RNA–Protein interactions for RNA: ENST00000640187.1

SPIN3-237, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-237ENST00000640187 TRIM38O00635 465 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 LSM1O15116 133 aaKnown RBP12.71□□□□□ -0.37
SPIN3-237ENST00000640187 TSPAN6O43657 245 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 DCDC1P59894 354 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 ERVK-8P63133 956 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 ABRQ12979 859 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 NR6A1Q15406 480 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 ZNF284Q2VY69 593 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 ATP6AP1LQ52LC2 224 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 PAGE3Q5JUK9 113 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 PPP2R2DQ66LE6 453 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 SPATA19Q7Z5L4 167 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 CACUL1Q86Y37 369 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 PROKR1Q8TCW9 393 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 LRIG1Q96JA1 1093 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 SLC12A9Q9BXP2 914 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 ATG10Q9H0Y0 220 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 PARVBQ9HBI1 364 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 MRGBPQ9NV56 204 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 KLQ9UEF7 1012 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 NDUFAF1Q9Y375 327 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 SH3PXD2BA1X283 911 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 BOLA2-SMG1P6H3BVE0 249 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 NUAK1O60285 661 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 MMP20O60882 483 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 RSL1D1O76021 490 aaKnown RBP12.71□□□□□ -0.37
SPIN3-237ENST00000640187 MATN4O95460 622 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 G6PDP11413 515 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 EPB42P16452 691 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 PREPP48147 710 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 TMEM115Q12893 351 aaPredicted RBP12.71□□□□□ -0.37
SPIN3-237ENST00000640187 CPSF6Q16630 551 aaKnown RBP eCLIP12.71□□□□□ -0.37
SPIN3-237ENST00000640187 AP5B1Q2VPB7 878 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 ERAP2Q6P179 960 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 ZFP1Q6P2D0 407 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 EFL1Q7Z2Z2 1120 aaKnown RBP12.71□□□□□ -0.37
SPIN3-237ENST00000640187 MMAAQ8IVH4 418 aaKnown RBP12.71□□□□□ -0.37
SPIN3-237ENST00000640187 LILRA2Q8N149 483 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 TRIML2Q8N7C3 387 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 DDHD1Q8NEL9 900 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 GLYATL1Q969I3 302 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 CHFRQ96EP1 664 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 HAUS8Q9BT25 410 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 ZSCAN5AQ9BUG6 496 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 RPP25Q9BUL9 199 aaKnown RBP12.71□□□□□ -0.37
SPIN3-237ENST00000640187 LIN28AQ9H9Z2 209 aaKnown RBP12.71□□□□□ -0.37
SPIN3-237ENST00000640187 SPAG4Q9NPE6 437 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 RIC8BQ9NVN3 520 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 TMEM181Q9P2C4 612 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 CD300AQ9UGN4 299 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 CCL27Q9Y4X3 112 aa12.71□□□□□ -0.37
SPIN3-237ENST00000640187 DNAH14Q0VDD8 3507 aa12.71□□□□□ -0.38
SPIN3-237ENST00000640187 PLXNA2O75051 1894 aa12.71□□□□□ -0.38
SPIN3-237ENST00000640187 FXYD1O00168 92 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 WNT9AO14904 365 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 ANGPT2O15123 496 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 SLC22A3O75751 556 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 BCAS2O75934 225 aaPredicted RBP12.7□□□□□ -0.38
SPIN3-237ENST00000640187 PBLDP30039 288 aaPredicted RBP12.7□□□□□ -0.38
SPIN3-237ENST00000640187 OPRD1P41143 372 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 IL12RB1P42701 662 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 WASP42768 502 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 VASPP50552 380 aaPredicted RBP12.7□□□□□ -0.38
SPIN3-237ENST00000640187 CDK9P50750 372 aaKnown RBP12.7□□□□□ -0.38
SPIN3-237ENST00000640187 TRIM25Q14258 630 aaKnown RBP12.7□□□□□ -0.38
SPIN3-237ENST00000640187 PTCHD3Q3KNS1 767 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 CCSMST1Q4G0I0 132 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 IL23RQ5VWK5 629 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 NEK5Q6P3R8 708 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 SYCE2Q6PIF2 218 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 CYP2R1Q6VVX0 501 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 GPR149Q86SP6 731 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 RAVER1Q8IY67 606 aaKnown RBP12.7□□□□□ -0.38
SPIN3-237ENST00000640187 TERB1Q8NA31 727 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 TSPAN14Q8NG11 270 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 CCT7Q99832 543 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 TMEM245Q9H330 911 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 ACTL8Q9H568 366 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 KIF26AQ9ULI4 1882 aaPredicted RBP12.7□□□□□ -0.38
SPIN3-237ENST00000640187 CNOT6Q9ULM6 557 aaKnown RBP12.7□□□□□ -0.38
SPIN3-237ENST00000640187 A0A1B0GTW7 788 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 CFAP99D6REC4 459 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 GFYI3L273 518 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 PRAMEF4O60810 478 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 RECQL5O94762 991 aaPredicted RBP12.7□□□□□ -0.38
SPIN3-237ENST00000640187 SOD1P00441 154 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 PRNPP04156 253 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 ZNF23P17027 643 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 PSMC3P17980 439 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 PDHA2P29803 388 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 SOX11P35716 441 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 CASP2P42575 452 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 STT3AP46977 705 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 NEK2P51955 445 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 PHEXP78562 749 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 PLEKHS1Q5SXH7 462 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 PRAMEF9Q5VWM5 478 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 TMEM220Q6QAJ8 160 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 Q6ZNX1 250 aa12.7□□□□□ -0.38
SPIN3-237ENST00000640187 LPCAT2Q7L5N7 544 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms