RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 PRMT6Q96LA8 375 aaPredicted RBP3.83□□□□□ -1.8
IGHV3-29-201ENST00000604817 ZNF560Q96MR9 790 aa3.83□□□□□ -1.8
IGHV3-29-201ENST00000604817 GUCD1Q96NT3 240 aa3.83□□□□□ -1.8
IGHV3-29-201ENST00000604817 SLITRK1Q96PX8 696 aa3.83□□□□□ -1.8
IGHV3-29-201ENST00000604817 PRRX2Q99811 253 aa3.83□□□□□ -1.8
IGHV3-29-201ENST00000604817 SEMA3CQ99985 751 aa3.83□□□□□ -1.8
IGHV3-29-201ENST00000604817 S1PR5Q9H228 398 aa3.83□□□□□ -1.8
IGHV3-29-201ENST00000604817 CHMP4BQ9H444 224 aaKnown RBP3.83□□□□□ -1.8
IGHV3-29-201ENST00000604817 AKIRIN1Q9H9L7 192 aaPredicted RBP3.83□□□□□ -1.8
IGHV3-29-201ENST00000604817 DDX4Q9NQI0 724 aaKnown RBP3.83□□□□□ -1.8
IGHV3-29-201ENST00000604817 FAM212BQ9NTI7 297 aaPredicted RBP3.83□□□□□ -1.8
IGHV3-29-201ENST00000604817 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.83□□□□□ -1.8
IGHV3-29-201ENST00000604817 COX16Q9P0S2 106 aa3.83□□□□□ -1.8
IGHV3-29-201ENST00000604817 TRIM10Q9UDY6 481 aa3.83□□□□□ -1.8
IGHV3-29-201ENST00000604817 SLC24A2Q9UI40 661 aa3.83□□□□□ -1.8
IGHV3-29-201ENST00000604817 FBXO4Q9UKT5 387 aa3.83□□□□□ -1.8
IGHV3-29-201ENST00000604817 AMFRQ9UKV5 643 aa3.83□□□□□ -1.8
IGHV3-29-201ENST00000604817 SMC3Q9UQE7 1217 aa3.83□□□□□ -1.8
IGHV3-29-201ENST00000604817 SH2B3Q9UQQ2 575 aa3.83□□□□□ -1.8
IGHV3-29-201ENST00000604817 CLIC4Q9Y696 253 aa3.83□□□□□ -1.8
IGHV3-29-201ENST00000604817 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.83□□□□□ -1.8
IGHV3-29-201ENST00000604817 ZNF804BA4D1E1 1349 aa3.83□□□□□ -1.8
IGHV3-29-201ENST00000604817 ECM29Q5VYK3 1845 aa3.83□□□□□ -1.8
IGHV3-29-201ENST00000604817 MGAMO43451 1857 aa3.83□□□□□ -1.8
IGHV3-29-201ENST00000604817 DLG5Q8TDM6 1919 aa3.83□□□□□ -1.8
IGHV3-29-201ENST00000604817 ALPK3Q96L96 1907 aa3.83□□□□□ -1.8
IGHV3-29-201ENST00000604817 COL3A1P02461 1466 aaPredicted RBP3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 MED23Q9ULK4 1368 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 A0A0B4J203 849 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 TRBV2A0A0J9YWF9 115 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 C2orf92A0A1B0GVN3 265 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 A0A1B0GWJ7 208 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 TMEM200CA6NKL6 621 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 HSPB2A8KAH6 182 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 SGK1O00141 431 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 ATP2A1O14983 1001 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 KLK8O60259 260 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 MOCS3O95396 460 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 PRAMEF12O95522 483 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 CXCL14O95715 111 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 LCATP04180 440 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 AREGP15514 252 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 DNAJB1P25685 340 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 HOXD9P28356 352 aaPredicted RBP3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 EPHB2P29323 1055 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 SOX6P35712 828 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 ATP5OP48047 213 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 CENPAP49450 140 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 HTR6P50406 440 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 SERPINH1P50454 418 aaKnown RBP3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 DGCR2P98153 550 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 GUCY1B3Q02153 619 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 CFHR3Q02985 330 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 WDR43Q15061 677 aaKnown RBP eCLIP3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 CEBPEQ15744 281 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 HSPB2Q16082 182 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 TCTN1Q2MV58 587 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 ERCC6LQ2NKX8 1250 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 IQCCQ4KMZ1 466 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 TIGD2Q4W5G0 525 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 EPC2Q52LR7 807 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 TXNRD3NBQ6F5E7 133 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 PODNL1Q6PEZ8 512 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 FIP1L1Q6UN15 594 aaKnown RBP3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 KIRREL2Q6UWL6 708 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 ZYG11AQ6WRX3 759 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 Q6ZWC4 215 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 PRSS42Q7Z5A4 293 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 MRGPRGQ86SM5 289 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 EXOC3L1Q86VI1 746 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 AMZ2Q86W34 360 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 ERO1BQ86YB8 467 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 PM20D2Q8IYS1 436 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 LINC01465Q8N7H1 131 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 BANPQ8N9N5 519 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 B3GALNT2Q8NCR0 500 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 CCNYQ8ND76 341 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 HUS1BQ8NHY5 278 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 NCOA7Q8NI08 942 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 CAGE1Q8TC20 777 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 LPIN2Q92539 896 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 ZNF75CPQ92670 426 aaPredicted RBP3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 RAD54LQ92698 747 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 SLAMF9Q96A28 289 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 SLC41A2Q96JW4 573 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 MUS81Q96NY9 551 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 DEFB118Q96PH6 123 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 CDX2Q99626 313 aaPredicted RBP3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 OLFM1Q99784 485 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 ADAM2Q99965 735 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 FAM110AQ9BQ89 295 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 ZPBPQ9BS86 351 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 ZNF577Q9BSK1 485 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 ALG8Q9BVK2 526 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 GATA5Q9BWX5 397 aaPredicted RBP3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 MOV10L1Q9BXT6 1211 aaKnown RBP3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 NCOR1P1Q9H4R4 102 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 SRD5A3Q9H8P0 318 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 SLC28A3Q9HAS3 691 aa3.82□□□□□ -1.8
IGHV3-29-201ENST00000604817 BPIFA1Q9NP55 256 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms