RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 GSAPA4D1B5 854 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 FAM221BA6H8Z2 402 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 A8MU76 341 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 FOXO6A8MYZ6 492 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 MYO1CO00159 1063 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 SLC16A5O15375 505 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 CTIFO43310 598 aaKnown RBP12.79□□□□□ -0.36
GTF3A-209ENST00000640289 KRT37O76014 449 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 C9P02748 559 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 C8GP07360 202 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 CHRM5P08912 532 aaPredicted RBP12.79□□□□□ -0.36
GTF3A-209ENST00000640289 SNRPAP09012 282 aaKnown RBP12.79□□□□□ -0.36
GTF3A-209ENST00000640289 NUDT17P0C025 328 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 JUPP14923 745 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 CD1DP15813 335 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 CYP2A7P20853 494 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 CNTFP26441 200 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 MAP4P27816 1152 aaKnown RBP12.79□□□□□ -0.36
GTF3A-209ENST00000640289 CRABP2P29373 138 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 PEBP1P30086 187 aaKnown RBP12.79□□□□□ -0.36
GTF3A-209ENST00000640289 SHMT2P34897 504 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 MAGEA12P43365 314 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 RAB28P51157 221 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 KPNA2P52292 529 aaKnown RBP12.79□□□□□ -0.36
GTF3A-209ENST00000640289 ZFP36L1Q07352 338 aaKnown RBP12.79□□□□□ -0.36
GTF3A-209ENST00000640289 TARDBPQ13148 414 aaKnown RBP eCLIP12.79□□□□□ -0.36
GTF3A-209ENST00000640289 SP140Q13342 867 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 FASTKQ14296 549 aaKnown RBP12.79□□□□□ -0.36
GTF3A-209ENST00000640289 TSNQ15631 228 aaKnown RBP12.79□□□□□ -0.36
GTF3A-209ENST00000640289 ISXQ2M1V0 245 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 KLHL35Q6PF15 583 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 FAM92BQ6ZTR7 304 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 DCBLD1Q8N8Z6 715 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 FBXO15Q8NCQ5 510 aaPredicted RBP12.79□□□□□ -0.36
GTF3A-209ENST00000640289 RCBTB1Q8NDN9 531 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 OR4D9Q8NGE8 314 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 OR9A1PQ8NGU1 263 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 KCTD4Q8WVF5 259 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 ISL2Q96A47 359 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 CCDC74BQ96LY2 380 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 PPM1MQ96MI6 270 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 DEPDC7Q96QD5 511 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 SLC12A9Q9BXP2 914 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 DERL2Q9GZP9 239 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 VPS11Q9H270 941 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 IGSF5Q9NSI5 407 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 SPHK1Q9NYA1 384 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 WASF3Q9UPY6 502 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 ACOT9Q9Y305 439 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 ENTPD2Q9Y5L3 495 aa12.79□□□□□ -0.36
GTF3A-209ENST00000640289 MN1Q10571 1320 aaPredicted RBP12.79□□□□□ -0.36
GTF3A-209ENST00000640289 COL27A1Q8IZC6 1860 aaPredicted RBP12.78□□□□□ -0.36
GTF3A-209ENST00000640289 A0A087X1B8 175 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 IQANK1A0A1B0GTG1 560 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 PIPSLA2A3N6 862 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 KDM1AO60341 852 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 ADRB1P08588 477 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 THRAP10827 490 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 INHBCP55103 352 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 PRKAA1Q13131 559 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 CLPPQ16740 277 aaPredicted RBP12.78□□□□□ -0.36
GTF3A-209ENST00000640289 PPP1R3AQ16821 1122 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 PHF19Q5T6S3 580 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 LGSNQ5TDP6 509 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 ARMC6Q6NXE6 501 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 FBXO38Q6PIJ6 1188 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 SBSNQ6UWP8 590 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 TBC1D1Q86TI0 1168 aaPredicted RBP12.78□□□□□ -0.36
GTF3A-209ENST00000640289 PLXDC1Q8IUK5 500 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 CENPLQ8N0S6 344 aaPredicted RBP12.78□□□□□ -0.36
GTF3A-209ENST00000640289 CYP4X1Q8N118 509 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 GALNT15Q8N3T1 639 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 PPFIBP2Q8ND30 876 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 MYRIPQ8NFW9 859 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 OR2L8Q8NGY9 312 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 MCOLN3Q8TDD5 553 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 MZB1Q8WU39 189 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 PTERQ96BW5 349 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 NXNL1Q96CM4 212 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 MAP3K3Q99759 626 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 DPYSL5Q9BPU6 564 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 SCNM1Q9BWG6 230 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 RAB33BQ9H082 229 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 PARVBQ9HBI1 364 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 UTP6Q9NYH9 597 aaKnown RBP12.78□□□□□ -0.36
GTF3A-209ENST00000640289 EURLQ9NYK6 297 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 ACTR10Q9NZ32 417 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 OR6C2Q9NZP2 312 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 SPATA7Q9P0W8 599 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.78□□□□□ -0.36
GTF3A-209ENST00000640289 EPHA6Q9UF33 1036 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 TLK1Q9UKI8 766 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 PLAAQ9Y263 795 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 ASXL3Q9C0F0 2248 aa12.78□□□□□ -0.36
GTF3A-209ENST00000640289 MED19A0JLT2 244 aaPredicted RBP12.77□□□□□ -0.37
GTF3A-209ENST00000640289 TLDC2A0PJX2 215 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 PMS2P1A4D2B8 440 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 CCDC151A5D8V7 595 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 ISM1B1AKI9 464 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 ERLIN1O75477 346 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms