RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 A0A1W2PQM1 296 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 FSD2A1L4K1 749 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 PGPEP1LA6NFU8 196 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 LIPT2A6NK58 231 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 PMS2P5A8MQ11 134 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 A8MV72 311 aaPredicted RBP1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 B4E171 279 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 ANKRD66B4E2M5 251 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 FAM90A26D6RGX4 464 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 CTDSP2O14595 271 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 MEIS2O14770 477 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 SYNGR3O43761 229 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 USO1O60763 962 aaKnown RBP1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 TMCC2O75069 709 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 RSL1D1O76021 490 aaKnown RBP1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 GH2P01242 217 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 ACTN1P12814 892 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 CSF2RAP15509 400 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 SAT1P21673 171 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 SP100P23497 879 aaPredicted RBP1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 MCCP23508 829 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 PSMA4P25789 261 aaKnown RBP1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 MARK3P27448 753 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 NMBRP28336 390 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 CHRNB4P30926 498 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 MAPK4P31152 587 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 AHRP35869 848 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 HADHAP40939 763 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 UBA7P41226 1012 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 APOBEC1P41238 236 aaKnown RBP1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 TSPAN7P41732 249 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 MMP14P50281 582 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 CTSCP53634 463 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 MFAP4P55083 255 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 GEMIN4P57678 1058 aaKnown RBP1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 TAS2R40P59535 323 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 MC1RQ01726 317 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 MBTD1Q05BQ5 628 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 CHAF1BQ13112 559 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 KCNC3Q14003 757 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 DLG2Q15700 870 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 DECR1Q16698 335 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 DUOXA1Q1HG43 343 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 KRTCAP3Q53RY4 240 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 ZC2HC1BQ5TFG8 222 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 ARHGEF16Q5VV41 709 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 SNX30Q5VWJ9 437 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 ALS2CLQ60I27 953 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 ADALQ6DHV7 355 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 KIAA0930Q6ICG6 404 aaPredicted RBP1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 SLC27A1Q6PCB7 646 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 ZNF790Q6PG37 636 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 PAPD4Q6PIY7 484 aaKnown RBP1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 BRAT1Q6PJG6 821 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 CEACAM20Q6UY09 585 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 PACS1Q6VY07 963 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 PIWIL4Q7Z3Z4 852 aaKnown RBP1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 TBC1D1Q86TI0 1168 aaPredicted RBP1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 NFE4Q86UQ8 179 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 P2RY8Q86VZ1 359 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 PTOV1Q86YD1 416 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 UNC5CLQ8IV45 518 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 CFAP206Q8IYR0 622 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 PM20D2Q8IYS1 436 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 RNF168Q8IYW5 571 aaPredicted RBP1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 SCYL3Q8IZE3 742 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 CDK20Q8IZL9 346 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 FBXO39Q8N4B4 442 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 WDTC1Q8N5D0 677 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 C1orf52Q8N6N3 182 aaKnown RBP1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 STPG4Q8N801 248 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 HJURPQ8NCD3 748 aaPredicted RBP1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 ADAD2Q8NCV1 583 aaKnown RBP1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 APPL2Q8NEU8 664 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 OR10V1Q8NGI7 309 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 SPATA22Q8NHS9 363 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 LNX1Q8TBB1 728 aaPredicted RBP1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 TBC1D16Q8TBP0 767 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 TM9SF4Q92544 642 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 SECISBP2LQ93073 1101 aaKnown RBP1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 JAKMIP2Q96AA8 810 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 MTERF3Q96E29 417 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 CALML4Q96GE6 196 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 ABHD8Q96I13 439 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 ST6GAL2Q96JF0 529 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 SEPT5Q99719 369 aaPredicted RBP1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 LITAFQ99732 161 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 FSD1Q9BTV5 496 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 HGH1Q9BTY7 390 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 FNDC11Q9BVV2 318 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 STRA6Q9BX79 667 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 ITPAQ9BY32 194 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 HRH4Q9H3N8 390 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 TFB2MQ9H5Q4 396 aaKnown RBP1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 EBF2Q9HAK2 575 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 OLFML3Q9NRN5 406 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 SETD4Q9NVD3 440 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 MIOSQ9NXC5 875 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 MTMR10Q9NXD2 777 aa1.04□□□□□ -2.24
SMARCB1-209ENST00000635578 ARHGEF38Q9NXL2 777 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms