RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 FAM118BQ9BPY3 351 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 NAA11Q9BSU3 229 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-218ENST00000640036 PRTFDC1Q9NRG1 225 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 MS4A12Q9NXJ0 267 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 ANKMY1Q9P2S6 941 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 EIF3KQ9UBQ5 218 aaKnown RBP4.92□□□□□ -1.62
SCN1A-218ENST00000640036 PRODH2Q9UF12 536 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 G3V2T6 193 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 EIF3HO15372 352 aaKnown RBP eCLIP4.92□□□□□ -1.622e-7■■■■□ 19.6
SCN1A-218ENST00000640036 LRIG2O94898 1065 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 RPSAP08865 295 aaKnown RBP4.92□□□□□ -1.62
SCN1A-218ENST00000640036 PGAM1P18669 254 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 EIF2DP41214 584 aaKnown RBP4.92□□□□□ -1.62
SCN1A-218ENST00000640036 ARCN1P48444 511 aaKnown RBP4.92□□□□□ -1.62
SCN1A-218ENST00000640036 AP3S2P59780 193 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 SLC7A5Q01650 507 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 GBX1Q14549 363 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 ZNF234Q14588 700 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 DNAL1Q4LDG9 190 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 ANXA8L1Q5VT79 327 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 TSSK4Q6SA08 328 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 ABHD12BQ7Z5M8 362 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-218ENST00000640036 CNEP1R1Q8N9A8 125 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 DNAAF1Q8NEP3 725 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 ADAMTS18Q8TE60 1221 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 RTKNQ9BST9 563 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 OR8D2Q9GZM6 311 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 CALML5Q9NZT1 146 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 ABCA1O95477 2261 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 MDC1Q14676 2089 aaKnown RBP4.92□□□□□ -1.62
SCN1A-218ENST00000640036 RPLP0P05388 317 aaKnown RBP4.92□□□□□ -1.62
SCN1A-218ENST00000640036 OGNP20774 298 aaKnown RBP4.92□□□□□ -1.62
SCN1A-218ENST00000640036 SOX9P48436 509 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 ZXDAP98168 799 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 ABHD18Q0P651 414 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 TEX44Q53QW1 395 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 TMEM207Q6UWW9 146 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 GK5Q6ZS86 529 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 GAREM2Q75VX8 874 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 SLC13A5Q86YT5 568 aaPredicted RBP4.92□□□□□ -1.62
SCN1A-218ENST00000640036 GPR65Q8IYL9 337 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 SLC44A3Q8N4M1 653 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 AADATQ8N5Z0 425 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 PJA1Q8NG27 643 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 TMCO6Q96DC7 493 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 AMDHD1Q96NU7 426 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 SLC6A16Q9GZN6 736 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 MID1IP1Q9NPA3 183 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 TMEM216Q9P0N5 145 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 TMEM98Q9Y2Y6 226 aa4.92□□□□□ -1.62
SCN1A-218ENST00000640036 CCRL2O00421 344 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 LIN7AO14910 233 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 GSRP00390 522 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 PNMA6AP0CW24 399 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 PCSK2P16519 638 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 KDELR1P24390 212 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 PLA2G16P53816 162 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 VBP1P61758 197 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 KLC1Q07866 573 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 CBX3Q13185 183 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 FGD3Q5JSP0 725 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 DDI2Q5TDH0 399 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 RAET1LQ5VY80 246 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 ADGRG6Q86SQ4 1221 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 NPAS3Q8IXF0 933 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 C12orf56Q8IXR9 622 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 ALDH16A1Q8IZ83 802 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 RIBC1Q8N443 379 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 ZFRQ96KR1 1074 aaKnown RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 RNF157Q96PX1 679 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 NTPCRQ9BSD7 190 aaKnown RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 ATG10Q9H0Y0 220 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 SERHL2Q9H4I8 314 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 SERHLQ9NQF3 203 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 GHRLQ9UBU3 117 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 STOML2Q9UJZ1 356 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 FBXO4Q9UKT5 387 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 MCTS1Q9ULC4 181 aaKnown RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 PCDHGA5Q9Y5G8 931 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 IRAK3Q9Y616 596 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 YJEFN3A6XGL0 299 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 IDSB3KWA1 339 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 SNPHO15079 494 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 FANCGO15287 622 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 NDUFS4O43181 175 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 RBMXL2O75526 392 aaKnown RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 RARAP10276 462 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 RNH1P13489 461 aaKnown RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 EDNRBP24530 442 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 SSTP61278 116 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 RING1Q06587 406 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 PFKFB4Q16877 469 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 PRAMEF13Q5VWM6 474 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 EMBQ6PCB8 327 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 MSANTD1Q6ZTZ1 278 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 TTLL10Q6ZVT0 673 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 AKAP1Q92667 903 aaKnown RBP eCLIP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 Q9N2J8 555 aa4.91□□□□□ -1.62
SCN1A-218ENST00000640036 NXT1Q9UKK6 140 aaKnown RBP4.91□□□□□ -1.62
SCN1A-218ENST00000640036 ANGPT4Q9Y264 503 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms