RNA–Protein interactions for RNA: ENST00000636868.1

ATRX-222, Transcript of ATRX, chromatin remodeler, human

TSL 5

Gene ATRX, Length 100 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATRX-222	ENST00000636868	CD1E	P15812	388 aa		0.8	□□□□□ -2.28
ATRX-222	ENST00000636868	GPX3	P22352	226 aa		0.8	□□□□□ -2.28
ATRX-222	ENST00000636868	UFM1	P61960	85 aa		0.8	□□□□□ -2.28
ATRX-222	ENST00000636868	CX3CL1	P78423	397 aa		0.8	□□□□□ -2.28
ATRX-222	ENST00000636868	FKBP3	Q00688	224 aa	Known RBP	0.8	□□□□□ -2.28
ATRX-222	ENST00000636868	ITGA7	Q13683	1181 aa		0.8	□□□□□ -2.28
ATRX-222	ENST00000636868	ADAL	Q6DHV7	355 aa		0.8	□□□□□ -2.28
ATRX-222	ENST00000636868	ASPHD2	Q6ICH7	369 aa		0.8	□□□□□ -2.28
ATRX-222	ENST00000636868	CCDC174	Q6PII3	467 aa		0.8	□□□□□ -2.28
ATRX-222	ENST00000636868	HIPK1	Q86Z02	1210 aa		0.8	□□□□□ -2.28
ATRX-222	ENST00000636868	RNF138	Q8WVD3	245 aa		0.8	□□□□□ -2.28
ATRX-222	ENST00000636868	APOBEC4	Q8WW27	367 aa	Known RBP	0.8	□□□□□ -2.28
ATRX-222	ENST00000636868	NUP85	Q9BW27	656 aa		0.8	□□□□□ -2.28
ATRX-222	ENST00000636868	INTS2	Q9H0H0	1204 aa	Known RBP	0.8	□□□□□ -2.28
ATRX-222	ENST00000636868	FGF21	Q9NSA1	209 aa		0.8	□□□□□ -2.28
ATRX-222	ENST00000636868	CLEC4E	Q9ULY5	219 aa		0.8	□□□□□ -2.28
ATRX-222	ENST00000636868	MAU2	Q9Y6X3	613 aa		0.8	□□□□□ -2.28
ATRX-222	ENST00000636868	TTC36	A6NLP5	189 aa		0.79	□□□□□ -2.28
ATRX-222	ENST00000636868	LRRC53	A6NM62	1247 aa		0.79	□□□□□ -2.28
ATRX-222	ENST00000636868	GLRA3	O75311	464 aa		0.79	□□□□□ -2.28
ATRX-222	ENST00000636868	VENTX	O95231	258 aa		0.79	□□□□□ -2.28
ATRX-222	ENST00000636868	TIMM50	Q3ZCQ8	353 aa		0.79	□□□□□ -2.28
ATRX-222	ENST00000636868	GALNT13	Q8IUC8	556 aa		0.79	□□□□□ -2.28
ATRX-222	ENST00000636868	CEP97	Q8IW35	865 aa		0.79	□□□□□ -2.28
ATRX-222	ENST00000636868	C9orf43	Q8TAL5	461 aa	Predicted RBP	0.79	□□□□□ -2.28
ATRX-222	ENST00000636868	GSDMB	Q8TAX9	411 aa		0.79	□□□□□ -2.28
ATRX-222	ENST00000636868	FAM122A	Q96E09	287 aa		0.79	□□□□□ -2.28
ATRX-222	ENST00000636868	FAM218A	Q96MZ4	157 aa		0.79	□□□□□ -2.28
ATRX-222	ENST00000636868	SPAG5	Q96R06	1193 aa		0.79	□□□□□ -2.28
ATRX-222	ENST00000636868	C1QTNF1	Q9BXJ1	281 aa		0.79	□□□□□ -2.28
ATRX-222	ENST00000636868	PANK2	Q9BZ23	570 aa		0.79	□□□□□ -2.28
ATRX-222	ENST00000636868	S1PR5	Q9H228	398 aa		0.79	□□□□□ -2.28
ATRX-222	ENST00000636868	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	0.79	□□□□□ -2.28
ATRX-222	ENST00000636868	COL1A2	P08123	1366 aa		0.79	□□□□□ -2.28
ATRX-222	ENST00000636868	ELOVL7	A1L3X0	281 aa		0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	GAGE10	A6NGK3	116 aa		0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	GAPDHS	O14556	408 aa	Predicted RBP	0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	EPHB6	O15197	1021 aa		0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	TSPAN3	O60637	253 aa		0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	CDK2AP2	O75956	126 aa		0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	COX7A2	P14406	83 aa		0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	PIP4K2A	P48426	406 aa	Predicted RBP	0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	WNT4	P56705	351 aa		0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	CDH18	Q13634	790 aa		0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	BLMH	Q13867	455 aa		0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	ZNF74	Q16587	644 aa		0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	MEP1A	Q16819	746 aa		0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	SLC9B1	Q4ZJI4	515 aa		0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	WDR45B	Q5MNZ6	344 aa		0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	GCNT6	Q5T4J0	391 aa		0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	LINGO4	Q6UY18	593 aa		0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	PCYOX1L	Q8NBM8	494 aa		0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	ZNF540	Q8NDQ6	660 aa		0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	AFAP1L1	Q8TED9	768 aa		0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	PHLDA1	Q8WV24	401 aa	Predicted RBP	0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	NTNG2	Q96CW9	530 aa		0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	SIPA1	Q96FS4	1042 aa		0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	TMEM68	Q96MH6	324 aa		0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	COG8	Q96MW5	612 aa		0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	DGAT2	Q96PD7	388 aa		0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	LRRCC1	Q9C099	1032 aa		0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	OR2B2	Q9GZK3	357 aa		0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	WDR12	Q9GZL7	423 aa	Known RBP	0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	VN1R1	Q9GZP7	353 aa		0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	ARRDC1-AS1	Q9H2J1	176 aa		0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	EPB41L5	Q9HCM4	733 aa		0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	TSPYL4	Q9UJ04	414 aa		0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	LRCH1	Q9Y2L9	728 aa		0.78	□□□□□ -2.28
ATRX-222	ENST00000636868	CAND2	O75155	1236 aa		0.77	□□□□□ -2.29
ATRX-222	ENST00000636868	GJB3	O75712	270 aa		0.77	□□□□□ -2.29
ATRX-222	ENST00000636868	NXPH4	O95158	308 aa		0.77	□□□□□ -2.29
ATRX-222	ENST00000636868	TRUB2	O95900	331 aa	Known RBP	0.77	□□□□□ -2.29
ATRX-222	ENST00000636868	ODC1	P11926	461 aa		0.77	□□□□□ -2.29
ATRX-222	ENST00000636868	NR2C1	P13056	603 aa		0.77	□□□□□ -2.29
ATRX-222	ENST00000636868	VEGFA	P15692	232 aa	Predicted RBP	0.77	□□□□□ -2.29
ATRX-222	ENST00000636868	RPL21	P46778	160 aa	Known RBP	0.77	□□□□□ -2.29
ATRX-222	ENST00000636868	NDUFV3	P56181	108 aa	Known RBP	0.77	□□□□□ -2.29
ATRX-222	ENST00000636868	MRPS34	P82930	218 aa	Known RBP	0.77	□□□□□ -2.29
ATRX-222	ENST00000636868	GAGE2B	Q13066	116 aa		0.77	□□□□□ -2.29
ATRX-222	ENST00000636868	EFR3A	Q14156	821 aa		0.77	□□□□□ -2.29
ATRX-222	ENST00000636868	NFIL3	Q16649	462 aa		0.77	□□□□□ -2.29
ATRX-222	ENST00000636868	GAGE2E	Q4V326	116 aa		0.77	□□□□□ -2.29
ATRX-222	ENST00000636868	PDLIM3	Q53GG5	364 aa	Predicted RBP	0.77	□□□□□ -2.29
ATRX-222	ENST00000636868	C9orf66	Q5T8R8	295 aa		0.77	□□□□□ -2.29
ATRX-222	ENST00000636868	GAGE2A	Q6NT46	116 aa		0.77	□□□□□ -2.29
ATRX-222	ENST00000636868	EID3	Q8N140	333 aa		0.77	□□□□□ -2.29
ATRX-222	ENST00000636868	ITLN1	Q8WWA0	313 aa		0.77	□□□□□ -2.29
ATRX-222	ENST00000636868	GTF3C6	Q969F1	213 aa		0.77	□□□□□ -2.29
ATRX-222	ENST00000636868	REEP2	Q9BRK0	252 aa		0.77	□□□□□ -2.29
ATRX-222	ENST00000636868	RBM24	Q9BX46	236 aa	Known RBP	0.77	□□□□□ -2.29
ATRX-222	ENST00000636868	DEFB126	Q9BYW3	111 aa		0.77	□□□□□ -2.29
ATRX-222	ENST00000636868	OCR1	Q9BZK8	76 aa		0.77	□□□□□ -2.29
ATRX-222	ENST00000636868	NPAP1	Q9NZP6	1156 aa		0.77	□□□□□ -2.29
ATRX-222	ENST00000636868	CWC15	Q9P013	229 aa	Known RBP	0.77	□□□□□ -2.29
ATRX-222	ENST00000636868	ABI3	Q9P2A4	366 aa		0.77	□□□□□ -2.29
ATRX-222	ENST00000636868	GAGE2D	Q9UEU5	116 aa		0.77	□□□□□ -2.29
ATRX-222	ENST00000636868	FBXW11	Q9UKB1	542 aa		0.77	□□□□□ -2.29
ATRX-222	ENST00000636868	ANKRD61	A6NGH8	418 aa		0.76	□□□□□ -2.29
ATRX-222	ENST00000636868	GPC4	O75487	556 aa		0.76	□□□□□ -2.29

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms