20774 298 aaKnown RBP24.32■■□□□ 1.48
VEGFA-232ENST00000640653 PEBP1P30086 187 aaKnown RBP24.32■■□□□ 1.48
VEGFA-232ENST00000640653 PMS2P54278 862 aa24.32■■□□□ 1.48
VEGFA-232ENST00000640653 ZIC1Q15915 447 aa24.32■■□□□ 1.48
VEGFA-232ENST00000640653 LACTB2Q53H82 288 aaPredicted RBP24.32■■□□□ 1.48
VEGFA-232ENST00000640653 CTSL3PQ5NE16 218 aa24.32■■□□□ 1.48
VEGFA-232ENST00000640653 CAND1Q86VP6 1230 aaKnown RBP24.32■■□□□ 1.48
VEGFA-232ENST00000640653 MCUQ8NE86 351 aa24.32■■□□□ 1.48
VEGFA-232ENST00000640653 ACTRT1Q8TDG2 376 aa24.32■■□□□ 1.48
VEGFA-232ENST00000640653 GRK7Q8WTQ7 553 aa24.32■■□□□ 1.48
VEGFA-232ENST00000640653 LPGAT1Q92604 370 aa24.32■■□□□ 1.48
VEGFA-232ENST00000640653 FOPNLQ96NB1 174 aa24.32■■□□□ 1.48
VEGFA-232ENST00000640653 OSBPL9Q96SU4 736 aa24.32■■□□□ 1.48
VEGFA-232ENST00000640653 RAB11FIP5Q9BXF6 653 aa24.32■■□□□ 1.48
VEGFA-232ENST00000640653 ZNF71Q9NQZ8 489 aaPredicted RBP24.32■■□□□ 1.48
VEGFA-232ENST00000640653 SLC39A10Q9ULF5 831 aa24.32■■□□□ 1.48
VEGFA-232ENST00000640653 SNX7Q9UNH6 387 aa24.32■■□□□ 1.48
VEGFA-232ENST00000640653 VPS9D1Q9Y2B5 631 aa24.32■■□□□ 1.48
VEGFA-232ENST00000640653 BOD1L1Q8NFC6 3051 aa24.32■■□□□ 1.48
VEGFA-232ENST00000640653 MAGEB16A2A368 324 aa24.31■■□□□ 1.48
VEGFA-232ENST00000640653 RASGRF2O14827 1237 aa24.31■■□□□ 1.48
VEGFA-232ENST00000640653 KIF5CO60282 957 aa24.31■■□□□ 1.48
VEGFA-232ENST00000640653 OR2B3O76000 313 aa24.31■■□□□ 1.48
VEGFA-232ENST00000640653 TMEM63AO94886 807 aa24.31■■□□□ 1.48
VEGFA-232ENST00000640653 ESR1P03372 595 aa24.31■■□□□ 1.48
VEGFA-232ENST00000640653 AGXTP21549 392 aa24.31■■□□□ 1.48
VEGFA-232ENST00000640653 CD9P21926 228 aa24.31■■□□□ 1.48
VEGFA-232ENST00000640653 FMO4P31512 558 aa24.31■■□□□ 1.48
VEGFA-232ENST00000640653 ADARP55265 1226 aaKnown RBP24.31■■□□□ 1.48
VEGFA-232ENST00000640653 DEFB110Q30KQ9 67 aa24.31■■□□□ 1.48
VEGFA-232ENST00000640653 LCN10Q6JVE6 187 aa24.31■■□□□ 1.48
VEGFA-232ENST00000640653 APLFQ8IW19 511 aaPredicted RBP24.31■■□□□ 1.48
VEGFA-232ENST00000640653 RAB42Q8N4Z0 105 aa24.31■■□□□ 1.48
VEGFA-232ENST00000640653 ENDOVQ8N8Q3 282 aaKnown RBP24.31■■□□□ 1.48
VEGFA-232ENST00000640653 OR2L8Q8NGY9 312 aa24.31■■□□□ 1.48
VEGFA-232ENST00000640653 BIRC8Q96P09 236 aa24.31■■□□□ 1.48
VEGFA-232ENST00000640653 MENTQ9BUN1 341 aa24.31■■□□□ 1.48
VEGFA-232ENST00000640653 FAM237BA0A1B0GVD1 139 aa24.3■■□□□ 1.48
VEGFA-232ENST00000640653 SDR42E2A6NKP2 422 aa24.3■■□□□ 1.48
VEGFA-232ENST00000640653 C9J4A7 227 aa24.3■■□□□ 1.48
VEGFA-232ENST00000640653 PHF2O75151 1096 aa24.3■■□□□ 1.48
VEGFA-232ENST00000640653 S1PR4O95977 384 aa24.3■■□□□ 1.48
VEGFA-232ENST00000640653 IL10RAQ13651 578 aa24.3■■□□□ 1.48
VEGFA-232ENST00000640653 GRB7Q14451 532 aa24.3■■□□□ 1.48
VEGFA-232ENST00000640653 LINC01555Q8NAE3 123 aa24.3■■□□□ 1.48
VEGFA-232ENST00000640653 COG1Q8WTW3 980 aa24.3■■□□□ 1.48
VEGFA-232ENST00000640653 RAD51AP1Q96B01 352 aa24.3■■□□□ 1.48
VEGFA-232ENST00000640653 INTS7Q9NVH2 962 aaKnown RBP24.3■■□□□ 1.48
VEGFA-232ENST00000640653 CIDEBQ9UHD4 219 aa24.3■■□□□ 1.48
VEGFA-232ENST00000640653 NEU2Q9Y3R4 380 aa24.3■■□□□ 1.48
VEGFA-232ENST00000640653 CES2O00748 559 aa24.29■■□□□ 1.48
VEGFA-232ENST00000640653 C1orf105O95561 183 aa24.29■■□□□ 1.48
VEGFA-232ENST00000640653 CCNFP41002 786 aa24.29■■□□□ 1.48
VEGFA-232ENST00000640653 GABRA4P48169 554 aa24.29■■□□□ 1.48
VEGFA-232ENST00000640653 FNTAP49354 379 aa24.29■■□□□ 1.48
VEGFA-232ENST00000640653 DHX34Q14147 1143 aaKnown RBP24.29■■□□□ 1.48
VEGFA-232ENST00000640653 PTCHD3Q3KNS1 767 aa24.29■■□□□ 1.48
VEGFA-232ENST00000640653 NEPROQ6NW34 567 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms