RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 RAB2BQ8WUD1 216 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 LZICQ8WZA0 190 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 PPP3R2Q96LZ3 170 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 OSBPL10Q9BXB5 764 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 NUDT4Q9NZJ9 180 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 Q9Y3F1 56 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 H0YAE9 185 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 H3BNC9 293 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 AREL1O15033 823 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 SEC14L2O76054 403 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 ABCB1P08183 1280 aaPredicted RBP13.74□□□□□ -0.21
COL6A1-207ENST00000612273 EPB42P16452 691 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 RGS4P49798 205 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 LAIR2Q6ISS4 152 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 ZDHHC21Q8IVQ6 265 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 ATG16L2Q8NAA4 619 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 TSPEARQ8WU66 669 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 TAMM41Q96BW9 452 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 HERC2P3Q9BVR0 1158 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 ZFYVE1Q9HBF4 777 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 HEBP1Q9NRV9 189 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 MBD1Q9UIS9 605 aaPredicted RBP13.74□□□□□ -0.21
COL6A1-207ENST00000612273 C3orf18Q9UK00 162 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 NEUROG3Q9Y4Z2 214 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 GREB1Q4ZG55 1949 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 DOCK4Q8N1I0 1966 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 A8MU76 341 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 NDUFS2O75306 463 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 CLDN11O75508 207 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 CD160O95971 181 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 COL6A1P12109 1028 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 IGFBP5P24593 272 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 BCAP31P51572 246 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 GP2P55259 537 aaKnown RBP13.74□□□□□ -0.21
COL6A1-207ENST00000612273 SMAD3P84022 425 aaKnown RBP13.74□□□□□ -0.21
COL6A1-207ENST00000612273 EMX1Q04741 257 aaPredicted RBP13.74□□□□□ -0.21
COL6A1-207ENST00000612273 SKIV2LQ15477 1246 aaKnown RBP13.74□□□□□ -0.21
COL6A1-207ENST00000612273 CARD16Q5EG05 197 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 HECTD3Q5T447 861 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 CYP4Z1Q86W10 505 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 MICU2Q8IYU8 434 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 RNF168Q8IYW5 571 aaPredicted RBP13.74□□□□□ -0.21
COL6A1-207ENST00000612273 LMNTD1Q8N9Z9 388 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 ZNF540Q8NDQ6 660 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 RORBQ92753 470 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 ELOVL6Q9H5J4 265 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 IL26Q9NPH9 171 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 ITM2CQ9NQX7 267 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 LRFN2Q9ULH4 789 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 VPS9D1Q9Y2B5 631 aa13.74□□□□□ -0.21
COL6A1-207ENST00000612273 MYO16Q9Y6X6 1858 aa13.73□□□□□ -0.21
COL6A1-207ENST00000612273 FAM92AA1XBS5 289 aa13.73□□□□□ -0.21
COL6A1-207ENST00000612273 TBKBP1A7MCY6 615 aa13.73□□□□□ -0.21
COL6A1-207ENST00000612273 SEPT4O43236 478 aa13.73□□□□□ -0.21
COL6A1-207ENST00000612273 IGLV3-27P01718 113 aa13.73□□□□□ -0.21
COL6A1-207ENST00000612273 CSKP41240 450 aa13.73□□□□□ -0.21
COL6A1-207ENST00000612273 AHSA2Q719I0 299 aa13.73□□□□□ -0.21
COL6A1-207ENST00000612273 APCDD1Q8J025 514 aa13.73□□□□□ -0.21
COL6A1-207ENST00000612273 DPP10Q8N608 796 aa13.73□□□□□ -0.21
COL6A1-207ENST00000612273 FOXJ1Q92949 421 aa13.73□□□□□ -0.21
COL6A1-207ENST00000612273 ASIC4Q96FT7 647 aa13.73□□□□□ -0.21
COL6A1-207ENST00000612273 MUC13Q9H3R2 512 aa13.73□□□□□ -0.21
COL6A1-207ENST00000612273 TNPO3Q9Y5L0 923 aaKnown RBP13.73□□□□□ -0.21
COL6A1-207ENST00000612273 KLK8O60259 260 aa13.73□□□□□ -0.21
COL6A1-207ENST00000612273 ADAM23O75077 832 aa13.73□□□□□ -0.21
COL6A1-207ENST00000612273 CBFA2T3O75081 653 aa13.73□□□□□ -0.21
COL6A1-207ENST00000612273 ADAMTS4O75173 837 aa13.73□□□□□ -0.21
COL6A1-207ENST00000612273 PDYNP01213 254 aa13.73□□□□□ -0.21
COL6A1-207ENST00000612273 TNFRSF1BP20333 461 aa13.73□□□□□ -0.21
COL6A1-207ENST00000612273 CYP4F2P78329 520 aa13.73□□□□□ -0.21
COL6A1-207ENST00000612273 CACNG1Q06432 222 aa13.73□□□□□ -0.21
COL6A1-207ENST00000612273 GPR17Q13304 367 aa13.73□□□□□ -0.21
COL6A1-207ENST00000612273 TMCO2Q7Z6W1 182 aaPredicted RBP13.73□□□□□ -0.21
COL6A1-207ENST00000612273 ADCK1Q86TW2 530 aa13.73□□□□□ -0.21
COL6A1-207ENST00000612273 DCP2Q8IU60 420 aaKnown RBP13.73□□□□□ -0.21
COL6A1-207ENST00000612273 ADHFE1Q8IWW8 467 aa13.73□□□□□ -0.21
COL6A1-207ENST00000612273 SOCS4Q8WXH5 440 aa13.73□□□□□ -0.21
COL6A1-207ENST00000612273 AUTS2Q8WXX7 1259 aa13.73□□□□□ -0.21
COL6A1-207ENST00000612273 PEX13Q92968 403 aa13.73□□□□□ -0.21
COL6A1-207ENST00000612273 MTERF1Q99551 399 aaKnown RBP13.73□□□□□ -0.21
COL6A1-207ENST00000612273 RBM4BQ9BQ04 359 aaKnown RBP13.73□□□□□ -0.21
COL6A1-207ENST00000612273 RBM4Q9BWF3 364 aaKnown RBP13.73□□□□□ -0.21
COL6A1-207ENST00000612273 KIF17Q9P2E2 1029 aa13.73□□□□□ -0.21
COL6A1-207ENST00000612273 MTRRQ9UBK8 725 aa13.73□□□□□ -0.21
COL6A1-207ENST00000612273 BLOC1S6Q9UL45 172 aa13.73□□□□□ -0.21
COL6A1-207ENST00000612273 PAIP2BQ9ULR5 123 aaKnown RBP13.73□□□□□ -0.21
COL6A1-207ENST00000612273 A0A1B0GVM2 712 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 IFRD1O00458 451 aaPredicted RBP13.72□□□□□ -0.21
COL6A1-207ENST00000612273 RFXANKO14593 260 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 CPNE6O95741 557 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 INHBBP09529 407 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 HALP42357 657 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 SEPHS1P49903 392 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 TMBIM6P55061 237 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 PPP2R2BQ00005 443 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 NPTX1Q15818 432 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 POM121L1PQ3SYA9 428 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 GOLM1Q8NBJ4 401 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 FBXO22Q8NEZ5 403 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 BCL7CQ8WUZ0 217 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms