RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 IL11RAQ14626 422 aa13.41□□□□□ -0.26
UPF1-205ENST00000598209 KLHL38Q2WGJ6 581 aa13.41□□□□□ -0.26
UPF1-205ENST00000598209 CYB5D1Q6P9G0 228 aa13.41□□□□□ -0.26
UPF1-205ENST00000598209 SPESP1Q6UW49 350 aa13.41□□□□□ -0.26
UPF1-205ENST00000598209 GALNT7Q86SF2 657 aa13.41□□□□□ -0.26
UPF1-205ENST00000598209 SPNS2Q8IVW8 549 aa13.41□□□□□ -0.26
UPF1-205ENST00000598209 D2HGDHQ8N465 521 aa13.41□□□□□ -0.26
UPF1-205ENST00000598209 INPP5DQ92835 1189 aa13.41□□□□□ -0.26
UPF1-205ENST00000598209 RAD51AP1Q96B01 352 aa13.41□□□□□ -0.26
UPF1-205ENST00000598209 ELMO2Q96JJ3 720 aa13.41□□□□□ -0.26
UPF1-205ENST00000598209 IL17FQ96PD4 163 aa13.41□□□□□ -0.26
UPF1-205ENST00000598209 NDNQ99608 321 aa13.41□□□□□ -0.26
UPF1-205ENST00000598209 LRRC1Q9BTT6 524 aa13.41□□□□□ -0.26
UPF1-205ENST00000598209 MENTQ9BUN1 341 aa13.41□□□□□ -0.26
UPF1-205ENST00000598209 TUBB2BQ9BVA1 445 aa13.41□□□□□ -0.26
UPF1-205ENST00000598209 PITPNM3Q9BZ71 974 aa13.41□□□□□ -0.26
UPF1-205ENST00000598209 PDE7BQ9NP56 450 aa13.41□□□□□ -0.26
UPF1-205ENST00000598209 SAYSD1Q9NPB0 183 aa13.41□□□□□ -0.26
UPF1-205ENST00000598209 SOHLH2Q9NX45 425 aa13.41□□□□□ -0.26
UPF1-205ENST00000598209 SPHK1Q9NYA1 384 aa13.41□□□□□ -0.26
UPF1-205ENST00000598209 LHX6Q9UPM6 363 aa13.41□□□□□ -0.26
UPF1-205ENST00000598209 BTRCQ9Y297 605 aa13.41□□□□□ -0.26
UPF1-205ENST00000598209 SSUH2Q9Y2M2 353 aa13.41□□□□□ -0.26
UPF1-205ENST00000598209 DHRS7Q9Y394 339 aa13.41□□□□□ -0.26
UPF1-205ENST00000598209 ZFHX4Q86UP3 3567 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 ISM1B1AKI9 464 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 RASGRF2O14827 1237 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 VPS26AO75436 327 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 STK17BO94768 372 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 FGF5P12034 268 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 PVRP15151 417 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 ST6GAL1P15907 406 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 PEBP1P30086 187 aaKnown RBP13.4□□□□□ -0.26
UPF1-205ENST00000598209 CCNFP41002 786 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 ATP1A2P50993 1020 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 UCNP55089 124 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 TMPRSS3P57727 454 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 CAV1Q03135 178 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 MGAT5Q09328 741 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 TRADDQ15628 312 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 CCSMST1Q4G0I0 132 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 RBM20Q5T481 1227 aaKnown RBP13.4□□□□□ -0.26
UPF1-205ENST00000598209 TMTC4Q5T4D3 741 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 NEK10Q6ZWH5 1172 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 TRIM73Q86UV7 250 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 PPP1R3BQ86XI6 285 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 RASGRP3Q8IV61 690 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 C2orf73Q8N5S3 287 aaPredicted RBP13.4□□□□□ -0.26
UPF1-205ENST00000598209 LMNTD1Q8N9Z9 388 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 LINC01555Q8NAE3 123 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 OR2L8Q8NGY9 312 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 KIF18AQ8NI77 898 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 CD200R1Q8TD46 325 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 MAGEC3Q8TD91 643 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 PYROXD1Q8WU10 500 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 NKD1Q969G9 470 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 RNF31Q96EP0 1072 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 TRAPPC9Q96Q05 1148 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 OR2A14Q96R47 310 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 CCNL2Q96S94 520 aaPredicted RBP13.4□□□□□ -0.26
UPF1-205ENST00000598209 RAB11FIP5Q9BXF6 653 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 SPRY4Q9C004 299 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 TWSG1Q9GZX9 223 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 KLHL25Q9H0H3 589 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 CPNE5Q9HCH3 593 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 FGF21Q9NSA1 209 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 PILRAQ9UKJ1 303 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 RARRES3Q9UL19 164 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 SLC39A10Q9ULF5 831 aa13.4□□□□□ -0.26
UPF1-205ENST00000598209 TMEM184BQ9Y519 407 aaPredicted RBP13.4□□□□□ -0.26
UPF1-205ENST00000598209 LAMA5O15230 3695 aa13.4□□□□□ -0.27
UPF1-205ENST00000598209 KRT87PA6NCN2 255 aa13.39□□□□□ -0.27
UPF1-205ENST00000598209 RAD1O60671 282 aa13.39□□□□□ -0.27
UPF1-205ENST00000598209 PSIP1O75475 530 aaKnown RBP13.39□□□□□ -0.27
UPF1-205ENST00000598209 SPAG6O75602 509 aa13.39□□□□□ -0.27
UPF1-205ENST00000598209 MPC1LP0DKB6 136 aa13.39□□□□□ -0.27
UPF1-205ENST00000598209 ENO3P13929 434 aaPredicted RBP13.39□□□□□ -0.27
UPF1-205ENST00000598209 ZNF28P17035 718 aa13.39□□□□□ -0.27
UPF1-205ENST00000598209 CD9P21926 228 aa13.39□□□□□ -0.27
UPF1-205ENST00000598209 CXADRP78310 365 aa13.39□□□□□ -0.27
UPF1-205ENST00000598209 SRSF6Q13247 344 aaKnown RBP13.39□□□□□ -0.27
UPF1-205ENST00000598209 KIR2DS3Q14952 304 aa13.39□□□□□ -0.27
UPF1-205ENST00000598209 GPR19Q15760 415 aa13.39□□□□□ -0.27
UPF1-205ENST00000598209 MANEAQ5SRI9 462 aa13.39□□□□□ -0.27
UPF1-205ENST00000598209 UGT3A1Q6NUS8 523 aa13.39□□□□□ -0.27
UPF1-205ENST00000598209 ZDHHC24Q6UX98 284 aa13.39□□□□□ -0.27
UPF1-205ENST00000598209 CAPN12Q6ZSI9 719 aa13.39□□□□□ -0.27
UPF1-205ENST00000598209 VASH2Q86V25 355 aa13.39□□□□□ -0.27
UPF1-205ENST00000598209 TAX1BP1Q86VP1 789 aa13.39□□□□□ -0.27
UPF1-205ENST00000598209 PALM2Q8IXS6 379 aa13.39□□□□□ -0.27
UPF1-205ENST00000598209 CPNE9Q8IYJ1 553 aa13.39□□□□□ -0.27
UPF1-205ENST00000598209 CACNA2D3Q8IZS8 1091 aa13.39□□□□□ -0.27
UPF1-205ENST00000598209 MMGT1Q8N4V1 131 aa13.39□□□□□ -0.27
UPF1-205ENST00000598209 RAB42Q8N4Z0 105 aa13.39□□□□□ -0.27
UPF1-205ENST00000598209 MNS1Q8NEH6 495 aa13.39□□□□□ -0.27
UPF1-205ENST00000598209 FLVCR1-AS1Q8TAF5 88 aa13.39□□□□□ -0.27
UPF1-205ENST00000598209 FBXO25Q8TCJ0 367 aa13.39□□□□□ -0.27
UPF1-205ENST00000598209 ULBP3Q9BZM4 244 aa13.39□□□□□ -0.27
UPF1-205ENST00000598209 PRORYQ9H606 182 aa13.39□□□□□ -0.27
UPF1-205ENST00000598209 TAS2R13Q9NYV9 303 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms