RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 SLC45A3Q96JT2 553 aa2.98□□□□□ -1.93
CBWD3-209ENST00000614377 RNF170Q96K19 258 aa2.98□□□□□ -1.93
CBWD3-209ENST00000614377 FER1L6-AS2Q96M78 137 aa2.98□□□□□ -1.93
CBWD3-209ENST00000614377 FAM213AQ9BRX8 229 aa2.98□□□□□ -1.93
CBWD3-209ENST00000614377 TPPP3Q9BW30 176 aa2.98□□□□□ -1.93
CBWD3-209ENST00000614377 POLDIP3Q9BY77 421 aaKnown RBP2.98□□□□□ -1.93
CBWD3-209ENST00000614377 GSX2Q9BZM3 304 aa2.98□□□□□ -1.93
CBWD3-209ENST00000614377 SMG9Q9H0W8 520 aaKnown RBP2.98□□□□□ -1.93
CBWD3-209ENST00000614377 PDZD7Q9H5P4 517 aa2.98□□□□□ -1.93
CBWD3-209ENST00000614377 POLR1BQ9H9Y6 1135 aa2.98□□□□□ -1.93
CBWD3-209ENST00000614377 IL21RQ9HBE5 538 aa2.98□□□□□ -1.93
CBWD3-209ENST00000614377 GPRC5CQ9NQ84 441 aa2.98□□□□□ -1.93
CBWD3-209ENST00000614377 MBNL1Q9NR56 388 aaKnown RBP2.98□□□□□ -1.93
CBWD3-209ENST00000614377 FGFR1OP2Q9NVK5 253 aa2.98□□□□□ -1.93
CBWD3-209ENST00000614377 SPATA6Q9NWH7 488 aaPredicted RBP2.98□□□□□ -1.93
CBWD3-209ENST00000614377 B3GNT2Q9NY97 397 aa2.98□□□□□ -1.93
CBWD3-209ENST00000614377 MAT2BQ9NZL9 334 aa2.98□□□□□ -1.93
CBWD3-209ENST00000614377 SH3BP4Q9P0V3 963 aa2.98□□□□□ -1.93
CBWD3-209ENST00000614377 GPN3Q9UHW5 284 aaPredicted RBP2.98□□□□□ -1.93
CBWD3-209ENST00000614377 OGDHLQ9ULD0 1010 aa2.98□□□□□ -1.93
CBWD3-209ENST00000614377 RNF24Q9Y225 148 aa2.98□□□□□ -1.93
CBWD3-209ENST00000614377 SLC9A8Q9Y2E8 581 aa2.98□□□□□ -1.93
CBWD3-209ENST00000614377 SNX24Q9Y343 169 aa2.98□□□□□ -1.93
CBWD3-209ENST00000614377 ASB4Q9Y574 426 aa2.98□□□□□ -1.93
CBWD3-209ENST00000614377 U3KQV3 271 aa2.98□□□□□ -1.93
CBWD3-209ENST00000614377 MED14O60244 1454 aa2.98□□□□□ -1.93
CBWD3-209ENST00000614377 NEO1Q92859 1461 aa2.98□□□□□ -1.93
CBWD3-209ENST00000614377 PBRM1Q86U86 1689 aa2.98□□□□□ -1.93
CBWD3-209ENST00000614377 ASTN2O75129 1339 aaPredicted RBP2.98□□□□□ -1.93
CBWD3-209ENST00000614377 UBE4BO95155 1302 aa2.98□□□□□ -1.93
CBWD3-209ENST00000614377 KIF1AQ12756 1690 aa2.98□□□□□ -1.93
CBWD3-209ENST00000614377 LRRIQ1Q96JM4 1722 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 A0A0J9YYE9 177 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 C22orf46C9J442 243 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 F8W735 103 aaPredicted RBP2.97□□□□□ -1.93
CBWD3-209ENST00000614377 H0YGN5 161 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 DLL1O00548 723 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 EIF3DO15371 548 aaKnown RBP eCLIP2.97□□□□□ -1.93
CBWD3-209ENST00000614377 BUD23O43709 281 aaKnown RBP2.97□□□□□ -1.93
CBWD3-209ENST00000614377 SNX3O60493 162 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 SLC43A1O75387 559 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 PAGE1O75459 146 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 SCO1O75880 301 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 SORBS2O94875 1100 aaKnown RBP2.97□□□□□ -1.93
CBWD3-209ENST00000614377 C22orf31O95567 290 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 TRBC1P01850 177 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 SERPINA6P08185 405 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 ADRB1P08588 477 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 SUPT20HL2P0C7V6 817 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 LINC00614P0C842 121 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 AKR1A1P14550 325 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 ETS1P14921 441 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 EIF2AK2P19525 551 aaKnown RBP2.97□□□□□ -1.93
CBWD3-209ENST00000614377 ITIH2P19823 946 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 WARSP23381 471 aaKnown RBP2.97□□□□□ -1.93
CBWD3-209ENST00000614377 ABCD3P28288 659 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 FEN1P39748 380 aaKnown RBP2.97□□□□□ -1.93
CBWD3-209ENST00000614377 GPR4P46093 362 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 GNPDA1P46926 289 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 PPP3CCP48454 512 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 PIK3CGP48736 1102 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 FHITP49789 147 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 LIG4P49917 911 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 HK3P52790 923 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 PKNOX1P55347 436 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 EIF3BP55884 814 aaKnown RBP2.97□□□□□ -1.93
CBWD3-209ENST00000614377 ACTR2P61160 394 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 SOX4Q06945 474 aaPredicted RBP2.97□□□□□ -1.93
CBWD3-209ENST00000614377 TSPAN31Q12999 210 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 AIMP2Q13155 320 aaKnown RBP2.97□□□□□ -1.93
CBWD3-209ENST00000614377 DGKZQ13574 1117 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 TRAM2Q15035 370 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 CAMK4Q16566 473 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 DECR1Q16698 335 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 PPP1R3AQ16821 1122 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 KIZQ2M2Z5 673 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 AP5B1Q2VPB7 878 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 CHRFAM7AQ494W8 412 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 TMEM35AQ53FP2 167 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 ZRANB3Q5FWF4 1079 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 SCARA3Q6AZY7 606 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 POTEAQ6S8J7 498 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 MAMDC4Q6UXC1 1216 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 SCARA5Q6ZMJ2 495 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 RNF207Q6ZRF8 634 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 LINC00299Q6ZSB3 139 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 USP49Q70CQ1 688 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 TMC3Q7Z5M5 1100 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 PPP1R3BQ86XI6 285 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 PDSS2Q86YH6 399 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 PRSS58Q8IYP2 241 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 CADM2Q8N3J6 435 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 NETO2Q8NC67 525 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 PDPRQ8NCN5 879 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 SLC17A8Q8NDX2 589 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 OR4C15Q8NGM1 316 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 AKR7LQ8NHP1 331 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 DTX3LQ8TDB6 740 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 IGDCC4Q8TDY8 1250 aa2.97□□□□□ -1.93
CBWD3-209ENST00000614377 KCNE4Q8WWG9 221 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms