RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 MAGEA2P43356 314 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 CLCNKBP51801 687 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 MLLT6P55198 1093 aaPredicted RBP13.81□□□□□ -0.2
LDB3-209ENST00000623056 PTPRNQ16849 979 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 C18orf21Q32NC0 220 aaPredicted RBP13.81□□□□□ -0.2
LDB3-209ENST00000623056 SNX20Q7Z614 316 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 TSPYL5Q86VY4 417 aaPredicted RBP13.81□□□□□ -0.2
LDB3-209ENST00000623056 CALHM3Q86XJ0 350 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 AMER2Q8N7J2 671 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 ZNF784Q8NCA9 323 aaPredicted RBP13.81□□□□□ -0.2
LDB3-209ENST00000623056 OR7G1Q8NGA0 311 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 OR4F6Q8NGB9 312 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 EEF1AKMT1Q8WVE0 214 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 LINGO1Q96FE5 620 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 MROH8Q9H579 483 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 C1orf109Q9NX04 203 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 ABCG2Q9UNQ0 655 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 KCNH4Q9UQ05 1017 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 PLXNB2O15031 1838 aa13.81□□□□□ -0.2
LDB3-209ENST00000623056 GLTPD2A6NH11 291 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 RRN3P2A6NIE6 340 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 MEIS3P2A8K0S8 358 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 MYO1GB0I1T2 1018 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 MFN2O95140 757 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 PGRP06401 933 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 SERPINF2P08697 491 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 MZF1P28698 734 aaPredicted RBP13.8□□□□□ -0.2
LDB3-209ENST00000623056 PCSK1P29120 753 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 CTSKP43235 329 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 GZMMP51124 257 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 TMC5Q6UXY8 1006 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 ASCC1Q8N9N2 400 aaKnown RBP13.8□□□□□ -0.2
LDB3-209ENST00000623056 DNAJB3Q8WWF6 145 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 SNX18Q96RF0 628 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 RTP3Q9BQQ7 232 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 CCDC177Q9NQR7 707 aaPredicted RBP13.8□□□□□ -0.2
LDB3-209ENST00000623056 NPAP1Q9NZP6 1156 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 TMA7Q9Y2S6 64 aaKnown RBP13.8□□□□□ -0.2
LDB3-209ENST00000623056 PCDHGB6Q9Y5F9 930 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 TRBV5-3A0A0A0MS03 114 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 PDZK1P1A8MUH7 402 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 OR7A17O14581 309 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 CXCL11O14625 94 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 NIPSNAP2O75323 286 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 SEC22BO75396 215 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 APOA1P02647 267 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 CHRNB1P11230 501 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 POLR2EP19388 210 aaKnown RBP13.8□□□□□ -0.2
LDB3-209ENST00000623056 ARHGDIAP52565 204 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 OR2B6P58173 313 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 DEFA1P59665 94 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 DEFA3P59666 94 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 ALFQ53S48 1182 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 FAM209AQ5JX71 171 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 ATG9BQ674R7 924 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 OR2T5Q6IEZ7 315 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 ZNF544Q6NX49 715 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 GOLGA7Q7Z5G4 137 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 PLPP6Q8IY26 295 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 KRTCAP2Q8N6L1 136 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 OR2T29Q8NH02 315 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 APH1BQ8WW43 257 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 FAM120BQ96EK7 910 aaKnown RBP13.8□□□□□ -0.2
LDB3-209ENST00000623056 SLC10A4Q96EP9 437 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 PPP3R2Q96LZ3 170 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 DPY30Q9C005 99 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 REXO4Q9GZR2 422 aaKnown RBP13.8□□□□□ -0.2
LDB3-209ENST00000623056 DDX28Q9NUL7 540 aaKnown RBP13.8□□□□□ -0.2
LDB3-209ENST00000623056 TMLHEQ9NVH6 421 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 TRMT6Q9UJA5 497 aaKnown RBP13.8□□□□□ -0.2
LDB3-209ENST00000623056 CCL27Q9Y4X3 112 aa13.8□□□□□ -0.2
LDB3-209ENST00000623056 ZW10O43264 779 aa13.79□□□□□ -0.2
LDB3-209ENST00000623056 VPS26AO75436 327 aa13.79□□□□□ -0.2
LDB3-209ENST00000623056 MED26O95402 600 aa13.79□□□□□ -0.2
LDB3-209ENST00000623056 HOXB6P17509 224 aaKnown RBP13.79□□□□□ -0.2
LDB3-209ENST00000623056 CDKN1CP49918 316 aaPredicted RBP13.79□□□□□ -0.2
LDB3-209ENST00000623056 CREMQ03060 361 aa13.79□□□□□ -0.2
LDB3-209ENST00000623056 TIGD6Q17RP2 521 aa13.79□□□□□ -0.2
LDB3-209ENST00000623056 PROX2Q3B8N5 592 aa13.79□□□□□ -0.2
LDB3-209ENST00000623056 KIAA1614Q5VZ46 1190 aa13.79□□□□□ -0.2
LDB3-209ENST00000623056 PPP2R2DQ66LE6 453 aa13.79□□□□□ -0.2
LDB3-209ENST00000623056 FCGR1BQ92637 280 aa13.79□□□□□ -0.2
LDB3-209ENST00000623056 DNASE1L2Q92874 299 aa13.79□□□□□ -0.2
LDB3-209ENST00000623056 TBC1D20Q96BZ9 403 aa13.79□□□□□ -0.2
LDB3-209ENST00000623056 TM9SF3Q9HD45 589 aa13.79□□□□□ -0.2
LDB3-209ENST00000623056 EHD3Q9NZN3 535 aa13.79□□□□□ -0.2
LDB3-209ENST00000623056 CCDC59Q9P031 241 aaKnown RBP13.79□□□□□ -0.2
LDB3-209ENST00000623056 AP3M1Q9Y2T2 418 aa13.79□□□□□ -0.2
LDB3-209ENST00000623056 SMIM35A0A1B0GVV1 85 aa13.79□□□□□ -0.2
LDB3-209ENST00000623056 MUSKO15146 869 aa13.79□□□□□ -0.2
LDB3-209ENST00000623056 PCDHGA12O60330 932 aa13.79□□□□□ -0.2
LDB3-209ENST00000623056 DIRAS1O95057 198 aa13.79□□□□□ -0.2
LDB3-209ENST00000623056 ZNF682O95780 498 aa13.79□□□□□ -0.2
LDB3-209ENST00000623056 IL6P05231 212 aa13.79□□□□□ -0.2
LDB3-209ENST00000623056 MYCLP1P12525 358 aaPredicted RBP13.79□□□□□ -0.2
LDB3-209ENST00000623056 RHOQP17081 205 aa13.79□□□□□ -0.2
LDB3-209ENST00000623056 PAX3P23760 479 aa13.79□□□□□ -0.2
LDB3-209ENST00000623056 GRK5P34947 590 aa13.79□□□□□ -0.2
LDB3-209ENST00000623056 HTR3AP46098 478 aa13.79□□□□□ -0.2
LDB3-209ENST00000623056 AFF1P51825 1210 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms