RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 PKLRP30613 574 aa13.57□□□□□ -0.24
SNRPA1-216ENST00000626000 PHBP35232 272 aa13.57□□□□□ -0.24
SNRPA1-216ENST00000626000 MAGEA4P43358 317 aa13.57□□□□□ -0.24
SNRPA1-216ENST00000626000 TUBB4BP68371 445 aa13.57□□□□□ -0.24
SNRPA1-216ENST00000626000 MRPS25P82663 173 aaKnown RBP13.57□□□□□ -0.24
SNRPA1-216ENST00000626000 PDAP1Q13442 181 aaKnown RBP13.57□□□□□ -0.24
SNRPA1-216ENST00000626000 MAP7Q14244 749 aa13.57□□□□□ -0.24
SNRPA1-216ENST00000626000 SLC5A12Q1EHB4 618 aa13.57□□□□□ -0.24
SNRPA1-216ENST00000626000 KLHL38Q2WGJ6 581 aa13.57□□□□□ -0.24
SNRPA1-216ENST00000626000 HP1BP3Q5SSJ5 553 aaPredicted RBP13.57□□□□□ -0.24
SNRPA1-216ENST00000626000 ANKS6Q68DC2 871 aa13.57□□□□□ -0.24
SNRPA1-216ENST00000626000 CNSTQ6PJW8 725 aa13.57□□□□□ -0.24
SNRPA1-216ENST00000626000 SPESP1Q6UW49 350 aa13.57□□□□□ -0.24
SNRPA1-216ENST00000626000 NAPRTQ6XQN6 538 aa13.57□□□□□ -0.24
SNRPA1-216ENST00000626000 C3orf62Q6ZUJ4 267 aa13.57□□□□□ -0.24
SNRPA1-216ENST00000626000 CCDC25Q86WR0 208 aa13.57□□□□□ -0.24
SNRPA1-216ENST00000626000 RELL1Q8IUW5 271 aa13.57□□□□□ -0.24
SNRPA1-216ENST00000626000 VRK3Q8IV63 474 aa13.57□□□□□ -0.24
SNRPA1-216ENST00000626000 D2HGDHQ8N465 521 aa13.57□□□□□ -0.24
SNRPA1-216ENST00000626000 CD200R1Q8TD46 325 aa13.57□□□□□ -0.24
SNRPA1-216ENST00000626000 PWWP2AQ96N64 755 aa13.57□□□□□ -0.24
SNRPA1-216ENST00000626000 GPR21Q99679 349 aa13.57□□□□□ -0.24
SNRPA1-216ENST00000626000 CPNE1Q99829 537 aa13.57□□□□□ -0.24
SNRPA1-216ENST00000626000 POPDC3Q9HBV1 291 aa13.57□□□□□ -0.24
SNRPA1-216ENST00000626000 SOHLH2Q9NX45 425 aa13.57□□□□□ -0.24
SNRPA1-216ENST00000626000 ACTR10Q9NZ32 417 aa13.57□□□□□ -0.24
SNRPA1-216ENST00000626000 FREM2Q5SZK8 3169 aa13.57□□□□□ -0.24
SNRPA1-216ENST00000626000 HAX1O00165 279 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 BTN3A1O00481 513 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 SLC16A5O15375 505 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 PRAMEF10O60809 474 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 MT-ND3P03897 115 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 FGF5P12034 268 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 ABCG1P45844 678 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 SEPHS1P49903 392 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 KPNA2P52292 529 aaKnown RBP13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 SLC12A2P55011 1212 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 IL2P60568 153 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 SLC7A5Q01650 507 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 FOXM1Q08050 763 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 FASTKD3Q14CZ7 662 aaKnown RBP13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 ACSBG2Q5FVE4 666 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 ZNF789Q5FWF6 425 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 ZNF549Q6P9A3 640 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 TRMT10BQ6PF06 316 aaKnown RBP13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 ZDHHC24Q6UX98 284 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 STRA8Q7Z7C7 330 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 PPP1R3BQ86XI6 285 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 IFT20Q8IY31 132 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 ADGRF3Q8IZF5 1079 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 UNC5BQ8IZJ1 945 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 MYO1HQ8N1T3 1032 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 GPATCH11Q8N954 259 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 ANKRD7Q92527 254 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 TSPAN17Q96FV3 270 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 TCTN2Q96GX1 697 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 FMO2Q99518 471 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 MAP3K3Q99759 626 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 WDR83Q9BRX9 315 aaKnown RBP13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 EFHD1Q9BUP0 239 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 FAM117AQ9C073 453 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 TWSG1Q9GZX9 223 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 RHOJQ9H4E5 214 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 PLAC1Q9HBJ0 212 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 ZDHHC18Q9NUE0 388 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 OCIAD1Q9NX40 245 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 UTP6Q9NYH9 597 aaKnown RBP13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 RARRES3Q9UL19 164 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 VWA7Q9Y334 891 aa13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 URB1O60287 2271 aaKnown RBP13.56□□□□□ -0.24
SNRPA1-216ENST00000626000 IGHV5-51A0A0C4DH38 117 aa13.55□□□□□ -0.24
SNRPA1-216ENST00000626000 A0A0J9YY10 115 aa13.55□□□□□ -0.24
SNRPA1-216ENST00000626000 TCRBV9S1A1TA0A576 114 aa13.55□□□□□ -0.24
SNRPA1-216ENST00000626000 C9orf172C9J069 976 aa13.55□□□□□ -0.24
SNRPA1-216ENST00000626000 MYO1CO00159 1063 aa13.55□□□□□ -0.24
SNRPA1-216ENST00000626000 BTN3A3O00478 584 aa13.55□□□□□ -0.24
SNRPA1-216ENST00000626000 TLX3O43711 291 aaPredicted RBP13.55□□□□□ -0.24
SNRPA1-216ENST00000626000 CYP2A7P20853 494 aa13.55□□□□□ -0.24
SNRPA1-216ENST00000626000 GP5P40197 560 aa13.55□□□□□ -0.24
SNRPA1-216ENST00000626000 ETV5P41161 510 aa13.55□□□□□ -0.24
SNRPA1-216ENST00000626000 TUBB3Q13509 450 aa13.55□□□□□ -0.24
SNRPA1-216ENST00000626000 CCDC91Q7Z6B0 441 aa13.55□□□□□ -0.24
SNRPA1-216ENST00000626000 ZC3HC1Q86WB0 502 aaKnown RBP13.55□□□□□ -0.24
SNRPA1-216ENST00000626000 OR9A1PQ8NGU1 263 aa13.55□□□□□ -0.24
SNRPA1-216ENST00000626000 MCOLN3Q8TDD5 553 aa13.55□□□□□ -0.24
SNRPA1-216ENST00000626000 JPH3Q8WXH2 748 aaPredicted RBP13.55□□□□□ -0.24
SNRPA1-216ENST00000626000 ASB11Q8WXH4 323 aa13.55□□□□□ -0.24
SNRPA1-216ENST00000626000 DCBLD2Q96PD2 775 aa13.55□□□□□ -0.24
SNRPA1-216ENST00000626000 OR6C1Q96RD1 312 aa13.55□□□□□ -0.24
SNRPA1-216ENST00000626000 TRIM54Q9BYV2 358 aa13.55□□□□□ -0.24
SNRPA1-216ENST00000626000 FGF21Q9NSA1 209 aa13.55□□□□□ -0.24
SNRPA1-216ENST00000626000 MED16Q9Y2X0 877 aa13.55□□□□□ -0.24
SNRPA1-216ENST00000626000 TMEM184BQ9Y519 407 aaPredicted RBP13.55□□□□□ -0.24
SNRPA1-216ENST00000626000 USP24Q9UPU5 2620 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 FAM159BA6NKW6 160 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 ISM1B1AKI9 464 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 GFYI3L273 518 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 TAF4O00268 1085 aa13.54□□□□□ -0.24
SNRPA1-216ENST00000626000 KIF1CO43896 1103 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms