RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 SLCO4A1Q96BD0 722 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 ZNF382Q96SR6 550 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 PTPN18Q99952 460 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 RTP3Q9BQQ7 232 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 EMILIN2Q9BXX0 1053 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 LHPPQ9H008 270 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 MIR1-1HGQ9H1L0 117 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 TUBB1Q9H4B7 451 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 DNAJC11Q9NVH1 559 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 ZNF451Q9Y4E5 1061 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 ILVBLA1L0T0 632 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 PDZK1P1A8MUH7 402 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 SAP18O00422 153 aaKnown RBP6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 TFECO14948 347 aaPredicted RBP6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 ZNF623O75123 536 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 EEDO75530 441 aaKnown RBP6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 INMTO95050 263 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 CYP11A1P05108 521 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 ANXA4P09525 319 aaPredicted RBP6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 ATXN1LP0C7T5 689 aaKnown RBP6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 ENGP17813 658 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 IFNA8P32881 189 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 HPCAL1P37235 193 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 CTSKP43235 329 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 BMXP51813 675 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 PRKAG1P54619 331 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 CDH12P55289 794 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 TPTEP56180 551 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 BTG3Q14201 252 aaPredicted RBP6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 SELPLGQ14242 412 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 TMEM236Q5W0B7 351 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 TMPRSS11BQ86T26 416 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 ZFAND4Q86XD8 727 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 SNX29P2Q8IUI4 249 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 SVOPLQ8N434 492 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 SH3RF2Q8TEC5 729 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 PHF10Q8WUB8 498 aaKnown RBP6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 AUTS2Q8WXX7 1259 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 MS4A4AQ96JQ5 239 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 KCNC2Q96PR1 638 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 SGK2Q9HBY8 427 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 ARNT2Q9HBZ2 717 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 ITM2CQ9NQX7 267 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 FNIP2Q9P278 1114 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 MAP4K5Q9Y4K4 846 aa6.72□□□□□ -1.33
SYNPO2-206ENST00000610556 KIAA1217Q5T5P2 1943 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 TRIP11Q15643 1979 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 A0A1B0GTL3 188 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 EFCAB10A6NFE3 127 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 ANKDD1BA6NHY2 528 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 MAGEB17A8MXT2 336 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 TARM1B6A8C7 271 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 TMX2-CTNND1H3BSU7 103 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 HAS3O00219 553 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 AIREO43918 545 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 GBAP04062 536 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 FUT4P22083 530 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 AZGP1P25311 298 aaKnown RBP6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 SLC11A1P49279 550 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 RCAN2Q14206 197 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 TCEA2Q15560 299 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 PTCHD3Q3KNS1 767 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 COLEC12Q5KU26 742 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 RBM48Q5RL73 367 aaKnown RBP6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 RGMBQ6NW40 437 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 CYP2U1Q7Z449 544 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 CLIP4Q8N3C7 705 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 GLB1L3Q8NCI6 653 aaPredicted RBP6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 MDGA1Q8NFP4 955 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 OR4A15Q8NGL6 344 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 S100ZQ8WXG8 99 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 TCF25Q9BQ70 676 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 CORO1BQ9BR76 489 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 COPS4Q9BT78 406 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 FUNDC2Q9BWH2 189 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 MRPL9Q9BYD2 267 aaKnown RBP6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 MAGEE1Q9HCI5 957 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 ERVK-18Q9QC07 812 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 HCSTQ9UBK5 93 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 CD300AQ9UGN4 299 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 PHIPQ8WWQ0 1821 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 CNTRLQ7Z7A1 2325 aa6.71□□□□□ -1.33
SYNPO2-206ENST00000610556 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 TRIM43BA6NCK2 446 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 TNFRSF11BO00300 401 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 MANBAO00462 879 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 SNPHO15079 494 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 AXIN1O15169 862 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 MATN4O95460 622 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 EOMESO95936 686 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 CCND3P30281 292 aaPredicted RBP6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 CD47Q08722 323 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 DMPKQ09013 629 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 PHKG1Q16816 387 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 SLC36A3Q495N2 470 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 CYP27C1Q4G0S4 372 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 OR2T5Q6IEZ7 315 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 SNX20Q7Z614 316 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 OR2T29Q8NH02 315 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 ZNF420Q8TAQ5 688 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms