RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 MATN4O95460 622 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 GSCP56915 257 aaPredicted RBP18.14■□□□□ 0.49
SCARB2-213ENST00000638680 AP1S1P61966 158 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 HMGCS1Q01581 520 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 CAMK1Q14012 370 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 RUNDC3AQ59EK9 446 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 SLC2A7Q6PXP3 512 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 SNX20Q7Z614 316 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 PCDHGA11Q9Y5H2 935 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 DAPL1A0PJW8 107 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 H0YGN5 161 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 CXCL14O95715 111 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 HLA-DQB2P05538 268 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 PDHA2P29803 388 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 PSMD8P48556 350 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 IST1P53990 364 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 SLC18A2Q05940 514 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 ATP13A5Q4VNC0 1218 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 CGREF1Q99674 301 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 PADI3Q9ULW8 664 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 PCDHGA3Q9Y5H0 932 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 NFS1Q9Y697 457 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 PEX10O60683 326 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 IGFALSP35858 605 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 XKP51811 444 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 CD83Q01151 205 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 TMEM192Q8IY95 271 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 CMASQ8NFW8 434 aaPredicted RBP18.14■□□□□ 0.49
SCARB2-213ENST00000638680 CRELD1Q96HD1 420 aa18.14■□□□□ 0.49
SCARB2-213ENST00000638680 GSTT2BP0CG30 244 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 PCSK2P16519 638 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 PPP1R8Q12972 351 aaKnown RBP18.13■□□□□ 0.49
SCARB2-213ENST00000638680 SYPL2Q5VXT5 272 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 ASB18Q6ZVZ8 466 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 AASSQ9UDR5 926 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 PLOD2O00469 737 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 IDSP22304 550 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 NSG1P42857 185 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 KHKP50053 298 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 TUBA4AP68366 448 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 TSC22D1Q15714 1073 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 FBXL20Q96IG2 436 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 KCTD7Q96MP8 289 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 COMMD4Q9H0A8 199 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 TTC24A2A3L6 582 aaPredicted RBP18.13■□□□□ 0.49
SCARB2-213ENST00000638680 GNRH1P01148 92 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 DPY19L1Q2PZI1 675 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 TMEM220Q6QAJ8 160 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 LGI4Q8N135 537 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 UPF1Q92900 1129 aaKnown RBP eCLIP18.13■□□□□ 0.496e-7■■■□□ 18.3
SCARB2-213ENST00000638680 GAL3ST1Q99999 423 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 ZBTB26Q9HCK0 441 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 RIMS1Q86UR5 1692 aaKnown RBP18.13■□□□□ 0.49
SCARB2-213ENST00000638680 MSCO60682 206 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 ITGB1P05556 798 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 AKT2P31751 481 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 DGKQP52824 942 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 SLC10A7Q0GE19 358 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 EHD1Q9H4M9 534 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 EXO5Q9H790 373 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 TEX264Q9Y6I9 313 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 ENGP17813 658 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 GNALP38405 381 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 GSK3BP49841 420 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 DSC3Q14574 896 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 NAPRTQ6XQN6 538 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 IFT46Q9NQC8 304 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 FZD4Q9ULV1 537 aa18.13■□□□□ 0.49
SCARB2-213ENST00000638680 NIPSNAP2O75323 286 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 MBLAC2Q68D91 279 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 KIAA1161Q6NSJ0 714 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 CYP2S1Q96SQ9 504 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 NTPCRQ9BSD7 190 aaKnown RBP18.12■□□□□ 0.49
SCARB2-213ENST00000638680 TRIM2Q9C040 744 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 MFSD1Q9H3U5 465 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 TCF7L1Q9HCS4 588 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 SPEF1Q9Y4P9 236 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 TLR4O00206 839 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 RBMXL2O75526 392 aaKnown RBP18.12■□□□□ 0.49
SCARB2-213ENST00000638680 CMPK1P30085 196 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 TM4SF1P30408 202 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 AP2S1P53680 142 aaPredicted RBP18.12■□□□□ 0.49
SCARB2-213ENST00000638680 MC1RQ01726 317 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 MSANTD2Q6P1R3 559 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 SYCE2Q6PIF2 218 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 ERMP1Q7Z2K6 904 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 ZNF615Q8N8J6 731 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 OR2L5Q8NG80 312 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 C9orf43Q8TAL5 461 aaPredicted RBP18.12■□□□□ 0.49
SCARB2-213ENST00000638680 C17orf50Q8WW18 174 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 IL4I1Q96RQ9 567 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 PCDH7O60245 1069 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 IL7RP16871 459 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 ACSL1P33121 698 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 KLHL36Q8N4N3 616 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 ZBTB8BQ8NAP8 495 aaPredicted RBP18.12■□□□□ 0.49
SCARB2-213ENST00000638680 TMEM203Q969S6 136 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 CST11Q9H112 138 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 FBXL21Q9UKT6 434 aa18.12■□□□□ 0.49
SCARB2-213ENST00000638680 PDCD5O14737 125 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms