RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 TUBGCP3Q96CW5 907 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 PCDH12Q9NPG4 1184 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 AIG1Q9NVV5 245 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 CRNNQ9UBG3 495 aaPredicted RBP21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 HSPE1-MOB4S4R3N1 261 aa21.49■■□□□ 1.03
POLR2J3-220ENST00000613744 NOTCH4Q99466 2003 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 ASPDHA6ND91 283 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 CCDC154A6NI56 674 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 CLDN24A6NM45 220 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 RAD51BO15315 384 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 HOXC11O43248 304 aaPredicted RBP21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 MAN1A2O60476 641 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 ALX3O95076 343 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 PRR35P0CG20 571 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 TRPC1P48995 793 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 COPZ1P61923 177 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 SH3BP2P78314 561 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 SLC13A2Q13183 592 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 KCNAB2Q13303 367 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 EFL1Q7Z2Z2 1120 aaKnown RBP21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 Q8N9G6 341 aaPredicted RBP21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 SIMC1Q8NDZ2 872 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 SETD9Q8NE22 299 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 HTRA1Q92743 480 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 PABPC5Q96DU9 382 aaKnown RBP21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 TM9SF3Q9HD45 589 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 TMPRSS4Q9NRS4 437 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 POLG2Q9UHN1 485 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 BRWD1Q9NSI6 2320 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 CNTN5O94779 1100 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 ZDHHC11BP0C7U3 371 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 ZNF45Q02386 682 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 CATSPEREQ5SY80 951 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 RBM20Q5T481 1227 aaKnown RBP21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 RSBN1Q5VWQ0 802 aaPredicted RBP21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 TMEM236Q5W0B7 351 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 PNCKQ6P2M8 343 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 RNF135Q8IUD6 432 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 PEX5LQ8IYB4 626 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 DPP10Q8N608 796 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 MCFD2Q8NI22 146 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 POP5Q969H6 163 aaKnown RBP21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 RNF34Q969K3 372 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 CCDC115Q96NT0 180 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 FCRL5Q96RD9 977 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 BRINP2Q9C0B6 783 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 CCDC90BQ9GZT6 254 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 DUSP21Q9H596 190 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 KAT8Q9H7Z6 458 aaKnown RBP21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 ABCB10Q9NRK6 738 aa21.48■■□□□ 1.03
POLR2J3-220ENST00000613744 GOLGA8CPA6NN73 597 aa21.47■■□□□ 1.03
POLR2J3-220ENST00000613744 TLR5O60602 858 aa21.47■■□□□ 1.03
POLR2J3-220ENST00000613744 ITGAMP11215 1152 aa21.47■■□□□ 1.03
POLR2J3-220ENST00000613744 AGXTP21549 392 aa21.47■■□□□ 1.03
POLR2J3-220ENST00000613744 VBP1P61758 197 aa21.47■■□□□ 1.03
POLR2J3-220ENST00000613744 PIGFQ07326 219 aa21.47■■□□□ 1.03
POLR2J3-220ENST00000613744 TEAD2Q15562 447 aa21.47■■□□□ 1.03
POLR2J3-220ENST00000613744 PLEKHG6Q3KR16 790 aa21.47■■□□□ 1.03
POLR2J3-220ENST00000613744 C10orf120Q5SQS8 335 aa21.47■■□□□ 1.03
POLR2J3-220ENST00000613744 GPR149Q86SP6 731 aa21.47■■□□□ 1.03
POLR2J3-220ENST00000613744 PLD3Q8IV08 490 aa21.47■■□□□ 1.03
POLR2J3-220ENST00000613744 ASCC1Q8N9N2 400 aaKnown RBP21.47■■□□□ 1.03
POLR2J3-220ENST00000613744 TTC16Q8NEE8 873 aa21.47■■□□□ 1.03
POLR2J3-220ENST00000613744 PROX1Q92786 737 aa21.47■■□□□ 1.03
POLR2J3-220ENST00000613744 SLC22A12Q96S37 553 aa21.47■■□□□ 1.03
POLR2J3-220ENST00000613744 CCNB1IP1Q9NPC3 277 aa21.47■■□□□ 1.03
POLR2J3-220ENST00000613744 ZIM2Q9NZV7 527 aa21.47■■□□□ 1.03
POLR2J3-220ENST00000613744 TBC1D14Q9P2M4 693 aa21.47■■□□□ 1.03
POLR2J3-220ENST00000613744 ZNF221Q9UK13 617 aa21.47■■□□□ 1.03
POLR2J3-220ENST00000613744 PABPN1LA6NDY0 278 aaKnown RBP21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 MOSPD3O75425 235 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 PRKD3O94806 890 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 LRIG2O94898 1065 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 JCHAINP01591 159 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 KRT6AP02538 564 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 KRT6BP04259 564 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 OR4D2P58180 307 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 EFEMP1Q12805 493 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 CDK5R2Q13319 367 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 POU6F1Q14863 301 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 PAGE3Q5JUK9 113 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 AGAP6Q5VW22 663 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 STEAP3Q658P3 488 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 MIB1Q86YT6 1006 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 MCOLN3Q8TDD5 553 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 AGAP4Q96P64 663 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 RNF38Q9H0F5 515 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 S1PR5Q9H228 398 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 GORASP2Q9H8Y8 452 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 MID1IP1Q9NPA3 183 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 AGAP5A6NIR3 686 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 CCNKO75909 580 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 CYBBP04839 570 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 GGT1P19440 569 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 ZFP36L2P47974 494 aaKnown RBP21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 NKX2-5P52952 324 aaPredicted RBP21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 GEMP55040 296 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 FUT11Q495W5 492 aa21.46■■□□□ 1.03
POLR2J3-220ENST00000613744 HECTD2Q5U5R9 776 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms