RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 TAZQ16635 292 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 VWC2Q2TAL6 325 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 PARP10Q53GL7 1025 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 CCDC158Q5M9N0 1113 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 SHEQ5VZ18 495 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 FAM91A1Q658Y4 838 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 GBP6Q6ZN66 633 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 CREB3L2Q70SY1 520 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 MTSS1LQ765P7 747 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 BTN2A1Q7KYR7 527 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 DSG4Q86SJ6 1040 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 DZIP1Q86YF9 867 aaKnown RBP3.12□□□□□ -1.91
VPS8-228ENST00000628962 TIGD4Q8IY51 512 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 DSELQ8IZU8 1212 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 ZNF619Q8N2I2 560 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 SPATA6LQ8N4H0 392 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 NHLRC2Q8NBF2 726 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 PSMA8Q8TAA3 256 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 ADAMTS14Q8WXS8 1223 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 ROBO4Q8WZ75 1007 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 SPSB1Q96BD6 273 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 NODALQ96S42 347 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 MYCBPQ99417 103 aaPredicted RBP3.12□□□□□ -1.91
VPS8-228ENST00000628962 ABHD6Q9BV23 337 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 SLC5A7Q9GZV3 580 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 THAP9Q9H5L6 903 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 MAGIXQ9H6Y5 334 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 MKKSQ9NPJ1 570 aaPredicted RBP3.12□□□□□ -1.91
VPS8-228ENST00000628962 PDRG1Q9NUG6 133 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 ERAP1Q9NZ08 941 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 SEPT10Q9P0V9 454 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 SLC9A2Q9UBY0 812 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 LEF1Q9UJU2 399 aaPredicted RBP3.12□□□□□ -1.91
VPS8-228ENST00000628962 TTC7AQ9ULT0 858 aaPredicted RBP3.12□□□□□ -1.91
VPS8-228ENST00000628962 FZD10Q9ULW2 581 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 EHBP1L1Q8N3D4 1523 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 DHX57Q6P158 1386 aaKnown RBP3.12□□□□□ -1.91
VPS8-228ENST00000628962 CCNB3Q8WWL7 1395 aa3.12□□□□□ -1.91
VPS8-228ENST00000628962 USP32Q8NFA0 1604 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 PLSCR5A0PG75 271 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 TMEM8BA6NDV4 472 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 CCDC69A6NI79 296 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 STMND1H3BQB6 276 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 SLC33A1O00400 549 aaPredicted RBP3.11□□□□□ -1.91
VPS8-228ENST00000628962 CPLX1O14810 134 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 IFIT3O14879 490 aaKnown RBP3.11□□□□□ -1.91
VPS8-228ENST00000628962 PGRMC2O15173 223 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 TSPAN1O60635 241 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 EGFP01133 1207 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 ZFYP08048 801 aaPredicted RBP3.11□□□□□ -1.91
VPS8-228ENST00000628962 FAM58BPP0C7Q3 252 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 TSPY4P0CV99 314 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 TSPY10P0CW01 314 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 HSPA8P11142 646 aaKnown RBP3.11□□□□□ -1.91
VPS8-228ENST00000628962 G6PDP11413 515 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 DDX5P17844 614 aaKnown RBP3.11□□□□□ -1.91
VPS8-228ENST00000628962 ADRA2CP18825 462 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 MAOAP21397 527 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 SOAT1P35610 550 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 PIGAP37287 484 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 EIF2S3P41091 472 aaKnown RBP3.11□□□□□ -1.91
VPS8-228ENST00000628962 CRKLP46109 303 aaKnown RBP3.11□□□□□ -1.91
VPS8-228ENST00000628962 PPP3CCP48454 512 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 NT5C2P49902 561 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 STX1BP61266 288 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 ARF5P84085 180 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 DSC1Q08554 894 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 SPOCK1Q08629 439 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 GRIK2Q13002 908 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 CBX3Q13185 183 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 MAD2L1Q13257 205 aaPredicted RBP3.11□□□□□ -1.91
VPS8-228ENST00000628962 ITGA7Q13683 1181 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 MEP1AQ16819 746 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 EIF2S3LQ2VIR3 472 aaKnown RBP3.11□□□□□ -1.91
VPS8-228ENST00000628962 TWISTNBQ3B726 338 aaPredicted RBP3.11□□□□□ -1.91
VPS8-228ENST00000628962 ATP13A5Q4VNC0 1218 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 C6orf136Q5SQH8 315 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 ZDHHC20Q5W0Z9 365 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 ANKRD54Q6NXT1 300 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 TMEM71Q6P5X7 295 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 PAPD4Q6PIY7 484 aaKnown RBP3.11□□□□□ -1.91
VPS8-228ENST00000628962 SLC16A12Q6ZSM3 486 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 NUP54Q7Z3B4 507 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 PATL1Q86TB9 770 aaKnown RBP3.11□□□□□ -1.91
VPS8-228ENST00000628962 ZNF595Q8IYB9 648 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 MAML2Q8IZL2 1156 aaPredicted RBP3.11□□□□□ -1.91
VPS8-228ENST00000628962 RBFAQ8N0V3 343 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 CLIP4Q8N3C7 705 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 RFLNBQ8N5W9 214 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 EXD1Q8NHP7 514 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 SPATA20Q8TB22 786 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 ARRDC2Q8TBH0 407 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 GRAPLQ8TC17 118 aaPredicted RBP3.11□□□□□ -1.91
VPS8-228ENST00000628962 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.11□□□□□ -1.91
VPS8-228ENST00000628962 SLC35F5Q8WV83 523 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 EXT2Q93063 718 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 TEKT1Q969V4 418 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 NEK1Q96PY6 1258 aa3.11□□□□□ -1.91
VPS8-228ENST00000628962 GFM1Q96RP9 751 aaKnown RBP3.11□□□□□ -1.91
VPS8-228ENST00000628962 TSPAN18Q96SJ8 248 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms