RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 GRIK5Q16478 980 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 CNPY1Q3B7I2 92 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 VARS2Q5ST30 1063 aaKnown RBP4.48□□□□□ -1.69
CHD9-221ENST00000615216 BRAT1Q6PJG6 821 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 PAOXQ6QHF9 649 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 NUDT13Q86X67 352 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 CRYBG2Q8N1P7 616 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 INO80EQ8NBZ0 244 aaPredicted RBP4.48□□□□□ -1.69
CHD9-221ENST00000615216 CNDP2Q96KP4 475 aaKnown RBP4.48□□□□□ -1.69
CHD9-221ENST00000615216 LMLNQ96KR4 655 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 KCTD7Q96MP8 289 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 KCNS3Q9BQ31 491 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 IFT27Q9BW83 186 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 CADM1Q9BY67 442 aaKnown RBP4.48□□□□□ -1.69
CHD9-221ENST00000615216 ABCG8Q9H221 673 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 TLE6Q9H808 572 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 ZNF639Q9UID6 485 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 K7EPI3 171 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 TP73O15350 636 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 ITGA10O75578 1167 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 IFNA7P01567 189 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 ALPPL2P10696 532 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 PTPN2P17706 415 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 ATP4BP51164 291 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 GALK1P51570 392 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 NRG3P56975 720 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 TIGD6Q17RP2 521 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 GET4Q7L5D6 327 aaPredicted RBP4.48□□□□□ -1.69
CHD9-221ENST00000615216 SATL1Q86VE3 508 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 GPR65Q8IYL9 337 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 NAT16Q8N8M0 369 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 RIPOR3Q96MK2 946 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 HHATLQ9HCP6 504 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 DPPA5A6NC42 116 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 CDK14O94921 469 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 PIGRP01833 764 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 EPHX1P07099 455 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 ZNF823P16415 610 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 TM4SF1P30408 202 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 RBM34P42696 430 aaKnown RBP4.48□□□□□ -1.69
CHD9-221ENST00000615216 CYP4F8P98187 520 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 NRG1Q02297 640 aaPredicted RBP4.48□□□□□ -1.69
CHD9-221ENST00000615216 FSTL1Q12841 308 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 ADAM15Q13444 863 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 UBXN11Q5T124 520 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 TMEM17Q86X19 198 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 ANKFN1Q8N957 763 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 OR6K2Q8NGY2 324 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 TRPM4Q8TD43 1214 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 DENND1AQ8TEH3 1009 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 ERLEC1Q96DZ1 483 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 AURKBQ96GD4 344 aaPredicted RBP4.48□□□□□ -1.69
CHD9-221ENST00000615216 SLC35A5Q9BS91 424 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 TCF7L1Q9HCS4 588 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 CHMP1AQ9HD42 196 aaPredicted RBP4.48□□□□□ -1.69
CHD9-221ENST00000615216 MKKSQ9NPJ1 570 aaPredicted RBP4.48□□□□□ -1.69
CHD9-221ENST00000615216 PRDM4Q9UKN5 801 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 TBC1D24Q9ULP9 559 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 MRPS17Q9Y2R5 130 aaKnown RBP4.48□□□□□ -1.69
CHD9-221ENST00000615216 ITGB4P16144 1822 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 COL1A1P02452 1464 aaPredicted RBP4.48□□□□□ -1.69
CHD9-221ENST00000615216 TCRBV7S2A1N4TA0A589 114 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 ZNF20P17024 532 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 MASP1P48740 699 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 ILF3Q12906 894 aaKnown RBP eCLIP4.48□□□□□ -1.696e-9■■■■□ 23.8
CHD9-221ENST00000615216 CA9Q16790 459 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 DUOXA1Q1HG43 343 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 ZBED5Q49AG3 693 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 FAM43BQ6ZT52 329 aaPredicted RBP4.48□□□□□ -1.69
CHD9-221ENST00000615216 LINGO2Q7L985 606 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 OR56A1Q8NGH5 318 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 HCAR2Q8TDS4 363 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 PIGKQ92643 395 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 BHLHE41Q9C0J9 482 aaPredicted RBP4.48□□□□□ -1.69
CHD9-221ENST00000615216 ZDHHC3Q9NYG2 299 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 PADI3Q9ULW8 664 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 POMPQ9Y244 141 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 PCDHGB5Q9Y5G0 923 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 IGLV3-22A0A075B6J6 115 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 ZNF487B1APH4 448 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 TULP2O00295 520 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 PIAS1O75925 651 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 CLUP10909 449 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 BRCC3P46736 316 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 CLCN2P51788 898 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 CBX3Q13185 183 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 CBLBQ13191 982 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 INAVAQ3KP66 663 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 CRTC2Q53ET0 693 aaPredicted RBP4.48□□□□□ -1.69
CHD9-221ENST00000615216 THOC7Q6I9Y2 204 aaKnown RBP4.48□□□□□ -1.69
CHD9-221ENST00000615216 CHRDL2Q6WN34 429 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 CEP68Q76N32 757 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 AMZ2Q86W34 360 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 PARP8Q8N3A8 854 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 GTPBP3Q969Y2 492 aaKnown RBP4.48□□□□□ -1.69
CHD9-221ENST00000615216 TMEM175Q9BSA9 504 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 EBF3Q9H4W6 596 aa4.48□□□□□ -1.69
CHD9-221ENST00000615216 RGS17Q9UGC6 210 aaPredicted RBP4.48□□□□□ -1.69
CHD9-221ENST00000615216 EVLQ9UI08 416 aaPredicted RBP4.48□□□□□ -1.69
CHD9-221ENST00000615216 FER1L6Q2WGJ9 1857 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms