RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 PYCR3Q53H96 274 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 CYBRD1Q53TN4 286 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 ASTLQ6HA08 431 aaPredicted RBP8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 GDPD4Q6W3E5 623 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 DET1Q7L5Y6 550 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 TMEM25Q86YD3 366 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 LEMD2Q8NC56 503 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 OR10A6Q8NH74 314 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 DNAJB8Q8NHS0 232 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 SKA2Q8WVK7 121 aaPredicted RBP8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 SELENOMQ8WWX9 145 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 ASB11Q8WXH4 323 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 FBXL20Q96IG2 436 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 OR52E6Q96RD3 313 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 UGT2B28Q9BY64 529 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 ACPTQ9BZG2 426 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 PKD2L2Q9NZM6 624 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 SLCO3A1Q9UIG8 710 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 TMPRSS11EQ9UL52 423 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 SNX6Q9UNH7 406 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 CCL26Q9Y258 94 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 PTPRSQ13332 1948 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 TRIM64A6NGJ6 449 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 TRIM64CA6NLI5 447 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 NEDD8-MDP1E9PL57 170 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 SLC16A5O15375 505 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 CCL16O15467 120 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 SEC24DO94855 1032 aaPredicted RBP8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 PRSS23O95084 383 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 ADH1AP07327 375 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 PABPC1P11940 636 aaKnown RBP8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 ATP1B2P14415 290 aaPredicted RBP8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 CSF2RAP15509 400 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 SLC6A12P48065 614 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 CDH15P55291 814 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 RPS14P62263 151 aaKnown RBP8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 SP140Q13342 867 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 RUNDC3AQ59EK9 446 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 LRRC73Q5JTD7 316 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 PLEKHS1Q5SXH7 462 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 ABRAXAS1Q6UWZ7 409 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 Q6ZVU0 165 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 PATL1Q86TB9 770 aaKnown RBP8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 MSRB3Q8IXL7 192 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 FAM9CQ8IZT9 166 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 CHST14Q8NCH0 376 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 ZNF548Q8NEK5 533 aaPredicted RBP8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 FIG4Q92562 907 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 ELOVL6Q9H5J4 265 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 NTN4Q9HB63 628 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 SAGE1Q9NXZ1 904 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 SLC25A37Q9NYZ2 338 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 RSL24D1Q9UHA3 163 aaKnown RBP8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 CD84Q9UIB8 345 aa8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 MBD1Q9UIS9 605 aaPredicted RBP8.12□□□□□ -1.11
SND1-IT1-201ENST00000623342 KCNE1BA0A087WTH5 132 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 ELOVL7A1L3X0 281 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 WASH3PC4AMC7 463 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 H0YAE9 185 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 UPK1AO00322 258 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 KPNA5O15131 536 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 ERN1O75460 977 aaKnown RBP8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 SCELO95171 688 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 SNAP29O95721 258 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 CYP2A6P11509 494 aaPredicted RBP8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 PRPS2P11908 318 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 ZNF30P17039 623 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 CYP2A7P20853 494 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 PRPH2P23942 346 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 RPL10P27635 214 aaKnown RBP8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 CCR2P41597 374 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 CLDN8P56748 225 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 ADARB1P78563 741 aaKnown RBP8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 BOP1Q14137 746 aaKnown RBP8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 ZXDCQ2QGD7 858 aaPredicted RBP8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 TMEM214Q6NUQ4 689 aaKnown RBP8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 BRAT1Q6PJG6 821 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 TBPL2Q6SJ96 375 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 VRK3Q8IV63 474 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 ZNF557Q8N988 423 aaPredicted RBP8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 L3MBTL4Q8NA19 623 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 OR52E4Q8NGH9 312 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 CLHC1Q8NHS4 586 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 ADAMTS16Q8TE57 1224 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 SLC22A17Q8WUG5 538 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 TMIGD2Q96BF3 282 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 BBS2Q9BXC9 721 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 OSBPL6Q9BZF3 934 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 IKZF5Q9H5V7 419 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 HCFC1R1Q9NWW0 138 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 ADGRE2Q9UHX3 823 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 INVSQ9Y283 1065 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 HELZP42694 1942 aaKnown RBP8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 TRBV5-3A0A0A0MS03 114 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 CFAP99D6REC4 459 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 GFYI3L273 518 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 CLIC3O95833 236 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 ALBP02768 609 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 PCSK2P16519 638 aa8.11□□□□□ -1.11
SND1-IT1-201ENST00000623342 DDX6P26196 483 aaKnown RBP eCLIP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms