RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 IFRD1O00458 451 aaPredicted RBP11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 MANBAO00462 879 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 NOL3O60936 208 aaKnown RBP11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 EEDO75530 441 aaKnown RBP11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 RHOP08100 348 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 PRKACGP22612 351 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 PPM1AP35813 382 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 PHEXP78562 749 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 IRF8Q02556 426 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 CHRNB3Q05901 458 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 CHIT1Q13231 466 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 NAE1Q13564 534 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 GTF2H3Q13889 308 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 ANKRD34AQ69YU3 496 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 SULT1C3Q6IMI6 304 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 ENPP6Q6UWR7 440 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 ZNF783Q6ZMS7 281 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 EPHX4Q8IUS5 362 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 P2RY13Q9BPV8 354 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 LRRC3Q9BY71 257 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 PTBP2Q9UKA9 531 aaKnown RBP11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 ZFC3H1O60293 1989 aaKnown RBP11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 MYO1GB0I1T2 1018 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 SAP18O00422 153 aaKnown RBP11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 DIRAS1O95057 198 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 POP4O95707 220 aaKnown RBP11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 PGRP06401 933 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 C1SP09871 688 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 AQP1P29972 269 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 IRS1P35568 1242 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 MAPK8P45983 427 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 GSSP48637 474 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 METAP1P53582 386 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 EMX2Q04743 252 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 AASDHQ4L235 1098 aaPredicted RBP11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 XKR6Q5GH73 641 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 TCEAL5Q5H9L2 206 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 OGFOD2Q6N063 350 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 TMC5Q6UXY8 1006 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 HTR3DQ70Z44 454 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 PARP8Q8N3A8 854 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 TRPV3Q8NET8 790 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 POF1BQ8WVV4 589 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 ACAT2Q9BWD1 397 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 FADS3Q9Y5Q0 445 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 B4GAT1O43505 415 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 TLL1O43897 1013 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 SOCS5O75159 536 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 C1QCP02747 245 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 S100A3P33764 101 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 VIPR2P41587 438 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 BDKRB1P46663 353 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 GRIN2CQ14957 1233 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 PCBP2Q15366 365 aaKnown RBP eCLIP11.26□□□□□ -0.612e-8■■■■■ 84.1
ARHGEF1-220ENST00000600274 CCSMST1Q4G0I0 132 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 ADNP2Q6IQ32 1131 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 DOK6Q6PKX4 331 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 SPESP1Q6UW49 350 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 ZNF621Q6ZSS3 439 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 TMC8Q8IU68 726 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 TICAM1Q8IUC6 712 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 IRF7Q92985 503 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 FAM120BQ96EK7 910 aaKnown RBP11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 CENPNQ96H22 339 aaPredicted RBP11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 HAUS8Q9BT25 410 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 INPP5KQ9BT40 448 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 ZIM2Q9NZV7 527 aa11.26□□□□□ -0.61
ARHGEF1-220ENST00000600274 PRUNE2Q8WUY3 3088 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 EYSQ5T1H1 3165 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 ANTXRLA6NF34 631 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 AQP12BA6NM10 295 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 CFAP99D6REC4 459 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 BOLA2-SMG1P6H3BVE0 249 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 CTSAP10619 480 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 BCKDHAP12694 445 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 HRH2P25021 359 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 SH3BGRP55822 239 aaPredicted RBP11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 VAC14Q08AM6 782 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 SPIDRQ14159 915 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 PDCD4Q53EL6 469 aaKnown RBP11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 LDLRAP1Q5SW96 308 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 OR4F3Q6IEY1 312 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 TBPL2Q6SJ96 375 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 HACD2Q6Y1H2 254 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 TRAPPC5Q8IUR0 188 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 AQP12AQ8IXF9 295 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 MCOLN3Q8TDD5 553 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 SDCCAG3Q96C92 435 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 C9orf16Q9BUW7 83 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 ACPTQ9BZG2 426 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 SMURF2Q9HAU4 748 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 SLC6A13Q9NSD5 602 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 NDUFA13Q9P0J0 144 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 RBMX2Q9Y388 322 aaKnown RBP11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 SCAMP1O15126 338 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 TSPAN6O43657 245 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 KLK8O60259 260 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 ALBP02768 609 aa11.25□□□□□ -0.61
ARHGEF1-220ENST00000600274 HSD17B1P14061 328 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms