RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 ARHGAP22Q7Z5H3 698 aa4.84□□□□□ -1.63
RFC3-203ENST00000616236 SYVN1Q86TM6 617 aa4.84□□□□□ -1.63
RFC3-203ENST00000616236 ARHGEF25Q86VW2 580 aa4.84□□□□□ -1.63
RFC3-203ENST00000616236 ANKRD46Q86W74 232 aa4.84□□□□□ -1.63
RFC3-203ENST00000616236 CFAP206Q8IYR0 622 aa4.84□□□□□ -1.63
RFC3-203ENST00000616236 TTC9BQ8N6N2 239 aa4.84□□□□□ -1.63
RFC3-203ENST00000616236 L3MBTL4Q8NA19 623 aa4.84□□□□□ -1.63
RFC3-203ENST00000616236 SLC44A5Q8NCS7 719 aa4.84□□□□□ -1.63
RFC3-203ENST00000616236 TMEM174Q8WUU8 243 aa4.84□□□□□ -1.63
RFC3-203ENST00000616236 SLC44A1Q8WWI5 657 aa4.84□□□□□ -1.63
RFC3-203ENST00000616236 CDK5RAP1Q96SZ6 601 aaKnown RBP4.84□□□□□ -1.63
RFC3-203ENST00000616236 CMKLR1Q99788 373 aa4.84□□□□□ -1.63
RFC3-203ENST00000616236 BDH2Q9BUT1 245 aa4.84□□□□□ -1.63
RFC3-203ENST00000616236 SLC2A11Q9BYW1 496 aa4.84□□□□□ -1.63
RFC3-203ENST00000616236 SPRY4Q9C004 299 aa4.84□□□□□ -1.63
RFC3-203ENST00000616236 DDX47Q9H0S4 455 aaKnown RBP4.84□□□□□ -1.63
RFC3-203ENST00000616236 PARD6AQ9NPB6 346 aa4.84□□□□□ -1.63
RFC3-203ENST00000616236 FAM212BQ9NTI7 297 aaPredicted RBP4.84□□□□□ -1.63
RFC3-203ENST00000616236 TXNDC16Q9P2K2 825 aa4.84□□□□□ -1.63
RFC3-203ENST00000616236 ANKMY1Q9P2S6 941 aa4.84□□□□□ -1.63
RFC3-203ENST00000616236 EXTL2Q9UBQ6 330 aa4.84□□□□□ -1.63
RFC3-203ENST00000616236 HPCAL4Q9UM19 191 aa4.84□□□□□ -1.63
RFC3-203ENST00000616236 GPR89AB7ZAQ6 455 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 VWA5AO00534 786 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 FOXN1O15353 648 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 NDUFS7O75251 213 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 GPR89BP0CG08 455 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 PDHBP11177 359 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 KELP23276 732 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 DNAJB1P25685 340 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 PTGER4P35408 488 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 IER3P46695 156 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 PITPNBP48739 271 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 HNRNPFP52597 415 aaKnown RBP4.83□□□□□ -1.64
RFC3-203ENST00000616236 SELENOVP59797 346 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 PMP22Q01453 160 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 PNRC1Q12796 327 aaPredicted RBP4.83□□□□□ -1.64
RFC3-203ENST00000616236 CTTNQ14247 550 aaKnown RBP4.83□□□□□ -1.64
RFC3-203ENST00000616236 CTF1Q16619 201 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 PTGISQ16647 500 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 ZNF284Q2VY69 593 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 FASTKD1Q53R41 847 aaKnown RBP4.83□□□□□ -1.64
RFC3-203ENST00000616236 ARMCX2Q7L311 632 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 ZNF367Q7RTV3 350 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 TAF8Q7Z7C8 310 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 AADATQ8N5Z0 425 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 C1orf52Q8N6N3 182 aaKnown RBP4.83□□□□□ -1.64
RFC3-203ENST00000616236 SSMEM1Q8WWF3 244 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 DNAAF4Q8WXU2 420 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 SHC3Q92529 594 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 FIG4Q92562 907 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 PROX1Q92786 737 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 SARAFQ96BY9 339 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 MTERF3Q96E29 417 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 CFAP36Q96G28 342 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 APOLD1Q96LR9 279 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 MYADMQ96S97 322 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 PCYT2Q99447 389 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 SLX1AQ9BQ83 275 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 CCSER1Q9C0I3 900 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 RAB17Q9H0T7 212 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 VPS33BQ9H267 617 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 KLK15Q9H2R5 256 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 CUEDC2Q9H467 287 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 MAGEF1Q9HAY2 307 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 KCNMB3Q9NPA1 279 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 LAMP5Q9UJQ1 280 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 KIF3AQ9Y496 699 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 LOXL2Q9Y4K0 774 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 SRPRBQ9Y5M8 271 aaKnown RBP4.83□□□□□ -1.64
RFC3-203ENST00000616236 TAF1P21675 1872 aa4.83□□□□□ -1.64
RFC3-203ENST00000616236 A0A1W2PP11 408 aa4.82□□□□□ -1.64
RFC3-203ENST00000616236 MACROD2A1Z1Q3 448 aa4.82□□□□□ -1.64
RFC3-203ENST00000616236 HYKKA2RU49 373 aa4.82□□□□□ -1.64
RFC3-203ENST00000616236 H0YCG3 227 aa4.82□□□□□ -1.64
RFC3-203ENST00000616236 ITM2AO43736 263 aa4.82□□□□□ -1.64
RFC3-203ENST00000616236 AK1P00568 194 aa4.82□□□□□ -1.64
RFC3-203ENST00000616236 CTSAP10619 480 aa4.82□□□□□ -1.64
RFC3-203ENST00000616236 PRG2P13727 222 aa4.82□□□□□ -1.64
RFC3-203ENST00000616236 PBLDP30039 288 aaPredicted RBP4.82□□□□□ -1.64
RFC3-203ENST00000616236 PSMC4P43686 418 aa4.82□□□□□ -1.64
RFC3-203ENST00000616236 RPS13P62277 151 aaKnown RBP4.82□□□□□ -1.64
RFC3-203ENST00000616236 MAT1AQ00266 395 aaKnown RBP4.82□□□□□ -1.64
RFC3-203ENST00000616236 MCMDC2Q4G0Z9 681 aa4.82□□□□□ -1.64
RFC3-203ENST00000616236 SYT14P1Q58G82 188 aa4.82□□□□□ -1.64
RFC3-203ENST00000616236 MIIPQ5JXC2 388 aa4.82□□□□□ -1.64
RFC3-203ENST00000616236 PAPPA-AS1Q5QFB9 102 aa4.82□□□□□ -1.64
RFC3-203ENST00000616236 HECTD2Q5U5R9 776 aa4.82□□□□□ -1.64
RFC3-203ENST00000616236 FAM46CQ5VWP2 391 aa4.82□□□□□ -1.64
RFC3-203ENST00000616236 PAPD7Q5XG87 772 aaKnown RBP4.82□□□□□ -1.64
RFC3-203ENST00000616236 IRGCQ6NXR0 463 aa4.82□□□□□ -1.64
RFC3-203ENST00000616236 AFTPHQ6ULP2 937 aa4.82□□□□□ -1.64
RFC3-203ENST00000616236 ASPGQ86U10 573 aa4.82□□□□□ -1.64
RFC3-203ENST00000616236 AMZ2Q86W34 360 aa4.82□□□□□ -1.64
RFC3-203ENST00000616236 MEX3DQ86XN8 651 aaKnown RBP4.82□□□□□ -1.64
RFC3-203ENST00000616236 TMEM126BQ8IUX1 230 aa4.82□□□□□ -1.64
RFC3-203ENST00000616236 Q8N3U1 123 aa4.82□□□□□ -1.64
RFC3-203ENST00000616236 BANPQ8N9N5 519 aa4.82□□□□□ -1.64
RFC3-203ENST00000616236 MIGA1Q8NAN2 632 aa4.82□□□□□ -1.64
RFC3-203ENST00000616236 SLC24A4Q8NFF2 622 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms