RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 EURLQ9NYK6 297 aa17.39■□□□□ 0.37
CLN6-212ENST00000636020 FLNAP21333 2647 aaKnown RBP17.39■□□□□ 0.37
CLN6-212ENST00000636020 GTF3C1Q12789 2109 aa17.39■□□□□ 0.37
CLN6-212ENST00000636020 INTS1Q8N201 2190 aaKnown RBP17.38■□□□□ 0.37
CLN6-212ENST00000636020 JMJD1CQ15652 2540 aa17.38■□□□□ 0.37
CLN6-212ENST00000636020 A0A0J9YY10 115 aa17.38■□□□□ 0.37
CLN6-212ENST00000636020 BUD23O43709 281 aaKnown RBP17.38■□□□□ 0.37
CLN6-212ENST00000636020 PRAMEF1O95521 474 aa17.38■□□□□ 0.37
CLN6-212ENST00000636020 ACPPP15309 386 aa17.38■□□□□ 0.37
CLN6-212ENST00000636020 FOSL1P15407 271 aa17.38■□□□□ 0.37
CLN6-212ENST00000636020 FDXRP22570 491 aa17.38■□□□□ 0.37
CLN6-212ENST00000636020 CACNG1Q06432 222 aa17.38■□□□□ 0.37
CLN6-212ENST00000636020 FOXD4Q12950 439 aaPredicted RBP17.38■□□□□ 0.37
CLN6-212ENST00000636020 BOP1Q14137 746 aaKnown RBP17.38■□□□□ 0.37
CLN6-212ENST00000636020 ATG9BQ674R7 924 aa17.38■□□□□ 0.37
CLN6-212ENST00000636020 UNC5AQ6ZN44 842 aa17.38■□□□□ 0.37
CLN6-212ENST00000636020 DENND1AQ8TEH3 1009 aa17.38■□□□□ 0.37
CLN6-212ENST00000636020 FAF2Q96CS3 445 aa17.38■□□□□ 0.37
CLN6-212ENST00000636020 TRIM11Q96F44 468 aa17.38■□□□□ 0.37
CLN6-212ENST00000636020 BTBD6Q96KE9 485 aa17.38■□□□□ 0.37
CLN6-212ENST00000636020 HGH1Q9BTY7 390 aa17.38■□□□□ 0.37
CLN6-212ENST00000636020 CRB3Q9BUF7 120 aa17.38■□□□□ 0.37
CLN6-212ENST00000636020 RNF32Q9H0A6 362 aa17.38■□□□□ 0.37
CLN6-212ENST00000636020 SPHK1Q9NYA1 384 aa17.38■□□□□ 0.37
CLN6-212ENST00000636020 ICKQ9UPZ9 632 aa17.38■□□□□ 0.37
CLN6-212ENST00000636020 SNRNP200O75643 2136 aaKnown RBP17.38■□□□□ 0.37
CLN6-212ENST00000636020 IFRD1O00458 451 aaPredicted RBP17.37■□□□□ 0.37
CLN6-212ENST00000636020 DDX3XO00571 662 aaKnown RBP eCLIP17.37■□□□□ 0.372e-13■■■□□ 16.8
CLN6-212ENST00000636020 DSCR3O14972 297 aa17.37■□□□□ 0.37
CLN6-212ENST00000636020 CD151P48509 253 aa17.37■□□□□ 0.37
CLN6-212ENST00000636020 CT47A1Q5JQC4 288 aaPredicted RBP17.37■□□□□ 0.37
CLN6-212ENST00000636020 ZNF571Q7Z3V5 609 aaPredicted RBP17.37■□□□□ 0.37
CLN6-212ENST00000636020 CA5BP1Q8WTZ4 195 aa17.37■□□□□ 0.37
CLN6-212ENST00000636020 PHF10Q8WUB8 498 aaKnown RBP17.37■□□□□ 0.37
CLN6-212ENST00000636020 C8orf44Q96CB5 159 aa17.37■□□□□ 0.37
CLN6-212ENST00000636020 ERGIC2Q96RQ1 377 aa17.37■□□□□ 0.37
CLN6-212ENST00000636020 IP6K2Q9UHH9 426 aa17.37■□□□□ 0.37
CLN6-212ENST00000636020 LOC285095A0A1B0GVY8 99 aa17.36■□□□□ 0.37
CLN6-212ENST00000636020 LGALS16A8MUM7 142 aa17.36■□□□□ 0.37
CLN6-212ENST00000636020 MAP2K7O14733 419 aa17.36■□□□□ 0.37
CLN6-212ENST00000636020 ZRANB2O95218 330 aaKnown RBP eCLIP17.36■□□□□ 0.37
CLN6-212ENST00000636020 BMP10O95393 424 aa17.36■□□□□ 0.37
CLN6-212ENST00000636020 SERPINA7P05543 415 aa17.36■□□□□ 0.37
CLN6-212ENST00000636020 CHRM5P08912 532 aaPredicted RBP17.36■□□□□ 0.37
CLN6-212ENST00000636020 MYBL2P10244 700 aa17.36■□□□□ 0.37
CLN6-212ENST00000636020 CARSP49589 748 aaKnown RBP17.36■□□□□ 0.37
CLN6-212ENST00000636020 PRLHRP49683 370 aa17.36■□□□□ 0.37
CLN6-212ENST00000636020 LTBQ06643 244 aa17.36■□□□□ 0.37
CLN6-212ENST00000636020 KRTCAP3Q53RY4 240 aa17.36■□□□□ 0.37
CLN6-212ENST00000636020 NDUFAF7Q7L592 441 aa17.36■□□□□ 0.37
CLN6-212ENST00000636020 KCTD6Q8NC69 237 aa17.36■□□□□ 0.37
CLN6-212ENST00000636020 SUN3Q8TAQ9 357 aa17.36■□□□□ 0.37
CLN6-212ENST00000636020 ENOX1Q8TC92 643 aaKnown RBP17.36■□□□□ 0.37
CLN6-212ENST00000636020 TFGQ92734 400 aaPredicted RBP17.36■□□□□ 0.37
CLN6-212ENST00000636020 SDCCAG3Q96C92 435 aa17.36■□□□□ 0.37
CLN6-212ENST00000636020 GPR137Q96N19 417 aa17.36■□□□□ 0.37
CLN6-212ENST00000636020 ZNF830Q96NB3 372 aaPredicted RBP17.36■□□□□ 0.37
CLN6-212ENST00000636020 MDFIQ99750 246 aa17.36■□□□□ 0.37
CLN6-212ENST00000636020 COG4Q9H9E3 785 aa17.36■□□□□ 0.37
CLN6-212ENST00000636020 GLOD4Q9HC38 313 aa17.36■□□□□ 0.37
CLN6-212ENST00000636020 CCM2LQ9NUG4 571 aaPredicted RBP17.36■□□□□ 0.37
CLN6-212ENST00000636020 UBP1Q9NZI7 540 aa17.36■□□□□ 0.37
CLN6-212ENST00000636020 PKP3Q9Y446 797 aa17.36■□□□□ 0.37
CLN6-212ENST00000636020 NSD1Q96L73 2696 aaPredicted RBP17.35■□□□□ 0.37
CLN6-212ENST00000636020 CPAMD8Q8IZJ3 1885 aa17.35■□□□□ 0.37
CLN6-212ENST00000636020 CSPG4Q6UVK1 2322 aa17.35■□□□□ 0.37
CLN6-212ENST00000636020 NSG1A0A0A6YYJ2 146 aa17.35■□□□□ 0.37
CLN6-212ENST00000636020 OR5H15A6NDH6 313 aa17.35■□□□□ 0.37
CLN6-212ENST00000636020 COX6A1P12074 109 aa17.35■□□□□ 0.37
CLN6-212ENST00000636020 PDHA2P29803 388 aa17.35■□□□□ 0.37
CLN6-212ENST00000636020 NSG1P42857 185 aa17.35■□□□□ 0.37
CLN6-212ENST00000636020 OR1D4P47884 311 aa17.35■□□□□ 0.37
CLN6-212ENST00000636020 FANCCQ00597 558 aa17.35■□□□□ 0.37
CLN6-212ENST00000636020 UBXN1Q04323 297 aa17.35■□□□□ 0.37
CLN6-212ENST00000636020 KLC1Q07866 573 aa17.35■□□□□ 0.37
CLN6-212ENST00000636020 AP1B1Q10567 949 aa17.35■□□□□ 0.37
CLN6-212ENST00000636020 PDK2Q15119 407 aa17.35■□□□□ 0.37
CLN6-212ENST00000636020 HADHQ16836 314 aaKnown RBP17.35■□□□□ 0.37
CLN6-212ENST00000636020 ZNF658BQ4V348 819 aaPredicted RBP17.35■□□□□ 0.37
CLN6-212ENST00000636020 SIRPB2Q5JXA9 342 aa17.35■□□□□ 0.37
CLN6-212ENST00000636020 TMEM200AQ86VY9 491 aa17.35■□□□□ 0.37
CLN6-212ENST00000636020 MCATQ8IVS2 390 aaKnown RBP17.35■□□□□ 0.37
CLN6-212ENST00000636020 DMRTA2Q96SC8 542 aa17.35■□□□□ 0.37
CLN6-212ENST00000636020 ISCUQ9H1K1 167 aa17.35■□□□□ 0.37
CLN6-212ENST00000636020 HAUS4Q9H6D7 363 aa17.35■□□□□ 0.37
CLN6-212ENST00000636020 CUTCQ9NTM9 273 aa17.35■□□□□ 0.37
CLN6-212ENST00000636020 HACD3Q9P035 362 aa17.35■□□□□ 0.37
CLN6-212ENST00000636020 MYO6Q9UM54 1294 aa17.35■□□□□ 0.37
CLN6-212ENST00000636020 FOXO6A8MYZ6 492 aa17.34■□□□□ 0.37
CLN6-212ENST00000636020 E9PLN8 166 aa17.34■□□□□ 0.37
CLN6-212ENST00000636020 ADAM10O14672 748 aa17.34■□□□□ 0.37
CLN6-212ENST00000636020 WFS1O76024 890 aa17.34■□□□□ 0.37
CLN6-212ENST00000636020 SHMT2P34897 504 aa17.34■□□□□ 0.37
CLN6-212ENST00000636020 SSR1P43307 286 aaKnown RBP17.34■□□□□ 0.37
CLN6-212ENST00000636020 CHRNA4P43681 627 aa17.34■□□□□ 0.37
CLN6-212ENST00000636020 PTPRCAPQ14761 206 aa17.34■□□□□ 0.37
CLN6-212ENST00000636020 HIBCHQ6NVY1 386 aaPredicted RBP17.34■□□□□ 0.37
CLN6-212ENST00000636020 GLT6D1Q7Z4J2 308 aa17.34■□□□□ 0.37
CLN6-212ENST00000636020 DNAAF3Q8N9W5 541 aa17.34■□□□□ 0.37
CLN6-212ENST00000636020 STT3BQ8TCJ2 826 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms