RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 BAIAP2L1Q9UHR4 511 aa8.63□□□□□ -1.03
SMAD4-217ENST00000611848 ACSL5Q9ULC5 683 aa8.63□□□□□ -1.03
SMAD4-217ENST00000611848 DNAJC16Q9Y2G8 782 aa8.63□□□□□ -1.03
SMAD4-217ENST00000611848 KIR2DS5A0A0G2JLQ3 304 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 A0A0G2JNG1 304 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 A6NCN8 305 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 A8MUI8 341 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 KIR2DS3K7RE56 304 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 ZW10O43264 779 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 SGTAO43765 313 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 SNX2O60749 519 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 H2AFYO75367 372 aaKnown RBP8.62□□□□□ -1.03
SMAD4-217ENST00000611848 APOA4P06727 396 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 OR56A5P0C7T3 313 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 COL6A2P12110 1019 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 OGNP20774 298 aaKnown RBP8.62□□□□□ -1.03
SMAD4-217ENST00000611848 GMPRP36959 345 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 FASLGP48023 281 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 MNAT1P51948 309 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 ABCE1P61221 599 aaKnown RBP8.62□□□□□ -1.03
SMAD4-217ENST00000611848 IRF9Q00978 393 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 BIRC2Q13490 618 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 TUBB3Q13509 450 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 KIR2DS5Q14953 304 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 TBCCQ15814 346 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 CCDC157Q569K6 752 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 AGAP9Q5VTM2 703 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 ICE2Q659A1 982 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 NEPROQ6NW34 567 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 ABRAXAS1Q6UWZ7 409 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 ATG14Q6ZNE5 492 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 RAB44Q7Z6P3 723 aaPredicted RBP8.62□□□□□ -1.03
SMAD4-217ENST00000611848 SLC9B2Q86UD5 537 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 WDR75Q8IWA0 830 aaKnown RBP8.62□□□□□ -1.03
SMAD4-217ENST00000611848 LMNTD2Q8IXW0 634 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 SFRP1Q8N474 314 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 TMEM151AQ8N4L1 468 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 BEND7Q8N7W2 519 aaPredicted RBP8.62□□□□□ -1.03
SMAD4-217ENST00000611848 PNPLA1Q8N8W4 532 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 C2CD4AQ8NCU7 369 aaPredicted RBP8.62□□□□□ -1.03
SMAD4-217ENST00000611848 GPR150Q8NGU9 434 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 WDR48Q8TAF3 677 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 GABPB2Q8TAK5 448 aaPredicted RBP8.62□□□□□ -1.03
SMAD4-217ENST00000611848 CALML6Q8TD86 181 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 ATXN7L3BQ96GX2 97 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 TCF12Q99081 682 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 MIPEPQ99797 713 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 CAB39LQ9H9S4 337 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 NMRAL1Q9HBL8 299 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 PRDM8Q9NQV8 689 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.62□□□□□ -1.03
SMAD4-217ENST00000611848 LRIT1Q9P2V4 623 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 MID2Q9UJV3 735 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 VPS9D1Q9Y2B5 631 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 STK38LQ9Y2H1 464 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 RHPN2P1A8MT19 583 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 PDZK1P1A8MUH7 402 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 TMEM114B3SHH9 223 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 GOLGA8TH3BQL2 631 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 ZNF195O14628 629 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 PRMT5O14744 637 aaPredicted RBP8.62□□□□□ -1.03
SMAD4-217ENST00000611848 OR1I1O60431 355 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 NDUFS3O75489 264 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 LYPLA1O75608 230 aaPredicted RBP8.62□□□□□ -1.03
SMAD4-217ENST00000611848 EML2O95834 649 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 FTH1P02794 183 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 SERPINA6P08185 405 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 XRCC1P18887 633 aaPredicted RBP8.62□□□□□ -1.03
SMAD4-217ENST00000611848 CCND1P24385 295 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 PBLDP30039 288 aaPredicted RBP8.62□□□□□ -1.03
SMAD4-217ENST00000611848 ARRB2P32121 409 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 HALP42357 657 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 ABCG1P45844 678 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 GPR3P46089 330 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 PRKAA2P54646 552 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 MAZP56270 477 aaKnown RBP8.62□□□□□ -1.03
SMAD4-217ENST00000611848 FOXK2Q01167 660 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 PLOD1Q02809 727 aaPredicted RBP8.62□□□□□ -1.03
SMAD4-217ENST00000611848 THOC5Q13769 683 aaKnown RBP8.62□□□□□ -1.03
SMAD4-217ENST00000611848 NFE2L1Q14494 772 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 SEMA3AQ14563 771 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 NR1D2Q14995 579 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 TYSND1Q2T9J0 566 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 WASHC2DQ5SRD0 308 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 PERM1Q5SV97 790 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 WLSQ5T9L3 541 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 METRNLQ641Q3 311 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 DHRS13Q6UX07 377 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 KIAA0408Q6ZU52 694 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 GALNT7Q86SF2 657 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 TMPRSS12Q86WS5 348 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 SFTPA2Q8IWL1 248 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 CACTIN-AS1Q8N1I8 211 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 GALNT15Q8N3T1 639 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 CLDN19Q8N6F1 224 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 FAM13CQ8NE31 585 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 HM13Q8TCT9 377 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 SLC37A2Q8TED4 501 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 PPP4R1Q8TF05 950 aa8.62□□□□□ -1.03
SMAD4-217ENST00000611848 AGAP11Q8TF27 550 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 245.5 ms