RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 BSNDQ8WZ55 320 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 ACDQ96AP0 544 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 SLC9A7Q96T83 725 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 POMKQ9H5K3 350 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 ASB7Q9H672 318 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 CDHR5Q9HBB8 845 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 MID1IP1Q9NPA3 183 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 CALML5Q9NZT1 146 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 PCDH10Q9P2E7 1040 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 AP1M2Q9Y6Q5 423 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 CAMTA1Q9Y6Y1 1673 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 A0A0A0MRY4 1105 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 GRXCR2A6NFK2 248 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 RRN3P2A6NIE6 340 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 B4GALT5O43286 388 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 BUD23O43709 281 aaKnown RBP8.12□□□□□ -1.11
NECAP1-227ENST00000640648 CAPN15O75808 1086 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 C9P02748 559 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 NDST2P52849 883 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 CDH11P55287 796 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 B2MP61769 119 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 RGS1Q08116 209 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 CHAF1BQ13112 559 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 EIF4HQ15056 248 aaKnown RBP8.12□□□□□ -1.11
NECAP1-227ENST00000640648 SPRED3Q2MJR0 410 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 USP39Q53GS9 565 aaKnown RBP8.12□□□□□ -1.11
NECAP1-227ENST00000640648 FGD3Q5JSP0 725 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 EEF1DP3Q658K8 133 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 ADNP2Q6IQ32 1131 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 PET117Q6UWS5 81 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 LGI2Q8N0V4 545 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 LINC00471Q8N535 108 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 CLRN3Q8NCR9 226 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 SETD7Q8WTS6 366 aaKnown RBP8.12□□□□□ -1.11
NECAP1-227ENST00000640648 SPATA13Q96N96 652 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 CDADC1Q9BWV3 514 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 PDGFDQ9GZP0 370 aaPredicted RBP8.12□□□□□ -1.11
NECAP1-227ENST00000640648 PRDM12Q9H4Q4 367 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 RERGLQ9H628 205 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 ZBTB26Q9HCK0 441 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 RAD18Q9NS91 495 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 SRRDQ9UH36 339 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 POU2F3Q9UKI9 436 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 DLGAP4Q9Y2H0 992 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 A0A0J9YYE9 177 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 F8W036 122 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 TOR1AO14656 332 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 PHYHO14832 338 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 PMM2O15305 246 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 SLC22A3O75751 556 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 TFEBP19484 476 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 EFEMP1Q12805 493 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 NR6A1Q15406 480 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 DCAF12L1Q5VU92 463 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 FAM205BPQ63HN1 556 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 FAM199XQ6PEV8 388 aaPredicted RBP8.12□□□□□ -1.11
NECAP1-227ENST00000640648 LRRN1Q6UXK5 716 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 R3HCC1LQ7Z5L2 792 aaKnown RBP8.12□□□□□ -1.11
NECAP1-227ENST00000640648 GJD3Q8N144 294 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 OR52K2Q8NGK3 314 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 MOSPD2Q8NHP6 518 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 CEP76Q8TAP6 659 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 COPS5Q92905 334 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 CLP1Q92989 425 aaKnown RBP8.12□□□□□ -1.11
NECAP1-227ENST00000640648 ARL11Q969Q4 196 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 MFSD14AQ96MC6 490 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 ATP13A3Q9H7F0 1226 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.12□□□□□ -1.11
NECAP1-227ENST00000640648 PTGFRNQ9P2B2 879 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 CDC14AQ9UNH5 594 aa8.12□□□□□ -1.11
NECAP1-227ENST00000640648 FARSAQ9Y285 508 aaKnown RBP8.12□□□□□ -1.11
NECAP1-227ENST00000640648 KAT6AQ92794 2004 aa8.11□□□□□ -1.11
NECAP1-227ENST00000640648 SLC28A1O00337 649 aa8.11□□□□□ -1.11
NECAP1-227ENST00000640648 HSPA12AO43301 675 aa8.11□□□□□ -1.11
NECAP1-227ENST00000640648 ATP6AP2O75787 350 aa8.11□□□□□ -1.11
NECAP1-227ENST00000640648 PAK4O96013 591 aaPredicted RBP8.11□□□□□ -1.11
NECAP1-227ENST00000640648 RPS2P15880 293 aaKnown RBP8.11□□□□□ -1.11
NECAP1-227ENST00000640648 GOT1P17174 413 aa8.11□□□□□ -1.11
NECAP1-227ENST00000640648 CHRNB2P17787 502 aa8.11□□□□□ -1.11
NECAP1-227ENST00000640648 FUT4P22083 530 aa8.11□□□□□ -1.11
NECAP1-227ENST00000640648 ARSFP54793 590 aa8.11□□□□□ -1.11
NECAP1-227ENST00000640648 RNF4P78317 190 aa8.11□□□□□ -1.11
NECAP1-227ENST00000640648 PLD1Q13393 1074 aa8.11□□□□□ -1.11
NECAP1-227ENST00000640648 EXOC3L2Q2M3D2 409 aa8.11□□□□□ -1.11
NECAP1-227ENST00000640648 VPS26BQ4G0F5 336 aa8.11□□□□□ -1.11
NECAP1-227ENST00000640648 C1orf94Q6P1W5 598 aa8.11□□□□□ -1.11
NECAP1-227ENST00000640648 SLC51AQ86UW1 340 aa8.11□□□□□ -1.11
NECAP1-227ENST00000640648 SPPL2CQ8IUH8 684 aa8.11□□□□□ -1.11
NECAP1-227ENST00000640648 CPT1BQ92523 772 aa8.11□□□□□ -1.11
NECAP1-227ENST00000640648 DUS3LQ96G46 650 aaKnown RBP8.11□□□□□ -1.11
NECAP1-227ENST00000640648 CCDC120Q96HB5 630 aa8.11□□□□□ -1.11
NECAP1-227ENST00000640648 RANBP9Q96S59 729 aa8.11□□□□□ -1.11
NECAP1-227ENST00000640648 FAM124BQ9H5Z6 455 aaPredicted RBP8.11□□□□□ -1.11
NECAP1-227ENST00000640648 TREM1Q9NP99 234 aa8.11□□□□□ -1.11
NECAP1-227ENST00000640648 SMOXQ9NWM0 555 aa8.11□□□□□ -1.11
NECAP1-227ENST00000640648 OAZ3Q9UMX2 235 aa8.11□□□□□ -1.11
NECAP1-227ENST00000640648 DYRK1BQ9Y463 629 aa8.11□□□□□ -1.11
NECAP1-227ENST00000640648 PCDHB5Q9Y5E4 795 aa8.11□□□□□ -1.11
NECAP1-227ENST00000640648 NUBP2Q9Y5Y2 271 aa8.11□□□□□ -1.11
NECAP1-227ENST00000640648 PDCD5O14737 125 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms