RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 FADS2P1A8MWK0 482 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 CATP04040 527 aaKnown RBP11.66□□□□□ -0.54
USP6NL-206ENST00000609853 C7P10643 843 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 HOXB6P17509 224 aaKnown RBP11.66□□□□□ -0.54
USP6NL-206ENST00000609853 CASP2P42575 452 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 HNRNPFP52597 415 aaKnown RBP11.66□□□□□ -0.54
USP6NL-206ENST00000609853 PLOD1Q02809 727 aaPredicted RBP11.66□□□□□ -0.54
USP6NL-206ENST00000609853 GPM6BQ13491 265 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 ACOX1Q15067 660 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 PDGFRLQ15198 375 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 MAPKAPK3Q16644 382 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 HNRNPA1L2Q32P51 320 aaKnown RBP11.66□□□□□ -0.54
USP6NL-206ENST00000609853 SYTL3Q4VX76 610 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 TBCELQ5QJ74 424 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 INTS11Q5TA45 600 aaKnown RBP11.66□□□□□ -0.54
USP6NL-206ENST00000609853 PPP4R4Q6NUP7 873 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 UGT2A3Q6UWM9 527 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 MBOAT1Q6ZNC8 495 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 PARS2Q7L3T8 475 aaKnown RBP11.66□□□□□ -0.54
USP6NL-206ENST00000609853 SPPL2CQ8IUH8 684 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 VRK3Q8IV63 474 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 TBC1D21Q8IYX1 336 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 PAPD5Q8NDF8 572 aaKnown RBP11.66□□□□□ -0.54
USP6NL-206ENST00000609853 TRPV3Q8NET8 790 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 SELENOMQ8WWX9 145 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 SMARCD2Q92925 531 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 DTD2Q96FN9 168 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 PPP1R16AQ96I34 528 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 COQ10AQ96MF6 247 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 FOPNLQ96NB1 174 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 LRRC3BQ96PB8 259 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 TRAPPC9Q96Q05 1148 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 P2RY13Q9BPV8 354 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 CLMPQ9H6B4 373 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 THG1LQ9NWX6 298 aaKnown RBP11.66□□□□□ -0.54
USP6NL-206ENST00000609853 AP4B1Q9Y6B7 739 aa11.66□□□□□ -0.54
USP6NL-206ENST00000609853 KPNA3O00505 521 aaPredicted RBP11.65□□□□□ -0.54
USP6NL-206ENST00000609853 AKAP10O43572 662 aa11.65□□□□□ -0.54
USP6NL-206ENST00000609853 GMNNO75496 209 aa11.65□□□□□ -0.54
USP6NL-206ENST00000609853 JUPP14923 745 aa11.65□□□□□ -0.54
USP6NL-206ENST00000609853 CLDN8P56748 225 aa11.65□□□□□ -0.54
USP6NL-206ENST00000609853 CREB5Q02930 508 aa11.65□□□□□ -0.54
USP6NL-206ENST00000609853 TMEM115Q12893 351 aaPredicted RBP11.65□□□□□ -0.54
USP6NL-206ENST00000609853 ELAVL3Q14576 367 aaKnown RBP11.65□□□□□ -0.54
USP6NL-206ENST00000609853 CPSF6Q16630 551 aaKnown RBP eCLIP11.65□□□□□ -0.54
USP6NL-206ENST00000609853 USP39Q53GS9 565 aaKnown RBP11.65□□□□□ -0.54
USP6NL-206ENST00000609853 RABL3Q5HYI8 236 aa11.65□□□□□ -0.54
USP6NL-206ENST00000609853 SLC2A7Q6PXP3 512 aa11.65□□□□□ -0.54
USP6NL-206ENST00000609853 SERPINA13PQ6UXR4 307 aa11.65□□□□□ -0.54
USP6NL-206ENST00000609853 MSANTD1Q6ZTZ1 278 aa11.65□□□□□ -0.54
USP6NL-206ENST00000609853 ADGRG5Q8IZF4 528 aa11.65□□□□□ -0.54
USP6NL-206ENST00000609853 LIX1Q8N485 282 aa11.65□□□□□ -0.54
USP6NL-206ENST00000609853 FBXO15Q8NCQ5 510 aaPredicted RBP11.65□□□□□ -0.54
USP6NL-206ENST00000609853 SPDYE1Q8NFV5 336 aaPredicted RBP11.65□□□□□ -0.54
USP6NL-206ENST00000609853 CENPNQ96H22 339 aaPredicted RBP11.65□□□□□ -0.54
USP6NL-206ENST00000609853 ZNF514Q96K75 400 aaPredicted RBP11.65□□□□□ -0.54
USP6NL-206ENST00000609853 ASB16Q96NS5 453 aa11.65□□□□□ -0.54
USP6NL-206ENST00000609853 CCDC115Q96NT0 180 aa11.65□□□□□ -0.54
USP6NL-206ENST00000609853 HBEGFQ99075 208 aa11.65□□□□□ -0.54
USP6NL-206ENST00000609853 SFXN1Q9H9B4 322 aa11.65□□□□□ -0.54
USP6NL-206ENST00000609853 TRPV4Q9HBA0 871 aa11.65□□□□□ -0.54
USP6NL-206ENST00000609853 AGPAT4Q9NRZ5 378 aa11.65□□□□□ -0.54
USP6NL-206ENST00000609853 GDE1Q9NZC3 331 aa11.65□□□□□ -0.54
USP6NL-206ENST00000609853 EGFL7Q9UHF1 273 aa11.65□□□□□ -0.54
USP6NL-206ENST00000609853 MBD1Q9UIS9 605 aaPredicted RBP11.65□□□□□ -0.54
USP6NL-206ENST00000609853 ZFC3H1O60293 1989 aaKnown RBP11.65□□□□□ -0.54
USP6NL-206ENST00000609853 LAMA2P24043 3122 aaKnown RBP11.65□□□□□ -0.55
USP6NL-206ENST00000609853 DENND4AQ7Z401 1863 aa11.65□□□□□ -0.55
USP6NL-206ENST00000609853 SLC5A10A0PJK1 596 aa11.64□□□□□ -0.55
USP6NL-206ENST00000609853 PRMT3O60678 531 aa11.64□□□□□ -0.55
USP6NL-206ENST00000609853 ERN1O75460 977 aaKnown RBP11.64□□□□□ -0.55
USP6NL-206ENST00000609853 PDYNP01213 254 aa11.64□□□□□ -0.55
USP6NL-206ENST00000609853 PGRP06401 933 aa11.64□□□□□ -0.55
USP6NL-206ENST00000609853 LINGO3P0C6S8 592 aa11.64□□□□□ -0.55
USP6NL-206ENST00000609853 ZCCHC18P0CG32 403 aa11.64□□□□□ -0.55
USP6NL-206ENST00000609853 BCKDHAP12694 445 aa11.64□□□□□ -0.55
USP6NL-206ENST00000609853 HNF4AP41235 474 aa11.64□□□□□ -0.55
USP6NL-206ENST00000609853 ERVK-21P61565 698 aa11.64□□□□□ -0.55
USP6NL-206ENST00000609853 HMGCS1Q01581 520 aa11.64□□□□□ -0.55
USP6NL-206ENST00000609853 DPTQ07507 201 aa11.64□□□□□ -0.55
USP6NL-206ENST00000609853 CSTF3Q12996 717 aaKnown RBP11.64□□□□□ -0.55
USP6NL-206ENST00000609853 BCL7AQ4VC05 210 aa11.64□□□□□ -0.55
USP6NL-206ENST00000609853 FNDC3BQ53EP0 1204 aaKnown RBP11.64□□□□□ -0.55
USP6NL-206ENST00000609853 HABP4Q5JVS0 413 aaKnown RBP11.64□□□□□ -0.55
USP6NL-206ENST00000609853 FRG2Q64ET8 278 aa11.64□□□□□ -0.55
USP6NL-206ENST00000609853 NEK5Q6P3R8 708 aa11.64□□□□□ -0.55
USP6NL-206ENST00000609853 FBXL19Q6PCT2 694 aa11.64□□□□□ -0.55
USP6NL-206ENST00000609853 ZBTB49Q6ZSB9 765 aa11.64□□□□□ -0.55
USP6NL-206ENST00000609853 DSG4Q86SJ6 1040 aa11.64□□□□□ -0.55
USP6NL-206ENST00000609853 C7orf61Q8IZ16 206 aa11.64□□□□□ -0.55
USP6NL-206ENST00000609853 SLC22A15Q8IZD6 547 aa11.64□□□□□ -0.55
USP6NL-206ENST00000609853 RASGEF1AQ8N9B8 481 aa11.64□□□□□ -0.55
USP6NL-206ENST00000609853 CSGALNACT1Q8TDX6 532 aa11.64□□□□□ -0.55
USP6NL-206ENST00000609853 MYLIPQ8WY64 445 aa11.64□□□□□ -0.55
USP6NL-206ENST00000609853 GTF2H4Q92759 462 aa11.64□□□□□ -0.55
USP6NL-206ENST00000609853 GBP5Q96PP8 586 aa11.64□□□□□ -0.55
USP6NL-206ENST00000609853 FRG2BQ96QU4 278 aa11.64□□□□□ -0.55
USP6NL-206ENST00000609853 C9orf16Q9BUW7 83 aa11.64□□□□□ -0.55
USP6NL-206ENST00000609853 ACPTQ9BZG2 426 aa11.64□□□□□ -0.55
USP6NL-206ENST00000609853 RMND5AQ9H871 391 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms