RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 ACSS3Q9H6R3 686 aa11.89□□□□□ -0.51
HLA-F-230ENST00000606273 AKIRIN1Q9H9L7 192 aaPredicted RBP11.89□□□□□ -0.51
HLA-F-230ENST00000606273 PHPT1Q9NRX4 125 aaPredicted RBP11.89□□□□□ -0.51
HLA-F-230ENST00000606273 RPL26L1Q9UNX3 145 aaKnown RBP11.89□□□□□ -0.51
HLA-F-230ENST00000606273 SHOC2Q9UQ13 582 aa11.89□□□□□ -0.51
HLA-F-230ENST00000606273 SLC17A4Q9Y2C5 497 aa11.89□□□□□ -0.51
HLA-F-230ENST00000606273 NEU2Q9Y3R4 380 aa11.89□□□□□ -0.51
HLA-F-230ENST00000606273 FBN3Q75N90 2809 aa11.88□□□□□ -0.51
HLA-F-230ENST00000606273 ZG16O60844 167 aa11.88□□□□□ -0.51
HLA-F-230ENST00000606273 PHF2O75151 1096 aa11.88□□□□□ -0.51
HLA-F-230ENST00000606273 MT-ND3P03897 115 aa11.88□□□□□ -0.51
HLA-F-230ENST00000606273 ELFN1P0C7U0 828 aa11.88□□□□□ -0.51
HLA-F-230ENST00000606273 FGF5P12034 268 aa11.88□□□□□ -0.51
HLA-F-230ENST00000606273 PTPN4P29074 926 aa11.88□□□□□ -0.51
HLA-F-230ENST00000606273 GRIA1P42261 906 aa11.88□□□□□ -0.51
HLA-F-230ENST00000606273 GEMP55040 296 aa11.88□□□□□ -0.51
HLA-F-230ENST00000606273 PER3P56645 1201 aa11.88□□□□□ -0.51
HLA-F-230ENST00000606273 RPS18P62269 152 aaKnown RBP11.88□□□□□ -0.51
HLA-F-230ENST00000606273 HHEXQ03014 270 aa11.88□□□□□ -0.51
HLA-F-230ENST00000606273 NFATC2Q13469 925 aa11.88□□□□□ -0.51
HLA-F-230ENST00000606273 ACOX1Q15067 660 aa11.88□□□□□ -0.51
HLA-F-230ENST00000606273 CRB2Q5IJ48 1285 aa11.88□□□□□ -0.51
HLA-F-230ENST00000606273 CCDC137Q6PK04 289 aaKnown RBP11.88□□□□□ -0.51
HLA-F-230ENST00000606273 GDF7Q7Z4P5 450 aa11.88□□□□□ -0.51
HLA-F-230ENST00000606273 TECPR1Q7Z6L1 1165 aa11.88□□□□□ -0.51
HLA-F-230ENST00000606273 SYVN1Q86TM6 617 aa11.88□□□□□ -0.51
HLA-F-230ENST00000606273 FERMT1Q9BQL6 677 aa11.88□□□□□ -0.51
HLA-F-230ENST00000606273 ADGRE3Q9BY15 652 aa11.88□□□□□ -0.51
HLA-F-230ENST00000606273 DDX47Q9H0S4 455 aaKnown RBP11.88□□□□□ -0.51
HLA-F-230ENST00000606273 SARS2Q9NP81 518 aaKnown RBP11.88□□□□□ -0.51
HLA-F-230ENST00000606273 PIH1D1Q9NWS0 290 aaKnown RBP11.88□□□□□ -0.51
HLA-F-230ENST00000606273 CD84Q9UIB8 345 aa11.88□□□□□ -0.51
HLA-F-230ENST00000606273 LNPEPQ9UIQ6 1025 aa11.88□□□□□ -0.51
HLA-F-230ENST00000606273 ZNF711Q9Y462 761 aa11.88□□□□□ -0.51
HLA-F-230ENST00000606273 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.87□□□□□ -0.51
HLA-F-230ENST00000606273 C1orf232A0A0U1RR37 186 aa11.87□□□□□ -0.51
HLA-F-230ENST00000606273 BUD23O43709 281 aaKnown RBP11.87□□□□□ -0.51
HLA-F-230ENST00000606273 ANXA9O76027 345 aa11.87□□□□□ -0.51
HLA-F-230ENST00000606273 EPOP01588 193 aa11.87□□□□□ -0.51
HLA-F-230ENST00000606273 IVLP07476 585 aa11.87□□□□□ -0.51
HLA-F-230ENST00000606273 CYP2A6P11509 494 aaPredicted RBP11.87□□□□□ -0.51
HLA-F-230ENST00000606273 LPOP22079 712 aaPredicted RBP11.87□□□□□ -0.51
HLA-F-230ENST00000606273 CA4P22748 312 aa11.87□□□□□ -0.51
HLA-F-230ENST00000606273 MAPK9P45984 424 aa11.87□□□□□ -0.51
HLA-F-230ENST00000606273 STC1P52823 247 aa11.87□□□□□ -0.51
HLA-F-230ENST00000606273 TERF1P54274 439 aa11.87□□□□□ -0.51
HLA-F-230ENST00000606273 CDK3Q00526 305 aa11.87□□□□□ -0.51
HLA-F-230ENST00000606273 IL10RAQ13651 578 aa11.87□□□□□ -0.51
HLA-F-230ENST00000606273 LAMB3Q13751 1172 aa11.87□□□□□ -0.51
HLA-F-230ENST00000606273 PRPSAP1Q14558 356 aa11.87□□□□□ -0.51
HLA-F-230ENST00000606273 PTPRCAPQ14761 206 aa11.87□□□□□ -0.51
HLA-F-230ENST00000606273 FAM199XQ6PEV8 388 aaPredicted RBP11.87□□□□□ -0.51
HLA-F-230ENST00000606273 TMC3Q7Z5M5 1100 aa11.87□□□□□ -0.51
HLA-F-230ENST00000606273 PLXDC1Q8IUK5 500 aa11.87□□□□□ -0.51
HLA-F-230ENST00000606273 TTC30BQ8N4P2 665 aa11.87□□□□□ -0.51
HLA-F-230ENST00000606273 CCDC89Q8N998 374 aa11.87□□□□□ -0.51
HLA-F-230ENST00000606273 SCAMP4Q969E2 229 aa11.87□□□□□ -0.51
HLA-F-230ENST00000606273 SH3KBP1Q96B97 665 aa11.87□□□□□ -0.51
HLA-F-230ENST00000606273 DTD2Q96FN9 168 aa11.87□□□□□ -0.51
HLA-F-230ENST00000606273 C9orf72Q96LT7 481 aa11.87□□□□□ -0.51
HLA-F-230ENST00000606273 AGAP2Q99490 1192 aa11.87□□□□□ -0.51
HLA-F-230ENST00000606273 SMAD5Q99717 465 aaKnown RBP11.87□□□□□ -0.51
HLA-F-230ENST00000606273 TBL1YQ9BQ87 522 aa11.87□□□□□ -0.51
HLA-F-230ENST00000606273 AAR2Q9Y312 384 aaKnown RBP11.87□□□□□ -0.51
HLA-F-230ENST00000606273 COPG1Q9Y678 874 aaKnown RBP11.87□□□□□ -0.51
HLA-F-230ENST00000606273 CROCCQ5TZA2 2017 aa11.86□□□□□ -0.51
HLA-F-230ENST00000606273 TCRBV7S3A2A0A539 114 aa11.86□□□□□ -0.51
HLA-F-230ENST00000606273 A6NL46 340 aa11.86□□□□□ -0.51
HLA-F-230ENST00000606273 ZNF189O75820 626 aaPredicted RBP11.86□□□□□ -0.51
HLA-F-230ENST00000606273 AP2A1O95782 977 aa11.86□□□□□ -0.51
HLA-F-230ENST00000606273 SOD1P00441 154 aa11.86□□□□□ -0.51
HLA-F-230ENST00000606273 KRT14P02533 472 aa11.86□□□□□ -0.51
HLA-F-230ENST00000606273 SLC4A1P02730 911 aa11.86□□□□□ -0.51
HLA-F-230ENST00000606273 C9P02748 559 aa11.86□□□□□ -0.51
HLA-F-230ENST00000606273 TPH1P17752 444 aa11.86□□□□□ -0.51
HLA-F-230ENST00000606273 PTGER4P35408 488 aa11.86□□□□□ -0.51
HLA-F-230ENST00000606273 VPS41P49754 854 aa11.86□□□□□ -0.51
HLA-F-230ENST00000606273 RPS15P62841 145 aaKnown RBP11.86□□□□□ -0.51
HLA-F-230ENST00000606273 MRPS25P82663 173 aaKnown RBP11.86□□□□□ -0.51
HLA-F-230ENST00000606273 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.86□□□□□ -0.51
HLA-F-230ENST00000606273 PYCR3Q53H96 274 aa11.86□□□□□ -0.51
HLA-F-230ENST00000606273 IYDQ6PHW0 289 aa11.86□□□□□ -0.51
HLA-F-230ENST00000606273 GSTA5Q7RTV2 222 aa11.86□□□□□ -0.51
HLA-F-230ENST00000606273 KLHL7Q8IXQ5 586 aa11.86□□□□□ -0.51
HLA-F-230ENST00000606273 NDUFAF2Q8N183 169 aa11.86□□□□□ -0.51
HLA-F-230ENST00000606273 ST6GALNAC3Q8NDV1 305 aa11.86□□□□□ -0.51
HLA-F-230ENST00000606273 NUS1Q96E22 293 aa11.86□□□□□ -0.51
HLA-F-230ENST00000606273 NAP1L3Q99457 506 aaPredicted RBP11.86□□□□□ -0.51
HLA-F-230ENST00000606273 TBC1D10AQ9BXI6 508 aa11.86□□□□□ -0.51
HLA-F-230ENST00000606273 FSD1LQ9BXM9 530 aa11.86□□□□□ -0.51
HLA-F-230ENST00000606273 ABCG8Q9H221 673 aa11.86□□□□□ -0.51
HLA-F-230ENST00000606273 MAGEE1Q9HCI5 957 aa11.86□□□□□ -0.51
HLA-F-230ENST00000606273 HOMER3Q9NSC5 361 aa11.86□□□□□ -0.51
HLA-F-230ENST00000606273 PAK5Q9P286 719 aa11.86□□□□□ -0.51
HLA-F-230ENST00000606273 COPG2Q9UBF2 871 aa11.86□□□□□ -0.51
HLA-F-230ENST00000606273 G3BP2Q9UN86 482 aaKnown RBP11.86□□□□□ -0.51
HLA-F-230ENST00000606273 B3GNT3Q9Y2A9 372 aa11.86□□□□□ -0.51
HLA-F-230ENST00000606273 PRRC2CQ9Y520 2896 aaKnown RBP11.86□□□□□ -0.51
HLA-F-230ENST00000606273 MN1Q10571 1320 aaPredicted RBP11.86□□□□□ -0.51
HLA-F-230ENST00000606273 PSMD11O00231 422 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms