RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 TCF3P15923 654 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 ST8SIA6P61647 398 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 GRIN2CQ14957 1233 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 GPR33Q49SQ1 333 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 DEPDC1Q5TB30 811 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 CLYBLQ8N0X4 340 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 ADCY4Q8NFM4 1077 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 COPS8Q99627 209 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 MEAF6Q9HAF1 191 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 HPS4Q9NQG7 708 aa11.27□□□□□ -0.61
CLN6-217ENST00000636964 TRNAU1APQ9NX07 287 aaKnown RBP11.27□□□□□ -0.61
CLN6-217ENST00000636964 C16orf96A6NNT2 1141 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 AKT1P31749 480 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 PKNOX1P55347 436 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 NME5P56597 212 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 GALNT1Q10472 559 aaPredicted RBP11.26□□□□□ -0.61
CLN6-217ENST00000636964 RBBP7Q16576 425 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 BRAT1Q6PJG6 821 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 RFPL4BQ6ZWI9 263 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 VASH1Q7L8A9 365 aaPredicted RBP11.26□□□□□ -0.61
CLN6-217ENST00000636964 TBC1D20Q96BZ9 403 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 LRGUKQ96M69 825 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 HGH1Q9BTY7 390 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 SLC28A3Q9HAS3 691 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 LATS2Q9NRM7 1088 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 DEC1Q9P2X7 70 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 ZMYM5Q9UJ78 669 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 AZIN1O14977 448 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 PIP5K1BO14986 540 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 CRCPO75575 148 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 ZBTB11O95625 1053 aaPredicted RBP11.26□□□□□ -0.61
CLN6-217ENST00000636964 S100BP04271 92 aaPredicted RBP11.26□□□□□ -0.61
CLN6-217ENST00000636964 CD9P21926 228 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 RPS3P23396 243 aaKnown RBP eCLIP11.26□□□□□ -0.61
CLN6-217ENST00000636964 TSPAN7P41732 249 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 ACADVLP49748 655 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 NUDT2P50583 147 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 TXNL4AP83876 142 aaKnown RBP11.26□□□□□ -0.61
CLN6-217ENST00000636964 PHKG1Q16816 387 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 FNDC3BQ53EP0 1204 aaKnown RBP11.26□□□□□ -0.61
CLN6-217ENST00000636964 PIGGQ5H8A4 983 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 TUBA3EQ6PEY2 450 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 SBSNQ6UWP8 590 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 PRR23CQ6ZRP0 262 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 ZBTB2Q8N680 514 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 TWIST2Q8WVJ9 160 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 DLG3Q92796 817 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 C19orf60Q96EN9 201 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 PLEKHA8Q96JA3 519 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 FAR2Q96K12 515 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 WRAP53Q9BUR4 548 aaKnown RBP11.26□□□□□ -0.61
CLN6-217ENST00000636964 PAIP1Q9H074 479 aaKnown RBP11.26□□□□□ -0.61
CLN6-217ENST00000636964 NSUN3Q9H649 340 aaKnown RBP11.26□□□□□ -0.61
CLN6-217ENST00000636964 ZDHHC3Q9NYG2 299 aa11.26□□□□□ -0.61
CLN6-217ENST00000636964 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 CXorf51AA0A1B0GTR3 108 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 RGSL1A5PLK6 1076 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 PSMD12O00232 456 aaPredicted RBP11.25□□□□□ -0.61
CLN6-217ENST00000636964 UBDO15205 165 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 H6PDO95479 791 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 GDF5P43026 501 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 HSPA14Q0VDF9 509 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 LCP2Q13094 533 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 KCNC3Q14003 757 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 SPIDRQ14159 915 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 GAB4Q2WGN9 574 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 GPRC6AQ5T6X5 926 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 MBOAT1Q6ZNC8 495 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 GK5Q6ZS86 529 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 ETFBKMTQ8IXQ9 262 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 FAM156AQ8NDB6 213 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 BHLHE22Q8NFJ8 381 aaPredicted RBP11.25□□□□□ -0.61
CLN6-217ENST00000636964 OR52B6Q8NGF0 335 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 SKA2Q8WVK7 121 aaPredicted RBP11.25□□□□□ -0.61
CLN6-217ENST00000636964 GIMAP5Q96F15 307 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 ACOX2Q99424 681 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 SLC29A1Q99808 456 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 GPATCH1Q9BRR8 931 aaKnown RBP11.25□□□□□ -0.61
CLN6-217ENST00000636964 RIOK2Q9BVS4 552 aaKnown RBP11.25□□□□□ -0.61
CLN6-217ENST00000636964 NAA50Q9GZZ1 169 aaKnown RBP11.25□□□□□ -0.61
CLN6-217ENST00000636964 TUBB1Q9H4B7 451 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 FAM83DQ9H4H8 585 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 CAAP1Q9H8G2 361 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 ZNF225Q9UK10 706 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 PCTPQ9UKL6 214 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 ATG2AQ2TAZ0 1938 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 UPK3BL1B0FP48 263 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 UPK3BL2E5RIL1 263 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 J3QRK9 145 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 HOXC11O43248 304 aaPredicted RBP11.25□□□□□ -0.61
CLN6-217ENST00000636964 RPS17P08708 135 aaKnown RBP11.25□□□□□ -0.61
CLN6-217ENST00000636964 OCM2P0CE71 109 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 OCMP0CE72 109 aaPredicted RBP11.25□□□□□ -0.61
CLN6-217ENST00000636964 PSMC3P17980 439 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 VIPR1P32241 457 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 NSG1P42857 185 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 B2MP61769 119 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 ATP1A4Q13733 1029 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 ZNF805Q5CZA5 627 aa11.25□□□□□ -0.61
CLN6-217ENST00000636964 LYPLAL1Q5VWZ2 237 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms