RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 PDZK1P1A8MUH7 402 aa17.11■□□□□ 0.33
TRAPPC3-209ENST00000616395 FZD6O60353 706 aa17.11■□□□□ 0.33
TRAPPC3-209ENST00000616395 METTL18O95568 372 aa17.11■□□□□ 0.33
TRAPPC3-209ENST00000616395 MMP2P08253 660 aa17.11■□□□□ 0.33
TRAPPC3-209ENST00000616395 RAB40ALP0C0E4 278 aa17.11■□□□□ 0.33
TRAPPC3-209ENST00000616395 ITGA3P26006 1051 aa17.11■□□□□ 0.33
TRAPPC3-209ENST00000616395 STX2P32856 288 aa17.11■□□□□ 0.33
TRAPPC3-209ENST00000616395 WASHC5Q12768 1159 aa17.11■□□□□ 0.33
TRAPPC3-209ENST00000616395 ATP1A4Q13733 1029 aa17.11■□□□□ 0.33
TRAPPC3-209ENST00000616395 ZNF648Q5T619 568 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC3-209ENST00000616395 ALG1LQ6GMV1 187 aa17.11■□□□□ 0.33
TRAPPC3-209ENST00000616395 TMEM126BQ8IUX1 230 aa17.11■□□□□ 0.33
TRAPPC3-209ENST00000616395 NDUFAF2Q8N183 169 aa17.11■□□□□ 0.33
TRAPPC3-209ENST00000616395 FAM76AQ8TAV0 307 aa17.11■□□□□ 0.33
TRAPPC3-209ENST00000616395 ATP6V1G3Q96LB4 118 aa17.11■□□□□ 0.33
TRAPPC3-209ENST00000616395 AGAP3Q96P47 875 aa17.11■□□□□ 0.33
TRAPPC3-209ENST00000616395 TMBIM4Q9HC24 238 aa17.11■□□□□ 0.33
TRAPPC3-209ENST00000616395 SAMD15Q9P1V8 674 aa17.11■□□□□ 0.33
TRAPPC3-209ENST00000616395 CHKBQ9Y259 395 aa17.11■□□□□ 0.33
TRAPPC3-209ENST00000616395 PCDHGA10Q9Y5H3 936 aa17.11■□□□□ 0.33
TRAPPC3-209ENST00000616395 A0A0J9YYE9 177 aa17.1■□□□□ 0.33
TRAPPC3-209ENST00000616395 EXOC1LA0A1B0GW35 172 aa17.1■□□□□ 0.33
TRAPPC3-209ENST00000616395 TLDC2A0PJX2 215 aa17.1■□□□□ 0.33
TRAPPC3-209ENST00000616395 MAGEB16A2A368 324 aa17.1■□□□□ 0.33
TRAPPC3-209ENST00000616395 OR52A4PA6NMU1 304 aa17.1■□□□□ 0.33
TRAPPC3-209ENST00000616395 TP73O15350 636 aa17.1■□□□□ 0.33
TRAPPC3-209ENST00000616395 CLDN7O95471 211 aa17.1■□□□□ 0.33
TRAPPC3-209ENST00000616395 TRBC1P01850 177 aa17.1■□□□□ 0.33
TRAPPC3-209ENST00000616395 KLK3P07288 261 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC3-209ENST00000616395 BRAFP15056 766 aa17.1■□□□□ 0.33
TRAPPC3-209ENST00000616395 CD86P42081 329 aa17.1■□□□□ 0.33
TRAPPC3-209ENST00000616395 ZNF844Q08AG5 666 aa17.1■□□□□ 0.33
TRAPPC3-209ENST00000616395 PLA2G4EQ3MJ16 856 aa17.1■□□□□ 0.33
TRAPPC3-209ENST00000616395 ANKRD22Q5VYY1 191 aa17.1■□□□□ 0.33
TRAPPC3-209ENST00000616395 LRRC8BQ6P9F7 803 aa17.1■□□□□ 0.33
TRAPPC3-209ENST00000616395 CRTC3Q6UUV7 619 aa17.1■□□□□ 0.33
TRAPPC3-209ENST00000616395 GDF7Q7Z4P5 450 aa17.1■□□□□ 0.33
TRAPPC3-209ENST00000616395 FBXO36Q8NEA4 188 aa17.1■□□□□ 0.33
TRAPPC3-209ENST00000616395 PGM2Q96G03 612 aa17.1■□□□□ 0.33
TRAPPC3-209ENST00000616395 POM121Q96HA1 1249 aa17.1■□□□□ 0.33
TRAPPC3-209ENST00000616395 SGSM3Q96HU1 749 aa17.1■□□□□ 0.33
TRAPPC3-209ENST00000616395 TDRD1Q9BXT4 1180 aaKnown RBP17.1■□□□□ 0.33
TRAPPC3-209ENST00000616395 NLNQ9BYT8 704 aa17.1■□□□□ 0.33
TRAPPC3-209ENST00000616395 AGPAT4Q9NRZ5 378 aa17.1■□□□□ 0.33
TRAPPC3-209ENST00000616395 BFARQ9NZS9 450 aa17.1■□□□□ 0.33
TRAPPC3-209ENST00000616395 COPG2Q9UBF2 871 aa17.1■□□□□ 0.33
TRAPPC3-209ENST00000616395 FETUBQ9UGM5 382 aa17.1■□□□□ 0.33
TRAPPC3-209ENST00000616395 DNAJC16Q9Y2G8 782 aa17.1■□□□□ 0.33
TRAPPC3-209ENST00000616395 SDR42E2A6NKP2 422 aa17.09■□□□□ 0.33
TRAPPC3-209ENST00000616395 AGPSO00116 658 aa17.09■□□□□ 0.33
TRAPPC3-209ENST00000616395 MEN1O00255 615 aa17.09■□□□□ 0.33
TRAPPC3-209ENST00000616395 CDH16O75309 829 aa17.09■□□□□ 0.33
TRAPPC3-209ENST00000616395 AP2A1O95782 977 aa17.09■□□□□ 0.33
TRAPPC3-209ENST00000616395 SYF2O95926 243 aaKnown RBP17.09■□□□□ 0.33
TRAPPC3-209ENST00000616395 AGTP01019 485 aa17.09■□□□□ 0.33
TRAPPC3-209ENST00000616395 PSMB4P28070 264 aa17.09■□□□□ 0.33
TRAPPC3-209ENST00000616395 CA5AP35218 305 aa17.09■□□□□ 0.33
TRAPPC3-209ENST00000616395 NPY2RP49146 381 aa17.09■□□□□ 0.33
TRAPPC3-209ENST00000616395 ARL4DP49703 201 aa17.09■□□□□ 0.33
TRAPPC3-209ENST00000616395 GPR19Q15760 415 aa17.09■□□□□ 0.33
TRAPPC3-209ENST00000616395 INSCQ1MX18 579 aa17.09■□□□□ 0.33
TRAPPC3-209ENST00000616395 RALGPS1Q5JS13 557 aa17.09■□□□□ 0.33
TRAPPC3-209ENST00000616395 PLEKHS1Q5SXH7 462 aa17.09■□□□□ 0.33
TRAPPC3-209ENST00000616395 HENMT1Q5T8I9 393 aaKnown RBP17.09■□□□□ 0.33
TRAPPC3-209ENST00000616395 ARMC3Q5W041 872 aa17.09■□□□□ 0.33
TRAPPC3-209ENST00000616395 IGFL3Q6UXB1 125 aa17.09■□□□□ 0.33
TRAPPC3-209ENST00000616395 CUZD1Q86UP6 607 aa17.09■□□□□ 0.33
TRAPPC3-209ENST00000616395 KCNMB4Q86W47 210 aa17.09■□□□□ 0.33
TRAPPC3-209ENST00000616395 DNAAF3Q8N9W5 541 aa17.09■□□□□ 0.33
TRAPPC3-209ENST00000616395 LPCAT1Q8NF37 534 aa17.09■□□□□ 0.33
TRAPPC3-209ENST00000616395 FCRL5Q96RD9 977 aa17.09■□□□□ 0.33
TRAPPC3-209ENST00000616395 MAP3K3Q99759 626 aa17.09■□□□□ 0.33
TRAPPC3-209ENST00000616395 OR2AG1Q9H205 316 aa17.09■□□□□ 0.33
TRAPPC3-209ENST00000616395 GLOD4Q9HC38 313 aa17.09■□□□□ 0.33
TRAPPC3-209ENST00000616395 MAD1L1Q9Y6D9 718 aa17.09■□□□□ 0.33
TRAPPC3-209ENST00000616395 POLEQ07864 2286 aa17.08■□□□□ 0.33
TRAPPC3-209ENST00000616395 E2F3O00716 465 aa17.08■□□□□ 0.32
TRAPPC3-209ENST00000616395 POLR3GO15318 223 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC3-209ENST00000616395 PRLP01236 227 aa17.08■□□□□ 0.32
TRAPPC3-209ENST00000616395 NFKB1P19838 968 aa17.08■□□□□ 0.32
TRAPPC3-209ENST00000616395 CES1P23141 567 aa17.08■□□□□ 0.32
TRAPPC3-209ENST00000616395 RPL10P27635 214 aaKnown RBP17.08■□□□□ 0.32
TRAPPC3-209ENST00000616395 EPHB1P54762 984 aa17.08■□□□□ 0.32
TRAPPC3-209ENST00000616395 GALNT3Q14435 633 aa17.08■□□□□ 0.32
TRAPPC3-209ENST00000616395 LGSNQ5TDP6 509 aa17.08■□□□□ 0.32
TRAPPC3-209ENST00000616395 PRAMEF17Q5VTA0 474 aa17.08■□□□□ 0.32
TRAPPC3-209ENST00000616395 CASC4Q6P4E1 433 aa17.08■□□□□ 0.32
TRAPPC3-209ENST00000616395 ABRAXAS1Q6UWZ7 409 aa17.08■□□□□ 0.32
TRAPPC3-209ENST00000616395 C3orf62Q6ZUJ4 267 aa17.08■□□□□ 0.32
TRAPPC3-209ENST00000616395 GABPB2Q8TAK5 448 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC3-209ENST00000616395 CXorf40BQ96DE9 158 aa17.08■□□□□ 0.32
TRAPPC3-209ENST00000616395 LRFN5Q96NI6 719 aa17.08■□□□□ 0.32
TRAPPC3-209ENST00000616395 CYTH2Q99418 400 aa17.08■□□□□ 0.32
TRAPPC3-209ENST00000616395 FSD1LQ9BXM9 530 aa17.08■□□□□ 0.32
TRAPPC3-209ENST00000616395 FAM83DQ9H4H8 585 aa17.08■□□□□ 0.32
TRAPPC3-209ENST00000616395 ZC3H7BQ9UGR2 993 aaKnown RBP17.08■□□□□ 0.32
TRAPPC3-209ENST00000616395 SLC24A2Q9UI40 661 aa17.08■□□□□ 0.32
TRAPPC3-209ENST00000616395 NFS1Q9Y697 457 aa17.08■□□□□ 0.32
TRAPPC3-209ENST00000616395 TACC2O95359 2948 aa17.08■□□□□ 0.32
TRAPPC3-209ENST00000616395 SUN1O94901 812 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms