RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 EPORP19235 508 aa13.73□□□□□ -0.21
SSBP2-220ENST00000615665 EFNA1P20827 205 aaPredicted RBP13.73□□□□□ -0.21
SSBP2-220ENST00000615665 SLC6A2P23975 617 aa13.73□□□□□ -0.21
SSBP2-220ENST00000615665 HTR6P50406 440 aa13.73□□□□□ -0.21
SSBP2-220ENST00000615665 TP53BP2Q13625 1128 aa13.73□□□□□ -0.21
SSBP2-220ENST00000615665 ABRAXAS2Q15018 415 aa13.73□□□□□ -0.21
SSBP2-220ENST00000615665 SLC8B1Q6J4K2 584 aa13.73□□□□□ -0.21
SSBP2-220ENST00000615665 BRAT1Q6PJG6 821 aa13.73□□□□□ -0.21
SSBP2-220ENST00000615665 ZNF605Q86T29 641 aa13.73□□□□□ -0.21
SSBP2-220ENST00000615665 PATL1Q86TB9 770 aaKnown RBP13.73□□□□□ -0.21
SSBP2-220ENST00000615665 ANKFN1Q8N957 763 aa13.73□□□□□ -0.21
SSBP2-220ENST00000615665 GOLM1Q8NBJ4 401 aa13.73□□□□□ -0.21
SSBP2-220ENST00000615665 ZFAND2BQ8WV99 257 aa13.73□□□□□ -0.21
SSBP2-220ENST00000615665 ING5Q8WYH8 240 aa13.73□□□□□ -0.21
SSBP2-220ENST00000615665 BOCQ9BWV1 1114 aa13.73□□□□□ -0.21
SSBP2-220ENST00000615665 ZNF696Q9H7X3 374 aa13.73□□□□□ -0.21
SSBP2-220ENST00000615665 FANCEQ9HB96 536 aa13.73□□□□□ -0.21
SSBP2-220ENST00000615665 PDP1Q9P0J1 537 aaPredicted RBP13.73□□□□□ -0.21
SSBP2-220ENST00000615665 RIMS3Q9UJD0 308 aa13.73□□□□□ -0.21
SSBP2-220ENST00000615665 RGS5O15539 181 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 UGT2B11O75310 529 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 PRPS1L1P21108 318 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 CXCR2P25025 360 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 HTR1EP28566 365 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 PRDX3P30048 256 aaKnown RBP13.72□□□□□ -0.21
SSBP2-220ENST00000615665 KRT20P35900 424 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 FAM189BP81408 668 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 LDLRAP1Q5SW96 308 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 AFMIDQ63HM1 303 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.72□□□□□ -0.211e-8■■■■□ 21.4
SSBP2-220ENST00000615665 ZFAND4Q86XD8 727 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 CFAP206Q8IYR0 622 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 OTULINQ96BN8 352 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 FBXL20Q96IG2 436 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 MAELQ96JY0 434 aaKnown RBP13.72□□□□□ -0.21
SSBP2-220ENST00000615665 RIOK2Q9BVS4 552 aaKnown RBP13.72□□□□□ -0.21
SSBP2-220ENST00000615665 ANGPT4Q9Y264 503 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 FAM220BPB1ANY3 271 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 PRNPP04156 253 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 ALDOCP09972 364 aaKnown RBP13.72□□□□□ -0.21
SSBP2-220ENST00000615665 DGUOKQ16854 277 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 C18orf21Q32NC0 220 aaPredicted RBP13.72□□□□□ -0.21
SSBP2-220ENST00000615665 MED27Q6P2C8 311 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 PROX1Q92786 737 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 PLEKHA8Q96JA3 519 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 CMTM6Q9NX76 183 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 TRPS1Q9UHF7 1281 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 IKZF3Q9UKT9 509 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 PRSS51A0A1B0GVH4 220 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 FBP2O00757 339 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 PTPN5P54829 565 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 TUBA4AP68366 448 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 SGCGQ13326 291 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 ARSIQ5FYB1 569 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 OGFOD2Q6N063 350 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 RGL4Q8IZJ4 473 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 OR5K1Q8NHB7 308 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 FAM81AQ8TBF8 368 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 MARCH5Q9NX47 278 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 PDE10AQ9Y233 779 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 URB1O60287 2271 aaKnown RBP13.72□□□□□ -0.21
SSBP2-220ENST00000615665 CLIC3O95833 236 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 MMP2P08253 660 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 ITGA2P17301 1181 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 ELP6Q0PNE2 266 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 STON2Q8WXE9 905 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 ZFYVE19Q96K21 471 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 TTLL2Q9BWV7 592 aa13.72□□□□□ -0.21
SSBP2-220ENST00000615665 KLF16Q9BXK1 252 aaPredicted RBP13.72□□□□□ -0.21
SSBP2-220ENST00000615665 SHROOM3Q8TF72 1996 aa13.71□□□□□ -0.21
SSBP2-220ENST00000615665 hCG_2039718K7EN88 272 aa13.71□□□□□ -0.21
SSBP2-220ENST00000615665 SEC24AO95486 1093 aa13.71□□□□□ -0.21
SSBP2-220ENST00000615665 DGKGP49619 791 aa13.71□□□□□ -0.21
SSBP2-220ENST00000615665 RUNX1T1Q06455 604 aa13.71□□□□□ -0.21
SSBP2-220ENST00000615665 ATP6AP1Q15904 470 aa13.71□□□□□ -0.21
SSBP2-220ENST00000615665 OR4F3Q6IEY1 312 aa13.71□□□□□ -0.21
SSBP2-220ENST00000615665 LETMD1Q6P1Q0 360 aa13.71□□□□□ -0.21
SSBP2-220ENST00000615665 ZCCHC7Q8N3Z6 543 aaKnown RBP13.71□□□□□ -0.21
SSBP2-220ENST00000615665 SHKBP1Q8TBC3 707 aa13.71□□□□□ -0.21
SSBP2-220ENST00000615665 EZH1Q92800 747 aaPredicted RBP13.71□□□□□ -0.21
SSBP2-220ENST00000615665 TRIB3Q96RU7 358 aa13.71□□□□□ -0.21
SSBP2-220ENST00000615665 NDEL1Q9GZM8 345 aa13.71□□□□□ -0.21
SSBP2-220ENST00000615665 DEC1Q9P2X7 70 aa13.71□□□□□ -0.21
SSBP2-220ENST00000615665 VPS29Q9UBQ0 182 aa13.71□□□□□ -0.21
SSBP2-220ENST00000615665 DFNA5O60443 496 aa13.71□□□□□ -0.21
SSBP2-220ENST00000615665 CLTBP09497 229 aa13.71□□□□□ -0.21
SSBP2-220ENST00000615665 BPIP17213 487 aa13.71□□□□□ -0.21
SSBP2-220ENST00000615665 VIPR1P32241 457 aa13.71□□□□□ -0.21
SSBP2-220ENST00000615665 YAP1P46937 504 aaKnown RBP13.71□□□□□ -0.21
SSBP2-220ENST00000615665 KCNC1P48547 511 aa13.71□□□□□ -0.21
SSBP2-220ENST00000615665 SPIBQ01892 262 aa13.71□□□□□ -0.21
SSBP2-220ENST00000615665 ITGADQ13349 1161 aa13.71□□□□□ -0.21
SSBP2-220ENST00000615665 RAB33AQ14088 237 aa13.71□□□□□ -0.21
SSBP2-220ENST00000615665 PARP8Q8N3A8 854 aa13.71□□□□□ -0.21
SSBP2-220ENST00000615665 CHCHD4Q8N4Q1 142 aa13.71□□□□□ -0.21
SSBP2-220ENST00000615665 HMG20AQ9NP66 347 aa13.71□□□□□ -0.21
SSBP2-220ENST00000615665 PTBP2Q9UKA9 531 aaKnown RBP13.71□□□□□ -0.21
SSBP2-220ENST00000615665 ZNFX1Q9P2E3 1918 aaKnown RBP13.71□□□□□ -0.21
SSBP2-220ENST00000615665 SOCS2O14508 198 aa13.71□□□□□ -0.22
SSBP2-220ENST00000615665 FGF18O76093 207 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms