RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 SLC10A3P09131 477 aa11.53□□□□□ -0.56
C11orf54-215ENST00000617482 ITGALP20701 1170 aa11.53□□□□□ -0.56
C11orf54-215ENST00000617482 ACRV1P26436 265 aa11.53□□□□□ -0.56
C11orf54-215ENST00000617482 GSTM2P28161 218 aa11.53□□□□□ -0.56
C11orf54-215ENST00000617482 HNF1BP35680 557 aa11.53□□□□□ -0.56
C11orf54-215ENST00000617482 DCTP40126 519 aa11.53□□□□□ -0.56
C11orf54-215ENST00000617482 MLLT10P55197 1068 aa11.53□□□□□ -0.56
C11orf54-215ENST00000617482 SMAD3P84022 425 aaKnown RBP11.53□□□□□ -0.56
C11orf54-215ENST00000617482 CDH18Q13634 790 aa11.53□□□□□ -0.56
C11orf54-215ENST00000617482 DPY19L1Q2PZI1 675 aa11.53□□□□□ -0.56
C11orf54-215ENST00000617482 USP39Q53GS9 565 aaKnown RBP11.53□□□□□ -0.56
C11orf54-215ENST00000617482 GALNT18Q6P9A2 607 aa11.53□□□□□ -0.56
C11orf54-215ENST00000617482 GALNT5Q7Z7M9 940 aa11.53□□□□□ -0.56
C11orf54-215ENST00000617482 APCDD1Q8J025 514 aa11.53□□□□□ -0.56
C11orf54-215ENST00000617482 EID3Q8N140 333 aa11.53□□□□□ -0.56
C11orf54-215ENST00000617482 GLB1L3Q8NCI6 653 aaPredicted RBP11.53□□□□□ -0.56
C11orf54-215ENST00000617482 RAB2BQ8WUD1 216 aa11.53□□□□□ -0.56
C11orf54-215ENST00000617482 FAM120BQ96EK7 910 aaKnown RBP11.53□□□□□ -0.56
C11orf54-215ENST00000617482 SLC22A12Q96S37 553 aa11.53□□□□□ -0.56
C11orf54-215ENST00000617482 KLF16Q9BXK1 252 aaPredicted RBP11.53□□□□□ -0.56
C11orf54-215ENST00000617482 C1orf109Q9NX04 203 aa11.53□□□□□ -0.56
C11orf54-215ENST00000617482 DGKBQ9Y6T7 804 aa11.53□□□□□ -0.56
C11orf54-215ENST00000617482 FRMPD3Q5JV73 1810 aa11.53□□□□□ -0.56
C11orf54-215ENST00000617482 GLYATL1P3A0A0U1RQE8 302 aa11.52□□□□□ -0.56
C11orf54-215ENST00000617482 BOLA2-SMG1P6H3BVE0 249 aa11.52□□□□□ -0.56
C11orf54-215ENST00000617482 STK16O75716 305 aa11.52□□□□□ -0.56
C11orf54-215ENST00000617482 LRATO95237 230 aa11.52□□□□□ -0.56
C11orf54-215ENST00000617482 PDYNP01213 254 aa11.52□□□□□ -0.56
C11orf54-215ENST00000617482 EBLN1P0CF75 366 aa11.52□□□□□ -0.56
C11orf54-215ENST00000617482 RPS3P23396 243 aaKnown RBP eCLIP11.52□□□□□ -0.566e-6■■■□□ 17.9
C11orf54-215ENST00000617482 ATP1A4Q13733 1029 aa11.52□□□□□ -0.56
C11orf54-215ENST00000617482 TUBA3CQ13748 450 aa11.52□□□□□ -0.56
C11orf54-215ENST00000617482 GPNMBQ14956 572 aa11.52□□□□□ -0.56
C11orf54-215ENST00000617482 PGS1Q32NB8 556 aa11.52□□□□□ -0.56
C11orf54-215ENST00000617482 GPR149Q86SP6 731 aa11.52□□□□□ -0.56
C11orf54-215ENST00000617482 TSPAN33Q86UF1 283 aa11.52□□□□□ -0.56
C11orf54-215ENST00000617482 ADHFE1Q8IWW8 467 aa11.52□□□□□ -0.56
C11orf54-215ENST00000617482 SVOPLQ8N434 492 aa11.52□□□□□ -0.56
C11orf54-215ENST00000617482 RDH12Q96NR8 316 aa11.52□□□□□ -0.56
C11orf54-215ENST00000617482 TSSK3Q96PN8 268 aa11.52□□□□□ -0.56
C11orf54-215ENST00000617482 NTMT1Q9BV86 223 aa11.52□□□□□ -0.56
C11orf54-215ENST00000617482 FUNDC2Q9BWH2 189 aa11.52□□□□□ -0.56
C11orf54-215ENST00000617482 ACPTQ9BZG2 426 aa11.52□□□□□ -0.56
C11orf54-215ENST00000617482 TNKS2Q9H2K2 1166 aa11.52□□□□□ -0.56
C11orf54-215ENST00000617482 PARVBQ9HBI1 364 aa11.52□□□□□ -0.56
C11orf54-215ENST00000617482 CHCHD3Q9NX63 227 aaKnown RBP11.52□□□□□ -0.56
C11orf54-215ENST00000617482 AASSQ9UDR5 926 aa11.52□□□□□ -0.56
C11orf54-215ENST00000617482 BAG5Q9UL15 447 aa11.52□□□□□ -0.56
C11orf54-215ENST00000617482 XPNPEP2O43895 674 aa11.52□□□□□ -0.57
C11orf54-215ENST00000617482 MITFO75030 526 aaPredicted RBP11.52□□□□□ -0.57
C11orf54-215ENST00000617482 INMTO95050 263 aa11.52□□□□□ -0.57
C11orf54-215ENST00000617482 C1QCP02747 245 aa11.52□□□□□ -0.57
C11orf54-215ENST00000617482 COL6A1P12109 1028 aa11.52□□□□□ -0.57
C11orf54-215ENST00000617482 TACR1P25103 407 aa11.52□□□□□ -0.57
C11orf54-215ENST00000617482 HTR1BP28222 390 aa11.52□□□□□ -0.57
C11orf54-215ENST00000617482 CDKN2CP42773 168 aa11.52□□□□□ -0.57
C11orf54-215ENST00000617482 ISL1P61371 349 aa11.52□□□□□ -0.57
C11orf54-215ENST00000617482 IL1RL1Q01638 556 aa11.52□□□□□ -0.57
C11orf54-215ENST00000617482 BCL2L1Q07817 233 aa11.52□□□□□ -0.57
C11orf54-215ENST00000617482 SPCS2Q15005 226 aa11.52□□□□□ -0.57
C11orf54-215ENST00000617482 TCTN1Q2MV58 587 aa11.52□□□□□ -0.57
C11orf54-215ENST00000617482 SLC8B1Q6J4K2 584 aa11.52□□□□□ -0.57
C11orf54-215ENST00000617482 KIAA1841Q6NSI8 718 aa11.52□□□□□ -0.57
C11orf54-215ENST00000617482 CRTC3Q6UUV7 619 aa11.52□□□□□ -0.57
C11orf54-215ENST00000617482 MAMSTRQ6ZN01 415 aa11.52□□□□□ -0.57
C11orf54-215ENST00000617482 PJA1Q8NG27 643 aa11.52□□□□□ -0.57
C11orf54-215ENST00000617482 CNIH3Q8TBE1 160 aa11.52□□□□□ -0.57
C11orf54-215ENST00000617482 COX4I2Q96KJ9 171 aa11.52□□□□□ -0.57
C11orf54-215ENST00000617482 PAK1IP1Q9NWT1 392 aaPredicted RBP11.52□□□□□ -0.57
C11orf54-215ENST00000617482 C3orf18Q9UK00 162 aa11.52□□□□□ -0.57
C11orf54-215ENST00000617482 DOLKQ9UPQ8 538 aa11.52□□□□□ -0.57
C11orf54-215ENST00000617482 OR51B4Q9Y5P0 310 aa11.52□□□□□ -0.57
C11orf54-215ENST00000617482 KRT87PA6NCN2 255 aa11.51□□□□□ -0.57
C11orf54-215ENST00000617482 CLPXO76031 633 aa11.51□□□□□ -0.57
C11orf54-215ENST00000617482 CLDN9O95484 217 aa11.51□□□□□ -0.57
C11orf54-215ENST00000617482 TRBC1P01850 177 aa11.51□□□□□ -0.57
C11orf54-215ENST00000617482 FSHRP23945 695 aa11.51□□□□□ -0.57
C11orf54-215ENST00000617482 S100A3P33764 101 aa11.51□□□□□ -0.57
C11orf54-215ENST00000617482 MAGEA8P43361 318 aa11.51□□□□□ -0.57
C11orf54-215ENST00000617482 RPIAP49247 311 aa11.51□□□□□ -0.57
C11orf54-215ENST00000617482 RPS14P62263 151 aaKnown RBP11.51□□□□□ -0.57
C11orf54-215ENST00000617482 ZXDBP98169 803 aa11.51□□□□□ -0.57
C11orf54-215ENST00000617482 NR1D2Q14995 579 aa11.51□□□□□ -0.57
C11orf54-215ENST00000617482 CES5AQ6NT32 575 aa11.51□□□□□ -0.57
C11orf54-215ENST00000617482 DCP2Q8IU60 420 aaKnown RBP11.51□□□□□ -0.57
C11orf54-215ENST00000617482 ARL10Q8N8L6 244 aa11.51□□□□□ -0.57
C11orf54-215ENST00000617482 OR5K1Q8NHB7 308 aa11.51□□□□□ -0.57
C11orf54-215ENST00000617482 SKA2Q8WVK7 121 aaPredicted RBP11.51□□□□□ -0.57
C11orf54-215ENST00000617482 SELENOMQ8WWX9 145 aa11.51□□□□□ -0.57
C11orf54-215ENST00000617482 OVCA2Q8WZ82 227 aa11.51□□□□□ -0.57
C11orf54-215ENST00000617482 USP7Q93009 1102 aa11.51□□□□□ -0.57
C11orf54-215ENST00000617482 EGLN2Q96KS0 407 aa11.51□□□□□ -0.57
C11orf54-215ENST00000617482 BARD1Q99728 777 aaKnown RBP11.51□□□□□ -0.57
C11orf54-215ENST00000617482 RAD21L1Q9H4I0 556 aa11.51□□□□□ -0.57
C11orf54-215ENST00000617482 ELAC1Q9H777 363 aaKnown RBP11.51□□□□□ -0.57
C11orf54-215ENST00000617482 GPN2Q9H9Y4 310 aaPredicted RBP11.51□□□□□ -0.57
C11orf54-215ENST00000617482 SERHLQ9NQF3 203 aa11.51□□□□□ -0.57
C11orf54-215ENST00000617482 STARD7Q9NQZ5 370 aa11.51□□□□□ -0.57
C11orf54-215ENST00000617482 TBCCD1Q9NVR7 557 aa11.51□□□□□ -0.57
C11orf54-215ENST00000617482 ARL15Q9NXU5 204 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms