RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 PDPRQ8NCN5 879 aa14.27□□□□□ -0.12
SCARB2-221ENST00000640341 RBM4BQ9BQ04 359 aaKnown RBP14.27□□□□□ -0.12
SCARB2-221ENST00000640341 DPH2Q9BQC3 489 aaPredicted RBP14.27□□□□□ -0.12
SCARB2-221ENST00000640341 RBM4Q9BWF3 364 aaKnown RBP14.27□□□□□ -0.12
SCARB2-221ENST00000640341 OSBPL10Q9BXB5 764 aa14.27□□□□□ -0.12
SCARB2-221ENST00000640341 BBS2Q9BXC9 721 aa14.27□□□□□ -0.12
SCARB2-221ENST00000640341 AMBNQ9NP70 447 aa14.27□□□□□ -0.12
SCARB2-221ENST00000640341 CDH7Q9ULB5 785 aa14.27□□□□□ -0.12
SCARB2-221ENST00000640341 NLRC5Q86WI3 1866 aa14.27□□□□□ -0.12
SCARB2-221ENST00000640341 M0R3G1 203 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 BCKDKO14874 412 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 ANGPTL1O95841 491 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 F11P03951 625 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 HTR1AP08908 422 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 JAK1P23458 1154 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 DGKAP23743 735 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 FCGRTP55899 365 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 NFATC2Q13469 925 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 MOGQ16653 247 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 OR4F3Q6IEY1 312 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 RFLNAQ6ZTI6 216 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 VTCN1Q7Z7D3 282 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 ZBTB2Q8N680 514 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 MCOLN3Q8TDD5 553 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 UBE2FQ969M7 185 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 TPD52L3Q96J77 140 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 C8orf4Q9NR00 106 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 PAK1IP1Q9NWT1 392 aaPredicted RBP14.27□□□□□ -0.13
SCARB2-221ENST00000640341 GPRC5BQ9NZH0 403 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 IL37Q9NZH6 218 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 SH3GLB1Q9Y371 365 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 PTPRDP23468 1912 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 PABPN1LA6NDY0 278 aaKnown RBP14.27□□□□□ -0.13
SCARB2-221ENST00000640341 SLC1A7O00341 560 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 STK16O75716 305 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 PRSS23O95084 383 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 HMGCLP35914 325 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 RPIAP49247 311 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 CLCN4P51793 760 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 PHC1P78364 1004 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 BTG3Q14201 252 aaPredicted RBP14.27□□□□□ -0.13
SCARB2-221ENST00000640341 PCBP2Q15366 365 aaKnown RBP eCLIP14.27□□□□□ -0.13
SCARB2-221ENST00000640341 SKIV2LQ15477 1246 aaKnown RBP14.27□□□□□ -0.13
SCARB2-221ENST00000640341 NCEH1Q6PIU2 408 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 ZNF621Q6ZSS3 439 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 IGFN1Q86VF2 1251 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 ZDHHC21Q8IVQ6 265 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 APCDD1Q8J025 514 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 RBFAQ8N0V3 343 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 OR8J3Q8NGG0 315 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 BCL7CQ8WUZ0 217 aaPredicted RBP14.27□□□□□ -0.13
SCARB2-221ENST00000640341 CD244Q9BZW8 370 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 ERVK-18Q9QC07 812 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 ZNF639Q9UID6 485 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 GNPTGQ9UJJ9 305 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 RIMKLBQ9ULI2 386 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 ZNF510Q9Y2H8 683 aa14.27□□□□□ -0.13
SCARB2-221ENST00000640341 FUOMA2VDF0 154 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 SEC14L2O76054 403 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 PDYNP01213 254 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 NTRK1P04629 796 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 IGFBP5P24593 272 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 BCL2L1Q07817 233 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 SLC14A1Q13336 389 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 IRF5Q13568 498 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 DPY19L1Q2PZI1 675 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 PAGE2BQ5JRK9 111 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 TMEM236Q5W0B7 351 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 ALG1LQ6GMV1 187 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 UTS2BQ765I0 119 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 TERB1Q8NA31 727 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 ABHD11Q8NFV4 315 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 P2RY12Q9H244 342 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 VNN3Q9NY84 501 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 KIF17Q9P2E2 1029 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 ARNTLO00327 626 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 MANBAO00462 879 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 RFXANKO14593 260 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 ZSCAN9O15535 394 aaPredicted RBP14.26□□□□□ -0.13
SCARB2-221ENST00000640341 CPNE6O95741 557 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 FUT4P22083 530 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 TGFBR1P36897 503 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 TMBIM6P55061 237 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 RPS14P62263 151 aaKnown RBP14.26□□□□□ -0.13
SCARB2-221ENST00000640341 CARTPTQ16568 116 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 TRIM71Q2Q1W2 868 aaKnown RBP14.26□□□□□ -0.13
SCARB2-221ENST00000640341 RNF180Q86T96 592 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 ATG16L2Q8NAA4 619 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 POLE4Q9NR33 117 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 C1orf109Q9NX04 203 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 FBXO10Q9UK96 956 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 ABCG2Q9UNQ0 655 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 NEUROG3Q9Y4Z2 214 aa14.26□□□□□ -0.13
SCARB2-221ENST00000640341 GLYATL1P3A0A0U1RQE8 302 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 IFRD1O00458 451 aaPredicted RBP14.25□□□□□ -0.13
SCARB2-221ENST00000640341 AREL1O15033 823 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 WDR47O94967 919 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 NPPAP01160 153 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 EPHA2P29317 976 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 IDUAP35475 653 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms