RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 ACAP2Q15057 778 aa15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 KLC3Q6P597 504 aa15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 USP53Q70EK8 1073 aa15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 SPRED1Q7Z699 444 aa15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 ADAMTSL2Q86TH1 951 aa15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 AMIGO1Q86WK6 493 aa15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 GPSM1Q86YR5 675 aa15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 SRRM1Q8IYB3 904 aaKnown RBP15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 C2orf73Q8N5S3 287 aaPredicted RBP15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 LMNTD1Q8N9Z9 388 aa15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 STAG3L4Q8TBR4 150 aa15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 CCDC138Q96M89 665 aa15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 VIPAS39Q9H9C1 493 aa15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 TMBIM4Q9HC24 238 aa15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 ARL15Q9NXU5 204 aa15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 LNPEPQ9UIQ6 1025 aa15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 RNF112Q9ULX5 631 aa15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 LAMA1P25391 3075 aa15.16■□□□□ 0.02
PCDHGC3-204ENST00000617222 IGHV1OR21-1A0A087WYE8 117 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 OR6C74A6NCV1 312 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 GOLGA6L10A6NI86 522 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 MAP2K7O14733 419 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 GIPC1O14908 333 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 UBXN7O94888 489 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 PROS1P07225 676 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 GP1BAP07359 652 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 ENO2P09104 434 aaPredicted RBP15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 RBP1P09455 135 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 SDHBP21912 280 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 CD1CP29017 333 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 RAB28P51157 221 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 NOVA1P51513 510 aaKnown RBP15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 EPHA4P54764 986 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 PPP1R3AQ16821 1122 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 TSNAXIP1Q2TAA8 658 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 C16orf46Q6P387 395 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 MBOAT1Q6ZNC8 495 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 FRA10AC1Q70Z53 315 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 GLRX5Q86SX6 157 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 RAB42Q8N4Z0 105 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 OR10G6Q8NH81 332 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 DENND1AQ8TEH3 1009 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 EXT2Q93063 718 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 PGM2Q96G03 612 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 AHCYL2Q96HN2 611 aaKnown RBP15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 MENTQ9BUN1 341 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 LRRN3Q9H3W5 708 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 SYNDIG1Q9H7V2 258 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 RDH14Q9HBH5 336 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 ZNF446Q9NWS9 450 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 OGFRQ9NZT2 677 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 TMEM216Q9P0N5 145 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 DCDC2Q9UHG0 476 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 OARD1Q9Y530 152 aa15.15■□□□□ 0.02
PCDHGC3-204ENST00000617222 WDR87Q6ZQQ6 2873 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 DNAH14Q0VDD8 3507 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 ZNF292O60281 2723 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 A0A1W2PQM1 296 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 BTN3A3O00478 584 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 COPEO14579 308 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 KERAO60938 352 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 RFPL3O75679 317 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 SASH3O75995 380 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 SLC16A8O95907 504 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 RPLP0P05388 317 aaKnown RBP15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 CEACAM1P13688 526 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 CREB1P16220 341 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 POLR2CP19387 275 aaPredicted RBP15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 PKLRP30613 574 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 SHMT2P34897 504 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 CRHR1P34998 444 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 CCT5P48643 541 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 AP1S2P56377 157 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 GPLD1P80108 840 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 SIM1P81133 766 aaPredicted RBP15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 ILKQ13418 452 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 TGFBIQ15582 683 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 TNFAIP8L3Q5GJ75 292 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 KLHL35Q6PF15 583 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 CDHR3Q6ZTQ4 885 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 SLCO6A1Q86UG4 719 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 RHEBL1Q8TAI7 183 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 NCSTNQ92542 709 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 RSC1A1Q92681 617 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 SMC6Q96SB8 1091 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 RTKNQ9BST9 563 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 ABCG4Q9H172 646 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 HRASLS2Q9NWW9 162 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 TOR4AQ9NXH8 423 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 CD274Q9NZQ7 290 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 SPATA7Q9P0W8 599 aa15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 ATXN7L1Q9ULK2 861 aaPredicted RBP15.14■□□□□ 0.01
PCDHGC3-204ENST00000617222 CCDC189A1A4V9 331 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 DCDC2BA2VCK2 349 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 FAM221BA6H8Z2 402 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 OR5K3A6NET4 321 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 NCF1BA6NI72 391 aaPredicted RBP15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 NCF1CA8MVU1 366 aaPredicted RBP15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 DUX1O43812 170 aa15.13■□□□□ 0.01
PCDHGC3-204ENST00000617222 GLRA3O75311 464 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms