RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 P2RY12Q9H244 342 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 ACOT13Q9NPJ3 140 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 OSGIN1Q9UJX0 560 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 DHRS7Q9Y394 339 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 ARIH1Q9Y4X5 557 aaPredicted RBP19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 COMMD10Q9Y6G5 202 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 HSPE1-MOB4S4R3N1 261 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 S100BP04271 92 aaPredicted RBP19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 CD52P31358 61 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 TGFBR1P36897 503 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 EIF2DP41214 584 aaKnown RBP19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 PTGER3P43115 390 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 FCGRTP55899 365 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 PHC1P78364 1004 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 MGAT3Q09327 533 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 DEPDC1Q5TB30 811 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 GDF6Q6KF10 455 aaPredicted RBP19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 PAGE2Q7Z2X7 111 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 ZDHHC21Q8IVQ6 265 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 TTC9BQ8N6N2 239 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 B3GALT6Q96L58 329 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 TNKS2Q9H2K2 1166 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 ZNF408Q9H9D4 720 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 SCN3BQ9NY72 215 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 IL37Q9NZH6 218 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 UBA2Q9UBT2 640 aaPredicted RBP19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 ERVW-1Q9UQF0 538 aa19.15■□□□□ 0.66
PDLIM3-212ENST00000620787 A0A0U1RQS6 177 aa19.14■□□□□ 0.66
PDLIM3-212ENST00000620787 B4GALT3O60512 393 aa19.14■□□□□ 0.66
PDLIM3-212ENST00000620787 TGFBR2P37173 567 aa19.14■□□□□ 0.66
PDLIM3-212ENST00000620787 PPP5CP53041 499 aa19.14■□□□□ 0.66
PDLIM3-212ENST00000620787 SMN1Q16637 294 aaKnown RBP19.14■□□□□ 0.66
PDLIM3-212ENST00000620787 ARMC8Q8IUR7 673 aa19.14■□□□□ 0.66
PDLIM3-212ENST00000620787 EFHBQ8N7U6 833 aa19.14■□□□□ 0.66
PDLIM3-212ENST00000620787 ZNF513Q8N8E2 541 aaPredicted RBP19.14■□□□□ 0.66
PDLIM3-212ENST00000620787 FBXO32Q969P5 355 aa19.14■□□□□ 0.66
PDLIM3-212ENST00000620787 TBC1D20Q96BZ9 403 aa19.14■□□□□ 0.66
PDLIM3-212ENST00000620787 LGALS12Q96DT0 336 aa19.14■□□□□ 0.66
PDLIM3-212ENST00000620787 THG1LQ9NWX6 298 aaKnown RBP19.14■□□□□ 0.66
PDLIM3-212ENST00000620787 ASIC5Q9NY37 505 aa19.14■□□□□ 0.66
PDLIM3-212ENST00000620787 PADI3Q9ULW8 664 aa19.14■□□□□ 0.66
PDLIM3-212ENST00000620787 SLC28A1O00337 649 aa19.14■□□□□ 0.65
PDLIM3-212ENST00000620787 HOXB6P17509 224 aaKnown RBP19.14■□□□□ 0.65
PDLIM3-212ENST00000620787 GNPDA1P46926 289 aa19.14■□□□□ 0.65
PDLIM3-212ENST00000620787 TPTEP56180 551 aa19.14■□□□□ 0.65
PDLIM3-212ENST00000620787 CDC20Q12834 499 aa19.14■□□□□ 0.65
PDLIM3-212ENST00000620787 CCL14Q16627 93 aa19.14■□□□□ 0.65
PDLIM3-212ENST00000620787 MORN1Q5T089 497 aa19.14■□□□□ 0.65
PDLIM3-212ENST00000620787 LRIF1Q5T3J3 769 aa19.14■□□□□ 0.65
PDLIM3-212ENST00000620787 CACHD1Q5VU97 1274 aa19.14■□□□□ 0.65
PDLIM3-212ENST00000620787 KDM4DQ6B0I6 523 aa19.14■□□□□ 0.65
PDLIM3-212ENST00000620787 TAS2R42Q7RTR8 314 aa19.14■□□□□ 0.65
PDLIM3-212ENST00000620787 CLHC1Q8NHS4 586 aa19.14■□□□□ 0.65
PDLIM3-212ENST00000620787 FUBP3Q96I24 572 aaKnown RBP eCLIP19.14■□□□□ 0.65
PDLIM3-212ENST00000620787 SERHLQ9NQF3 203 aa19.14■□□□□ 0.65
PDLIM3-212ENST00000620787 OLA1Q9NTK5 396 aaKnown RBP19.14■□□□□ 0.65
PDLIM3-212ENST00000620787 ABCG2Q9UNQ0 655 aa19.14■□□□□ 0.65
PDLIM3-212ENST00000620787 PCDHGC4Q9Y5F7 938 aa19.14■□□□□ 0.65
PDLIM3-212ENST00000620787 A0A0U1RQF3 1178 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 MYADML2A6NDP7 307 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 RAD51BO15315 384 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 STX7O15400 261 aaKnown RBP19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 RGS10O43665 173 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 GUCA1CO95843 209 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 GLUD1P00367 558 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 MYCLP1P12525 358 aaPredicted RBP19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 ALDH7A1P49419 539 aaKnown RBP19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 SPRYD7Q5W111 196 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 RNF165Q6ZSG1 346 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 SNX20Q7Z614 316 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 LACC1Q8IV20 430 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 SVOPQ8N4V2 548 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 ZNF540Q8NDQ6 660 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 SGIP1Q9BQI5 828 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 MAGEH1Q9H213 219 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 LRTM1Q9HBL6 345 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 GMPPBQ9Y5P6 360 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 SCN10AQ9Y5Y9 1956 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 ZBBXA8MT70 800 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 SEC22BO75396 215 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 ERN1O75460 977 aaKnown RBP19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 HOXB9P17482 250 aaPredicted RBP19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 IL1RL1Q01638 556 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 MVKQ03426 396 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 FADDQ13158 208 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 MAP2K5Q13163 448 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 DSC3Q14574 896 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 MAD2L1BPQ15013 274 aaPredicted RBP19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 USP39Q53GS9 565 aaKnown RBP19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 TRIM46Q7Z4K8 759 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 RGL4Q8IZJ4 473 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 TTC16Q8NEE8 873 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 PSMA8Q8TAA3 256 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 PYCR2Q96C36 320 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 CCDC97Q96F63 343 aaPredicted RBP19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 DACH2Q96NX9 599 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 SLCO3A1Q9UIG8 710 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 ZNF229Q9UJW7 825 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 RAI2Q9Y5P3 530 aa19.13■□□□□ 0.65
PDLIM3-212ENST00000620787 A0A096LPI6 279 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms