RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.55□□□□□ -1.36
UPF3B-205ENST00000636792 UBAP2Q5T6F2 1119 aaKnown RBP6.55□□□□□ -1.36
UPF3B-205ENST00000636792 MROH9Q5TGP6 573 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 AGBL2Q5U5Z8 902 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 KLHL35Q6PF15 583 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 IYDQ6PHW0 289 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 LAYNQ6UX15 382 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 RAPH1Q70E73 1250 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 ZNF438Q7Z4V0 828 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 CLEC14AQ86T13 490 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 TRABD2AQ86V40 505 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 TRIM48Q8IWZ4 208 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 CPNE9Q8IYJ1 553 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 ZNF295-AS1Q8N0V1 137 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 TCAIMQ8N3R3 496 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 ACVR1CQ8NER5 493 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 GIMAP7Q8NHV1 300 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 HMGCLL1Q8TB92 370 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 STAG3L4Q8TBR4 150 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 RDH11Q8TC12 318 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 MAPK15Q8TD08 544 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 LKAAEAR1Q8TD35 194 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 NETO1Q8TDF5 533 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 LMX1AQ8TE12 382 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 EPS8L3Q8TE67 593 aaKnown RBP6.55□□□□□ -1.36
UPF3B-205ENST00000636792 ZDHHC1Q8WTX9 485 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 ATL1Q8WXF7 558 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 ASB11Q8WXH4 323 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 TP53INP1Q96A56 240 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 KIAA1191Q96A73 305 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 RAD51AP1Q96B01 352 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 CXorf40BQ96DE9 158 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 CCDC126Q96EE4 140 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 CCDC97Q96F63 343 aaPredicted RBP6.55□□□□□ -1.36
UPF3B-205ENST00000636792 NDNQ99608 321 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 CDC6Q99741 560 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 OLFM1Q99784 485 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 SH3GL2Q99962 352 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 TRIT1Q9H3H1 467 aaKnown RBP6.55□□□□□ -1.36
UPF3B-205ENST00000636792 TFB2MQ9H5Q4 396 aaKnown RBP6.55□□□□□ -1.36
UPF3B-205ENST00000636792 KIR3DX1Q9H7L2 352 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 MED4Q9NPJ6 270 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 SLC17A6Q9P2U8 582 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 SLC23A2Q9UGH3 650 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 DCDC2Q9UHG0 476 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 GRID1Q9ULK0 1009 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 PNMA8BQ9ULN7 279 aaPredicted RBP6.55□□□□□ -1.36
UPF3B-205ENST00000636792 KCNK6Q9Y257 313 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 MTO1Q9Y2Z2 717 aaKnown RBP6.55□□□□□ -1.36
UPF3B-205ENST00000636792 SDK1Q7Z5N4 2213 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 KNL1Q8NG31 2342 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 EME2A4GXA9 379 aaPredicted RBP6.54□□□□□ -1.36
UPF3B-205ENST00000636792 IQCF5A8MTL0 148 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 HMGB1P1B2RPK0 211 aaPredicted RBP6.54□□□□□ -1.36
UPF3B-205ENST00000636792 PATE3B3GLJ2 98 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 MYO1CO00159 1063 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 CDX4O14627 284 aaPredicted RBP6.54□□□□□ -1.36
UPF3B-205ENST00000636792 TM9SF1O15321 606 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 YY2O15391 372 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 ZBTB14O43829 449 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 KERAO60938 352 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 RFPL1O75677 317 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 SNUPNO95149 360 aaKnown RBP6.54□□□□□ -1.36
UPF3B-205ENST00000636792 MT-ND3P03897 115 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 HIST1H2AGP0C0S8 130 aaPredicted RBP6.54□□□□□ -1.36
UPF3B-205ENST00000636792 CCDC166P0CW27 439 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 GIMD1P0DJR0 217 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 CKMT1AP12532 417 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 BRAFP15056 766 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 GLB1P16278 677 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 HIST1H2ADP20671 130 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 TGM1P22735 817 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 MAP4P27816 1152 aaKnown RBP6.54□□□□□ -1.36
UPF3B-205ENST00000636792 PBLDP30039 288 aaPredicted RBP6.54□□□□□ -1.36
UPF3B-205ENST00000636792 NFKB2Q00653 900 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 TIAL1Q01085 375 aaKnown RBP eCLIP6.54□□□□□ -1.36
UPF3B-205ENST00000636792 HHEXQ03014 270 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 SLC18A2Q05940 514 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 SPEM2Q0P670 501 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 BMPR2Q13873 1038 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 ZNF648Q5T619 568 aaPredicted RBP6.54□□□□□ -1.36
UPF3B-205ENST00000636792 SLC30A9Q6PML9 568 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 PAQR3Q6TCH7 311 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 XKR5Q6UX68 686 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 KDM7AQ6ZMT4 941 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 C8orf86Q6ZUL3 223 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 FRA10AC1Q70Z53 315 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 RD3Q7Z3Z2 195 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 GLRX5Q86SX6 157 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 CEP97Q8IW35 865 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 CFAP206Q8IYR0 622 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 CENPLQ8N0S6 344 aaPredicted RBP6.54□□□□□ -1.36
UPF3B-205ENST00000636792 NAGSQ8N159 534 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 KRT222Q8N1A0 295 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 SIDT2Q8NBJ9 832 aaKnown RBP6.54□□□□□ -1.36
UPF3B-205ENST00000636792 UHMK1Q8TAS1 419 aaKnown RBP6.54□□□□□ -1.36
UPF3B-205ENST00000636792 BAHD1Q8TBE0 780 aaPredicted RBP6.54□□□□□ -1.36
UPF3B-205ENST00000636792 MCOLN3Q8TDD5 553 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 TFGQ92734 400 aaPredicted RBP6.54□□□□□ -1.36
UPF3B-205ENST00000636792 SLC22A18Q96BI1 424 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms