RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 RGS4P49798 205 aa17.71■□□□□ 0.43
LITAF-220ENST00000620789 SEPHS1P49903 392 aa17.71■□□□□ 0.43
LITAF-220ENST00000620789 PDAP1Q13442 181 aaKnown RBP17.71■□□□□ 0.43
LITAF-220ENST00000620789 KBTBD12Q3ZCT8 623 aa17.71■□□□□ 0.43
LITAF-220ENST00000620789 CCSMST1Q4G0I0 132 aa17.71■□□□□ 0.43
LITAF-220ENST00000620789 PAQR3Q6TCH7 311 aa17.71■□□□□ 0.43
LITAF-220ENST00000620789 CYHR1Q6ZMK1 362 aa17.71■□□□□ 0.43
LITAF-220ENST00000620789 PIWIL4Q7Z3Z4 852 aaKnown RBP17.71■□□□□ 0.43
LITAF-220ENST00000620789 CTAGE3PQ8IX95 158 aa17.71■□□□□ 0.43
LITAF-220ENST00000620789 VPS39Q96JC1 886 aa17.71■□□□□ 0.43
LITAF-220ENST00000620789 ELMO2Q96JJ3 720 aa17.71■□□□□ 0.43
LITAF-220ENST00000620789 OLFM1Q99784 485 aa17.71■□□□□ 0.43
LITAF-220ENST00000620789 CPNE1Q99829 537 aa17.71■□□□□ 0.43
LITAF-220ENST00000620789 RAB11FIP5Q9BXF6 653 aa17.71■□□□□ 0.43
LITAF-220ENST00000620789 TWSG1Q9GZX9 223 aa17.71■□□□□ 0.43
LITAF-220ENST00000620789 SIDT1Q9NXL6 827 aaKnown RBP17.71■□□□□ 0.43
LITAF-220ENST00000620789 ACTR10Q9NZ32 417 aa17.71■□□□□ 0.43
LITAF-220ENST00000620789 NINJ2Q9NZG7 142 aa17.71■□□□□ 0.43
LITAF-220ENST00000620789 SLC39A10Q9ULF5 831 aa17.71■□□□□ 0.43
LITAF-220ENST00000620789 NFU1Q9UMS0 254 aa17.71■□□□□ 0.43
LITAF-220ENST00000620789 MAP1BP46821 2468 aaKnown RBP17.7■□□□□ 0.42
LITAF-220ENST00000620789 ARHGEF33A8MVX0 844 aa17.7■□□□□ 0.42
LITAF-220ENST00000620789 RASGRF2O14827 1237 aa17.7■□□□□ 0.42
LITAF-220ENST00000620789 CATP04040 527 aaKnown RBP17.7■□□□□ 0.42
LITAF-220ENST00000620789 NELFEP18615 380 aaKnown RBP17.7■□□□□ 0.42
LITAF-220ENST00000620789 PRDX3P30048 256 aaKnown RBP17.7■□□□□ 0.42
LITAF-220ENST00000620789 MC2RQ01718 297 aa17.7■□□□□ 0.42
LITAF-220ENST00000620789 NAB1Q13506 487 aa17.7■□□□□ 0.42
LITAF-220ENST00000620789 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.7■□□□□ 0.42
LITAF-220ENST00000620789 KMT5CQ86Y97 462 aa17.7■□□□□ 0.42
LITAF-220ENST00000620789 RAB42Q8N4Z0 105 aa17.7■□□□□ 0.42
LITAF-220ENST00000620789 LINC01555Q8NAE3 123 aa17.7■□□□□ 0.42
LITAF-220ENST00000620789 EEF1AKMT1Q8WVE0 214 aa17.7■□□□□ 0.42
LITAF-220ENST00000620789 ASB11Q8WXH4 323 aa17.7■□□□□ 0.42
LITAF-220ENST00000620789 FGF11Q92914 225 aa17.7■□□□□ 0.42
LITAF-220ENST00000620789 USP7Q93009 1102 aa17.7■□□□□ 0.42
LITAF-220ENST00000620789 SLC41A2Q96JW4 573 aa17.7■□□□□ 0.42
LITAF-220ENST00000620789 PPM1MQ96MI6 270 aa17.7■□□□□ 0.42
LITAF-220ENST00000620789 IL17FQ96PD4 163 aa17.7■□□□□ 0.42
LITAF-220ENST00000620789 TAAR9Q96RI9 348 aa17.7■□□□□ 0.42
LITAF-220ENST00000620789 B3GNT4Q9C0J1 378 aa17.7■□□□□ 0.42
LITAF-220ENST00000620789 CDC42EP4Q9H3Q1 356 aaKnown RBP17.7■□□□□ 0.42
LITAF-220ENST00000620789 C1GALT1Q9NS00 363 aa17.7■□□□□ 0.42
LITAF-220ENST00000620789 SPHK1Q9NYA1 384 aa17.7■□□□□ 0.42
LITAF-220ENST00000620789 ADAMTS20P59510 1910 aa17.7■□□□□ 0.42
LITAF-220ENST00000620789 APC2O95996 2303 aa17.69■□□□□ 0.42
LITAF-220ENST00000620789 KRT87PA6NCN2 255 aa17.69■□□□□ 0.42
LITAF-220ENST00000620789 C9orf172C9J069 976 aa17.69■□□□□ 0.42
LITAF-220ENST00000620789 GFYI3L273 518 aa17.69■□□□□ 0.42
LITAF-220ENST00000620789 TAF4O00268 1085 aa17.69■□□□□ 0.42
LITAF-220ENST00000620789 NVLO15381 856 aaKnown RBP17.69■□□□□ 0.42
LITAF-220ENST00000620789 TLX3O43711 291 aaPredicted RBP17.69■□□□□ 0.42
LITAF-220ENST00000620789 UGT2B7P16662 529 aa17.69■□□□□ 0.42
LITAF-220ENST00000620789 SAT1P21673 171 aa17.69■□□□□ 0.42
LITAF-220ENST00000620789 CDH3P22223 829 aa17.69■□□□□ 0.42
LITAF-220ENST00000620789 SLC5A2P31639 672 aa17.69■□□□□ 0.42
LITAF-220ENST00000620789 PHBP35232 272 aa17.69■□□□□ 0.42
LITAF-220ENST00000620789 GP5P40197 560 aa17.69■□□□□ 0.42
LITAF-220ENST00000620789 RAB15P59190 212 aa17.69■□□□□ 0.42
LITAF-220ENST00000620789 KIR2DS3Q14952 304 aa17.69■□□□□ 0.42
LITAF-220ENST00000620789 TEX35Q5T0J7 233 aa17.69■□□□□ 0.42
LITAF-220ENST00000620789 TMEM164Q5U3C3 297 aa17.69■□□□□ 0.42
LITAF-220ENST00000620789 SPESP1Q6UW49 350 aa17.69■□□□□ 0.42
LITAF-220ENST00000620789 RASGRP3Q8IV61 690 aa17.69■□□□□ 0.42
LITAF-220ENST00000620789 PPM1NQ8N819 430 aa17.69■□□□□ 0.42
LITAF-220ENST00000620789 FBXO15Q8NCQ5 510 aaPredicted RBP17.69■□□□□ 0.42
LITAF-220ENST00000620789 OR2L8Q8NGY9 312 aa17.69■□□□□ 0.42
LITAF-220ENST00000620789 SNIP1Q8TAD8 396 aaKnown RBP17.69■□□□□ 0.42
LITAF-220ENST00000620789 LINGO1Q96FE5 620 aa17.69■□□□□ 0.42
LITAF-220ENST00000620789 RBBP8Q99708 897 aa17.69■□□□□ 0.42
LITAF-220ENST00000620789 PITPNM3Q9BZ71 974 aa17.69■□□□□ 0.42
LITAF-220ENST00000620789 FBXO8Q9NRD0 319 aa17.69■□□□□ 0.42
LITAF-220ENST00000620789 SLC39A1Q9NY26 324 aa17.69■□□□□ 0.42
LITAF-220ENST00000620789 SPATA7Q9P0W8 599 aa17.69■□□□□ 0.42
LITAF-220ENST00000620789 PCDHGA3Q9Y5H0 932 aa17.69■□□□□ 0.42
LITAF-220ENST00000620789 MYO1CO00159 1063 aa17.68■□□□□ 0.42
LITAF-220ENST00000620789 PRAMEF10O60809 474 aa17.68■□□□□ 0.42
LITAF-220ENST00000620789 ZBTB11O95625 1053 aaPredicted RBP17.68■□□□□ 0.42
LITAF-220ENST00000620789 TSPAN12O95859 305 aa17.68■□□□□ 0.42
LITAF-220ENST00000620789 PEBP1P30086 187 aaKnown RBP17.68■□□□□ 0.42
LITAF-220ENST00000620789 ARL4DP49703 201 aa17.68■□□□□ 0.42
LITAF-220ENST00000620789 PGGT1BP53609 377 aa17.68■□□□□ 0.42
LITAF-220ENST00000620789 PCBP4P57723 403 aaKnown RBP17.68■□□□□ 0.42
LITAF-220ENST00000620789 TAS2R39P59534 338 aa17.68■□□□□ 0.42
LITAF-220ENST00000620789 IL2P60568 153 aa17.68■□□□□ 0.42
LITAF-220ENST00000620789 SH3BP2P78314 561 aa17.68■□□□□ 0.42
LITAF-220ENST00000620789 EFTUD2Q15029 972 aaKnown RBP eCLIP17.68■□□□□ 0.42
LITAF-220ENST00000620789 UBAP2Q5T6F2 1119 aaKnown RBP17.68■□□□□ 0.42
LITAF-220ENST00000620789 GRTP1Q5TC63 336 aa17.68■□□□□ 0.42
LITAF-220ENST00000620789 FBXO38Q6PIJ6 1188 aa17.68■□□□□ 0.42
LITAF-220ENST00000620789 MYO1HQ8N1T3 1032 aa17.68■□□□□ 0.42
LITAF-220ENST00000620789 OR9A1PQ8NGU1 263 aa17.68■□□□□ 0.42
LITAF-220ENST00000620789 FLVCR1-AS1Q8TAF5 88 aa17.68■□□□□ 0.42
LITAF-220ENST00000620789 HMGCLL1Q8TB92 370 aa17.68■□□□□ 0.42
LITAF-220ENST00000620789 DENND1AQ8TEH3 1009 aa17.68■□□□□ 0.42
LITAF-220ENST00000620789 PMEPA1Q969W9 287 aa17.68■□□□□ 0.42
LITAF-220ENST00000620789 OR2A14Q96R47 310 aa17.68■□□□□ 0.42
LITAF-220ENST00000620789 DDA1Q9BW61 102 aa17.68■□□□□ 0.42
LITAF-220ENST00000620789 ASPSCR1Q9BZE9 553 aa17.68■□□□□ 0.42
LITAF-220ENST00000620789 ZMIZ1Q9ULJ6 1067 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms