RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 ITGA1P56199 1179 aa16.19■□□□□ 0.18
CACNA1A-259ENST00000638114 RPS15P62841 145 aaKnown RBP16.19■□□□□ 0.18
CACNA1A-259ENST00000638114 KIR2DS3Q14952 304 aa16.19■□□□□ 0.18
CACNA1A-259ENST00000638114 TYSND1Q2T9J0 566 aa16.19■□□□□ 0.18
CACNA1A-259ENST00000638114 CTSL3PQ5NE16 218 aa16.19■□□□□ 0.18
CACNA1A-259ENST00000638114 ARMC3Q5W041 872 aa16.19■□□□□ 0.18
CACNA1A-259ENST00000638114 SLC38A9Q8NBW4 561 aa16.19■□□□□ 0.18
CACNA1A-259ENST00000638114 MCUQ8NE86 351 aa16.19■□□□□ 0.18
CACNA1A-259ENST00000638114 LPGAT1Q92604 370 aa16.19■□□□□ 0.18
CACNA1A-259ENST00000638114 ZNF669Q96BR6 464 aaPredicted RBP16.19■□□□□ 0.18
CACNA1A-259ENST00000638114 SERPINB12Q96P63 405 aa16.19■□□□□ 0.18
CACNA1A-259ENST00000638114 TWSG1Q9GZX9 223 aa16.19■□□□□ 0.18
CACNA1A-259ENST00000638114 SLC25A18Q9H1K4 315 aa16.19■□□□□ 0.18
CACNA1A-259ENST00000638114 ACTR5Q9H9F9 607 aaPredicted RBP16.19■□□□□ 0.18
CACNA1A-259ENST00000638114 IL1RAPL1Q9NZN1 696 aa16.19■□□□□ 0.18
CACNA1A-259ENST00000638114 POLHQ9Y253 713 aa16.19■□□□□ 0.18
CACNA1A-259ENST00000638114 NEU2Q9Y3R4 380 aa16.19■□□□□ 0.18
CACNA1A-259ENST00000638114 FAM237BA0A1B0GVD1 139 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 SDR42E2A6NKP2 422 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 CES2O00748 559 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 SLC28A2O43868 658 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 FURINP09958 794 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 OGNP20774 298 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 PTPN4P29074 926 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 PEBP1P30086 187 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 RPS18P62269 152 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 NFKB2Q00653 900 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 DHX34Q14147 1143 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 PPP1R7Q15435 360 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 ZIC1Q15915 447 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 KYNUQ16719 465 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 SLC5A12Q1EHB4 618 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 DEFB110Q30KQ9 67 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 ANKRD20A4Q4UJ75 823 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 ZNF789Q5FWF6 425 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 PLEKHS1Q5SXH7 462 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 NEPROQ6NW34 567 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 TTC23LQ6PF05 361 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 PRICKLE2Q7Z3G6 844 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 C2orf73Q8N5S3 287 aaPredicted RBP16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 LMNTD1Q8N9Z9 388 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 FLVCR1-AS1Q8TAF5 88 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 FAM136AQ96C01 138 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 TCTN2Q96GX1 697 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 LRFN5Q96NI6 719 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 BIRC8Q96P09 236 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 IL17FQ96PD4 163 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 TCF12Q99081 682 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 GPR87Q9BY21 358 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 CHST8Q9H2A9 424 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 FAM60AQ9NP50 221 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 TSR3Q9UJK0 312 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 TUBD1Q9UJT1 453 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 SLC39A10Q9ULF5 831 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 CRYL1Q9Y2S2 319 aa16.18■□□□□ 0.18
CACNA1A-259ENST00000638114 MAGEB16A2A368 324 aa16.17■□□□□ 0.18
CACNA1A-259ENST00000638114 E7EQ34 232 aa16.17■□□□□ 0.18
CACNA1A-259ENST00000638114 H3BMM5 538 aa16.17■□□□□ 0.18
CACNA1A-259ENST00000638114 MEN1O00255 615 aa16.17■□□□□ 0.18
CACNA1A-259ENST00000638114 NIPSNAP2O75323 286 aa16.17■□□□□ 0.18
CACNA1A-259ENST00000638114 SNRNP200O75643 2136 aaKnown RBP16.17■□□□□ 0.18
CACNA1A-259ENST00000638114 ESR1P03372 595 aa16.17■□□□□ 0.18
CACNA1A-259ENST00000638114 CD9P21926 228 aa16.17■□□□□ 0.18
CACNA1A-259ENST00000638114 THOC5Q13769 683 aaKnown RBP16.17■□□□□ 0.18
CACNA1A-259ENST00000638114 ZNF470Q6ECI4 717 aa16.17■□□□□ 0.18
CACNA1A-259ENST00000638114 TMEM135Q86UB9 458 aa16.17■□□□□ 0.18
CACNA1A-259ENST00000638114 TAX1BP1Q86VP1 789 aa16.17■□□□□ 0.18
CACNA1A-259ENST00000638114 CILP2Q8IUL8 1156 aa16.17■□□□□ 0.18
CACNA1A-259ENST00000638114 GPR135Q8IZ08 494 aa16.17■□□□□ 0.18
CACNA1A-259ENST00000638114 DSELQ8IZU8 1212 aa16.17■□□□□ 0.18
CACNA1A-259ENST00000638114 NAT8LQ8N9F0 302 aa16.17■□□□□ 0.18
CACNA1A-259ENST00000638114 LINC01555Q8NAE3 123 aa16.17■□□□□ 0.18
CACNA1A-259ENST00000638114 FOPNLQ96NB1 174 aa16.17■□□□□ 0.18
CACNA1A-259ENST00000638114 PCMTD2Q9NV79 361 aa16.17■□□□□ 0.18
CACNA1A-259ENST00000638114 RUVBL2Q9Y230 463 aaKnown RBP16.17■□□□□ 0.18
CACNA1A-259ENST00000638114 FARSAQ9Y285 508 aaKnown RBP16.17■□□□□ 0.18
CACNA1A-259ENST00000638114 KCNMB2Q9Y691 235 aa16.17■□□□□ 0.18
CACNA1A-259ENST00000638114 NFS1Q9Y697 457 aa16.17■□□□□ 0.18
CACNA1A-259ENST00000638114 MAD1L1Q9Y6D9 718 aa16.17■□□□□ 0.18
CACNA1A-259ENST00000638114 USP27XA6NNY8 438 aa16.16■□□□□ 0.18
CACNA1A-259ENST00000638114 J3QKU1 62 aa16.16■□□□□ 0.18
CACNA1A-259ENST00000638114 RASGRF2O14827 1237 aa16.16■□□□□ 0.18
CACNA1A-259ENST00000638114 ZNF749O43361 778 aa16.16■□□□□ 0.18
CACNA1A-259ENST00000638114 TCP1P17987 556 aaKnown RBP16.16■□□□□ 0.18
CACNA1A-259ENST00000638114 CHRM3P20309 590 aa16.16■□□□□ 0.18
CACNA1A-259ENST00000638114 RORAP35398 523 aa16.16■□□□□ 0.18
CACNA1A-259ENST00000638114 BDKRB1P46663 353 aa16.16■□□□□ 0.18
CACNA1A-259ENST00000638114 GRB7Q14451 532 aa16.16■□□□□ 0.18
CACNA1A-259ENST00000638114 PTCHD3Q3KNS1 767 aa16.16■□□□□ 0.18
CACNA1A-259ENST00000638114 CNSTQ6PJW8 725 aa16.16■□□□□ 0.18
CACNA1A-259ENST00000638114 ZNF517Q6ZMY9 492 aaPredicted RBP16.16■□□□□ 0.18
CACNA1A-259ENST00000638114 CENPUQ71F23 418 aa16.16■□□□□ 0.18
CACNA1A-259ENST00000638114 FAM20CQ8IXL6 584 aa16.16■□□□□ 0.18
CACNA1A-259ENST00000638114 PPIL6Q8IXY8 311 aa16.16■□□□□ 0.18
CACNA1A-259ENST00000638114 OR2L8Q8NGY9 312 aa16.16■□□□□ 0.18
CACNA1A-259ENST00000638114 C9orf43Q8TAL5 461 aaPredicted RBP16.16■□□□□ 0.18
CACNA1A-259ENST00000638114 SEC14L1Q92503 715 aa16.16■□□□□ 0.18
CACNA1A-259ENST00000638114 SLC22A18Q96BI1 424 aa16.16■□□□□ 0.18
CACNA1A-259ENST00000638114 MENTQ9BUN1 341 aa16.16■□□□□ 0.18
CACNA1A-259ENST00000638114 DDX47Q9H0S4 455 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms