RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 LINC01555Q8NAE3 123 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 KCNE4Q8WWG9 221 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 ELMO2Q96JJ3 720 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 FOPNLQ96NB1 174 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 OR2A14Q96R47 310 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 OR6C1Q96RD1 312 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 DDA1Q9BW61 102 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 FBXO8Q9NRD0 319 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 KLHL42Q9P2K6 505 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 PCDHGA3Q9Y5H0 932 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 MAP1BP46821 2468 aaKnown RBP14.73□□□□□ -0.05
LIG1-219ENST00000600055 ARHGEF33A8MVX0 844 aa14.72□□□□□ -0.05
LIG1-219ENST00000600055 MATN2O00339 956 aa14.72□□□□□ -0.05
LIG1-219ENST00000600055 POLR1CO15160 346 aaPredicted RBP14.72□□□□□ -0.05
LIG1-219ENST00000600055 RRP8O43159 456 aaKnown RBP14.72□□□□□ -0.05
LIG1-219ENST00000600055 ST6GAL1P15907 406 aa14.72□□□□□ -0.05
LIG1-219ENST00000600055 UGT2B7P16662 529 aa14.72□□□□□ -0.05
LIG1-219ENST00000600055 RAB28P51157 221 aa14.72□□□□□ -0.05
LIG1-219ENST00000600055 RAB15P59190 212 aa14.72□□□□□ -0.05
LIG1-219ENST00000600055 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.72□□□□□ -0.05
LIG1-219ENST00000600055 HECTD2Q5U5R9 776 aa14.72□□□□□ -0.05
LIG1-219ENST00000600055 TTC23LQ6PF05 361 aa14.72□□□□□ -0.05
LIG1-219ENST00000600055 PAQR3Q6TCH7 311 aa14.72□□□□□ -0.05
LIG1-219ENST00000600055 SPESP1Q6UW49 350 aa14.72□□□□□ -0.05
LIG1-219ENST00000600055 C3orf62Q6ZUJ4 267 aa14.72□□□□□ -0.05
LIG1-219ENST00000600055 PIWIL4Q7Z3Z4 852 aaKnown RBP14.72□□□□□ -0.05
LIG1-219ENST00000600055 SPACA3Q8IXA5 215 aa14.72□□□□□ -0.05
LIG1-219ENST00000600055 FAM20CQ8IXL6 584 aa14.72□□□□□ -0.05
LIG1-219ENST00000600055 LRRN4CLQ8ND94 238 aa14.72□□□□□ -0.05
LIG1-219ENST00000600055 FLVCR1-AS1Q8TAF5 88 aa14.72□□□□□ -0.05
LIG1-219ENST00000600055 RAD51AP1Q96B01 352 aa14.72□□□□□ -0.05
LIG1-219ENST00000600055 OLFM1Q99784 485 aa14.72□□□□□ -0.05
LIG1-219ENST00000600055 PHACTR1Q9C0D0 580 aa14.72□□□□□ -0.05
LIG1-219ENST00000600055 B3GNT4Q9C0J1 378 aa14.72□□□□□ -0.05
LIG1-219ENST00000600055 TWSG1Q9GZX9 223 aa14.72□□□□□ -0.05
LIG1-219ENST00000600055 FAM114A2Q9NRY5 505 aa14.72□□□□□ -0.05
LIG1-219ENST00000600055 C1GALT1Q9NS00 363 aa14.72□□□□□ -0.05
LIG1-219ENST00000600055 WDR70Q9NW82 654 aa14.72□□□□□ -0.05
LIG1-219ENST00000600055 TAS2R13Q9NYV9 303 aa14.72□□□□□ -0.05
LIG1-219ENST00000600055 OR6C2Q9NZP2 312 aa14.72□□□□□ -0.05
LIG1-219ENST00000600055 TRMT6Q9UJA5 497 aaKnown RBP14.72□□□□□ -0.05
LIG1-219ENST00000600055 ACSL6Q9UKU0 697 aa14.72□□□□□ -0.05
LIG1-219ENST00000600055 SLC39A10Q9ULF5 831 aa14.72□□□□□ -0.05
LIG1-219ENST00000600055 TCRBV9S1A1TA0A576 114 aa14.71□□□□□ -0.05
LIG1-219ENST00000600055 ISM1B1AKI9 464 aa14.71□□□□□ -0.05
LIG1-219ENST00000600055 RASGRF2O14827 1237 aa14.71□□□□□ -0.05
LIG1-219ENST00000600055 KLK10O43240 276 aa14.71□□□□□ -0.05
LIG1-219ENST00000600055 KDM1AO60341 852 aa14.71□□□□□ -0.05
LIG1-219ENST00000600055 PSIP1O75475 530 aaKnown RBP14.71□□□□□ -0.05
LIG1-219ENST00000600055 ZBTB11O95625 1053 aaPredicted RBP14.71□□□□□ -0.05
LIG1-219ENST00000600055 MPC1LP0DKB6 136 aa14.71□□□□□ -0.05
LIG1-219ENST00000600055 ARL4DP49703 201 aa14.71□□□□□ -0.05
LIG1-219ENST00000600055 HSD11B2P80365 405 aa14.71□□□□□ -0.05
LIG1-219ENST00000600055 CLN3Q13286 438 aa14.71□□□□□ -0.05
LIG1-219ENST00000600055 GLE1Q53GS7 698 aaKnown RBP14.71□□□□□ -0.05
LIG1-219ENST00000600055 UGT3A1Q6NUS8 523 aa14.71□□□□□ -0.05
LIG1-219ENST00000600055 CEACAM20Q6UY09 585 aa14.71□□□□□ -0.05
LIG1-219ENST00000600055 LRRC69Q6ZNQ3 347 aa14.71□□□□□ -0.05
LIG1-219ENST00000600055 NEK10Q6ZWH5 1172 aa14.71□□□□□ -0.05
LIG1-219ENST00000600055 SLC26A11Q86WA9 606 aa14.71□□□□□ -0.05
LIG1-219ENST00000600055 ZC3HC1Q86WB0 502 aaKnown RBP14.71□□□□□ -0.05
LIG1-219ENST00000600055 KMT5CQ86Y97 462 aa14.71□□□□□ -0.05
LIG1-219ENST00000600055 D2HGDHQ8N465 521 aa14.71□□□□□ -0.05
LIG1-219ENST00000600055 OR2L8Q8NGY9 312 aa14.71□□□□□ -0.05
LIG1-219ENST00000600055 DENND1AQ8TEH3 1009 aa14.71□□□□□ -0.05
LIG1-219ENST00000600055 EEF1AKMT1Q8WVE0 214 aa14.71□□□□□ -0.05
LIG1-219ENST00000600055 IFT81Q8WYA0 676 aa14.71□□□□□ -0.05
LIG1-219ENST00000600055 CRELD1Q96HD1 420 aa14.71□□□□□ -0.05
LIG1-219ENST00000600055 TRAPPC9Q96Q05 1148 aa14.71□□□□□ -0.05
LIG1-219ENST00000600055 PITPNM3Q9BZ71 974 aa14.71□□□□□ -0.05
LIG1-219ENST00000600055 ASPSCR1Q9BZE9 553 aa14.71□□□□□ -0.05
LIG1-219ENST00000600055 LRRC4CQ9HCJ2 640 aa14.71□□□□□ -0.05
LIG1-219ENST00000600055 SOHLH2Q9NX45 425 aa14.71□□□□□ -0.05
LIG1-219ENST00000600055 VWA7Q9Y334 891 aa14.71□□□□□ -0.05
LIG1-219ENST00000600055 APC2O95996 2303 aa14.7□□□□□ -0.06
LIG1-219ENST00000600055 ESPNB1AK53 854 aa14.7□□□□□ -0.06
LIG1-219ENST00000600055 C1QAP02745 245 aa14.7□□□□□ -0.06
LIG1-219ENST00000600055 CBSLP0DN79 551 aa14.7□□□□□ -0.06
LIG1-219ENST00000600055 ENO3P13929 434 aaPredicted RBP14.7□□□□□ -0.06
LIG1-219ENST00000600055 ZNF28P17035 718 aa14.7□□□□□ -0.06
LIG1-219ENST00000600055 SAT1P21673 171 aa14.7□□□□□ -0.06
LIG1-219ENST00000600055 CD9P21926 228 aa14.7□□□□□ -0.06
LIG1-219ENST00000600055 FDXRP22570 491 aa14.7□□□□□ -0.06
LIG1-219ENST00000600055 CBSP35520 551 aa14.7□□□□□ -0.06
LIG1-219ENST00000600055 CCNFP41002 786 aa14.7□□□□□ -0.06
LIG1-219ENST00000600055 TLE3Q04726 772 aa14.7□□□□□ -0.06
LIG1-219ENST00000600055 SRSF6Q13247 344 aaKnown RBP14.7□□□□□ -0.06
LIG1-219ENST00000600055 TUBB3Q13509 450 aa14.7□□□□□ -0.06
LIG1-219ENST00000600055 FASTKQ14296 549 aaKnown RBP14.7□□□□□ -0.06
LIG1-219ENST00000600055 KIR2DS3Q14952 304 aa14.7□□□□□ -0.06
LIG1-219ENST00000600055 GPR19Q15760 415 aa14.7□□□□□ -0.06
LIG1-219ENST00000600055 ZIC1Q15915 447 aa14.7□□□□□ -0.06
LIG1-219ENST00000600055 UBAP2Q5T6F2 1119 aaKnown RBP14.7□□□□□ -0.06
LIG1-219ENST00000600055 FAM45BPQ6NSW5 357 aa14.7□□□□□ -0.06
LIG1-219ENST00000600055 CARFQ8N187 725 aa14.7□□□□□ -0.06
LIG1-219ENST00000600055 FAM45AQ8TCE6 357 aa14.7□□□□□ -0.06
LIG1-219ENST00000600055 ASB11Q8WXH4 323 aa14.7□□□□□ -0.06
LIG1-219ENST00000600055 PKP4Q99569 1192 aa14.7□□□□□ -0.06
LIG1-219ENST00000600055 MCMBPQ9BTE3 642 aa14.7□□□□□ -0.06
LIG1-219ENST00000600055 BTRCQ9Y297 605 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms