RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 PRPF19Q9UMS4 504 aaKnown RBP10.64□□□□□ -0.71
FAM3A-221ENST00000612856 ERVW-1Q9UQF0 538 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 TCAF1Q9Y4C2 921 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 E7ENX8 843 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 MRASO14807 208 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 WNT9AO14904 365 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 OR1I1O60431 355 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 TSC22D2O75157 780 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 CCNKO75909 580 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 CRHR1P34998 444 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 SLC1A2P43004 574 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 SERPINB10P48595 397 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 AIF1P55008 147 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 CASP9P55211 416 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 PHC1P78364 1004 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 SMU1Q2TAY7 513 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 WDR81Q562E7 1941 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 PRRT3Q5FWE3 981 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 FAM78AQ5JUQ0 283 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 RBM20Q5T481 1227 aaKnown RBP10.63□□□□□ -0.71
FAM3A-221ENST00000612856 TSTD2Q5T7W7 516 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 MSANTD2Q6P1R3 559 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 PAQR3Q6TCH7 311 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 SLC22A16Q86VW1 577 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 CHFRQ96EP1 664 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 LMAN1LQ9HAT1 526 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 RCOR3Q9P2K3 495 aaPredicted RBP10.63□□□□□ -0.71
FAM3A-221ENST00000612856 IL36AQ9UHA7 158 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 PSAT1Q9Y617 370 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 COL6A6A6NMZ7 2263 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 ZSCAN5BA6NJL1 495 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 UBXN8O00124 270 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 EIF3FO00303 357 aaPredicted RBP10.63□□□□□ -0.71
FAM3A-221ENST00000612856 TRIM38O00635 465 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 B4GAT1O43505 415 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 PLIN3O60664 434 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 TSPAN9O75954 239 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 IDO1P14902 403 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 AP1S1P61966 158 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 PIGFQ07326 219 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 MGAT3Q09327 533 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 TOMM20Q15388 145 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 MOGQ16653 247 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 FRMD1Q8N878 549 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 CEP19Q96LK0 163 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 NEURL2Q9BR09 285 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 FBXO9Q9UK97 447 aaPredicted RBP10.63□□□□□ -0.71
FAM3A-221ENST00000612856 NOX1Q9Y5S8 564 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 H3BMQ9 156 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 HTRA2O43464 458 aaPredicted RBP10.63□□□□□ -0.71
FAM3A-221ENST00000612856 RFPL1O75677 317 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 KRT6AP02538 564 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 KRT6BP04259 564 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 KRT6CP48668 564 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 CCR4P51679 360 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 PLA2G16P53816 162 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 CLCQ05315 142 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 ELP6Q0PNE2 266 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 SERINC3Q13530 473 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 FASTKQ14296 549 aaKnown RBP10.63□□□□□ -0.71
FAM3A-221ENST00000612856 SMUG1Q53HV7 270 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 SLC8B1Q6J4K2 584 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 FAM171BQ6P995 826 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 ZNF621Q6ZSS3 439 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 PAGE2Q7Z2X7 111 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 RELL1Q8IUW5 271 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 TAGAPQ8N103 731 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 LMNTD1Q8N9Z9 388 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 OR7A2PQ8NGA2 310 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 RPLP0P6Q8NHW5 317 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 HLA-CQ95604 372 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 COG8Q96MW5 612 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 MTERF1Q99551 399 aaKnown RBP10.63□□□□□ -0.71
FAM3A-221ENST00000612856 CDH19Q9H159 772 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 XKR8Q9H6D3 395 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 WDR26Q9H7D7 661 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 MRPL40Q9NQ50 206 aaKnown RBP10.63□□□□□ -0.71
FAM3A-221ENST00000612856 CDH7Q9ULB5 785 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 PMF1-BGLAPU3KQ54 211 aa10.63□□□□□ -0.71
FAM3A-221ENST00000612856 IGLON5A6NGN9 336 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 RECQL5O94762 991 aaPredicted RBP10.62□□□□□ -0.71
FAM3A-221ENST00000612856 IDSP22304 550 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 RPIAP49247 311 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 CLDN2P57739 230 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 IRF9Q00978 393 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 DRICH1Q6PGQ1 229 aaPredicted RBP10.62□□□□□ -0.71
FAM3A-221ENST00000612856 SUSD1Q6UWL2 747 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 IGFN1Q86VF2 1251 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 RP9Q8TA86 221 aaKnown RBP10.62□□□□□ -0.71
FAM3A-221ENST00000612856 BRSK1Q8TDC3 778 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 ASZ1Q8WWH4 475 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 RNF145Q96MT1 663 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 RABL2AQ9UBK7 228 aaPredicted RBP10.62□□□□□ -0.71
FAM3A-221ENST00000612856 RNF11Q9Y3C5 154 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 CORINQ9Y5Q5 1042 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 ACADVLP49748 655 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 ZNF846Q147U1 533 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 TJAP1Q5JTD0 557 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 LCN9Q8WX39 176 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 WBP2Q969T9 261 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms