RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 UNC5AQ6ZN44 842 aa14.65□□□□□ -0.06
TGFB1-202ENST00000597453 C17orf53Q8N3J3 647 aaPredicted RBP14.65□□□□□ -0.06
TGFB1-202ENST00000597453 C19orf47Q8N9M1 422 aaKnown RBP14.65□□□□□ -0.06
TGFB1-202ENST00000597453 FLVCR1-AS1Q8TAF5 88 aa14.65□□□□□ -0.06
TGFB1-202ENST00000597453 GRK7Q8WTQ7 553 aa14.65□□□□□ -0.06
TGFB1-202ENST00000597453 SLC25A23Q9BV35 468 aa14.65□□□□□ -0.06
TGFB1-202ENST00000597453 MLXIPLQ9NP71 852 aa14.65□□□□□ -0.06
TGFB1-202ENST00000597453 SPHK1Q9NYA1 384 aa14.65□□□□□ -0.06
TGFB1-202ENST00000597453 ANKMY1Q9P2S6 941 aa14.65□□□□□ -0.06
TGFB1-202ENST00000597453 SERTAD3Q9UJW9 196 aa14.65□□□□□ -0.06
TGFB1-202ENST00000597453 PLAGL1Q9UM63 463 aa14.65□□□□□ -0.06
TGFB1-202ENST00000597453 ASF1AQ9Y294 204 aa14.65□□□□□ -0.06
TGFB1-202ENST00000597453 SHANK1Q9Y566 2161 aa14.65□□□□□ -0.06
TGFB1-202ENST00000597453 E7EQ34 232 aa14.64□□□□□ -0.07
TGFB1-202ENST00000597453 H3BMH7 237 aa14.64□□□□□ -0.07
TGFB1-202ENST00000597453 AP3B1O00203 1094 aa14.64□□□□□ -0.07
TGFB1-202ENST00000597453 ZNF749O43361 778 aa14.64□□□□□ -0.07
TGFB1-202ENST00000597453 TMEM63AO94886 807 aa14.64□□□□□ -0.07
TGFB1-202ENST00000597453 GOT2P00505 430 aaKnown RBP14.64□□□□□ -0.07
TGFB1-202ENST00000597453 KRT14P02533 472 aa14.64□□□□□ -0.07
TGFB1-202ENST00000597453 CTSBP07858 339 aa14.64□□□□□ -0.07
TGFB1-202ENST00000597453 CHRM5P08912 532 aaPredicted RBP14.64□□□□□ -0.07
TGFB1-202ENST00000597453 TPSB2P20231 275 aa14.64□□□□□ -0.07
TGFB1-202ENST00000597453 SHMT2P34897 504 aa14.64□□□□□ -0.07
TGFB1-202ENST00000597453 GABRA4P48169 554 aa14.64□□□□□ -0.07
TGFB1-202ENST00000597453 PGDP52209 483 aa14.64□□□□□ -0.07
TGFB1-202ENST00000597453 CDK16Q00536 496 aa14.64□□□□□ -0.07
TGFB1-202ENST00000597453 SEMA3AQ14563 771 aa14.64□□□□□ -0.07
TGFB1-202ENST00000597453 NCF4Q15080 339 aa14.64□□□□□ -0.07
TGFB1-202ENST00000597453 TPSAB1Q15661 275 aa14.64□□□□□ -0.07
TGFB1-202ENST00000597453 DEFB110Q30KQ9 67 aa14.64□□□□□ -0.07
TGFB1-202ENST00000597453 NADK2Q4G0N4 442 aa14.64□□□□□ -0.07
TGFB1-202ENST00000597453 SYTL3Q4VX76 610 aa14.64□□□□□ -0.07
TGFB1-202ENST00000597453 ZNF385CQ66K41 422 aaPredicted RBP14.64□□□□□ -0.07
TGFB1-202ENST00000597453 ZNF534Q76KX8 674 aa14.64□□□□□ -0.07
TGFB1-202ENST00000597453 CREG2Q8IUH2 290 aa14.64□□□□□ -0.07
TGFB1-202ENST00000597453 ZBTB2Q8N680 514 aa14.64□□□□□ -0.07
TGFB1-202ENST00000597453 HDAC10Q969S8 669 aa14.64□□□□□ -0.07
TGFB1-202ENST00000597453 ZNF778Q96MU6 729 aa14.64□□□□□ -0.07
TGFB1-202ENST00000597453 OR2A14Q96R47 310 aa14.64□□□□□ -0.07
TGFB1-202ENST00000597453 RANBP9Q96S59 729 aa14.64□□□□□ -0.07
TGFB1-202ENST00000597453 TDRKHQ9Y2W6 561 aaKnown RBP14.64□□□□□ -0.07
TGFB1-202ENST00000597453 NEU2Q9Y3R4 380 aa14.64□□□□□ -0.07
TGFB1-202ENST00000597453 PCDHGA9Q9Y5G4 932 aaKnown RBP14.64□□□□□ -0.07
TGFB1-202ENST00000597453 SPTBN1Q01082 2364 aaKnown RBP14.63□□□□□ -0.07
TGFB1-202ENST00000597453 PRRC2CQ9Y520 2896 aaKnown RBP14.63□□□□□ -0.07
TGFB1-202ENST00000597453 ANKRD12Q6UB98 2062 aa14.63□□□□□ -0.07
TGFB1-202ENST00000597453 HEATR9A2RTY3 570 aa14.63□□□□□ -0.07
TGFB1-202ENST00000597453 QSOX1O00391 747 aa14.63□□□□□ -0.07
TGFB1-202ENST00000597453 MAP3K7O43318 606 aa14.63□□□□□ -0.07
TGFB1-202ENST00000597453 CEACAM4O75871 244 aa14.63□□□□□ -0.07
TGFB1-202ENST00000597453 PEBP1P30086 187 aaKnown RBP14.63□□□□□ -0.07
TGFB1-202ENST00000597453 MAGEA6P43360 314 aa14.63□□□□□ -0.07
TGFB1-202ENST00000597453 VPS41P49754 854 aa14.63□□□□□ -0.07
TGFB1-202ENST00000597453 CSE1LP55060 971 aaKnown RBP14.63□□□□□ -0.07
TGFB1-202ENST00000597453 GPS1Q13098 491 aa14.63□□□□□ -0.07
TGFB1-202ENST00000597453 TSTD2Q5T7W7 516 aa14.63□□□□□ -0.07
TGFB1-202ENST00000597453 TBC1D21Q8IYX1 336 aa14.63□□□□□ -0.07
TGFB1-202ENST00000597453 OR5K2Q8NHB8 316 aa14.63□□□□□ -0.07
TGFB1-202ENST00000597453 SLCO2A1Q92959 643 aa14.63□□□□□ -0.07
TGFB1-202ENST00000597453 CAPZA3Q96KX2 299 aa14.63□□□□□ -0.07
TGFB1-202ENST00000597453 SLC7A5P2Q9GIP4 190 aa14.63□□□□□ -0.07
TGFB1-202ENST00000597453 SPRTNQ9H040 489 aaPredicted RBP14.63□□□□□ -0.07
TGFB1-202ENST00000597453 RNF14Q9UBS8 474 aa14.63□□□□□ -0.07
TGFB1-202ENST00000597453 UTP20O75691 2785 aaKnown RBP14.63□□□□□ -0.07
TGFB1-202ENST00000597453 OR56A5P0C7T3 313 aa14.62□□□□□ -0.07
TGFB1-202ENST00000597453 CBSLP0DN79 551 aa14.62□□□□□ -0.07
TGFB1-202ENST00000597453 CCR7P32248 378 aa14.62□□□□□ -0.07
TGFB1-202ENST00000597453 CBSP35520 551 aa14.62□□□□□ -0.07
TGFB1-202ENST00000597453 ETF1P62495 437 aaKnown RBP14.62□□□□□ -0.07
TGFB1-202ENST00000597453 ACVR1Q04771 509 aa14.62□□□□□ -0.07
TGFB1-202ENST00000597453 ATP1A4Q13733 1029 aa14.62□□□□□ -0.07
TGFB1-202ENST00000597453 KCNJ11Q14654 390 aa14.62□□□□□ -0.07
TGFB1-202ENST00000597453 TRIP13Q15645 432 aaPredicted RBP14.62□□□□□ -0.07
TGFB1-202ENST00000597453 C1orf189Q5VU69 101 aa14.62□□□□□ -0.07
TGFB1-202ENST00000597453 AFTPHQ6ULP2 937 aa14.62□□□□□ -0.07
TGFB1-202ENST00000597453 HOOK3Q86VS8 718 aa14.62□□□□□ -0.07
TGFB1-202ENST00000597453 ATCAYQ86WG3 371 aa14.62□□□□□ -0.07
TGFB1-202ENST00000597453 VRK3Q8IV63 474 aa14.62□□□□□ -0.07
TGFB1-202ENST00000597453 LMNTD1Q8N9Z9 388 aa14.62□□□□□ -0.07
TGFB1-202ENST00000597453 FDCSPQ8NFU4 85 aa14.62□□□□□ -0.07
TGFB1-202ENST00000597453 LKAAEAR1Q8TD35 194 aa14.62□□□□□ -0.07
TGFB1-202ENST00000597453 PEX13Q92968 403 aa14.62□□□□□ -0.07
TGFB1-202ENST00000597453 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.62□□□□□ -0.07
TGFB1-202ENST00000597453 TCTN2Q96GX1 697 aa14.62□□□□□ -0.07
TGFB1-202ENST00000597453 NUDT9Q9BW91 350 aa14.62□□□□□ -0.07
TGFB1-202ENST00000597453 DDX47Q9H0S4 455 aaKnown RBP14.62□□□□□ -0.07
TGFB1-202ENST00000597453 OR6C2Q9NZP2 312 aa14.62□□□□□ -0.07
TGFB1-202ENST00000597453 POLG2Q9UHN1 485 aa14.62□□□□□ -0.07
TGFB1-202ENST00000597453 RIMKLBQ9ULI2 386 aa14.62□□□□□ -0.07
TGFB1-202ENST00000597453 A0A0J9YY10 115 aa14.61□□□□□ -0.07
TGFB1-202ENST00000597453 TTLL8A6PVC2 850 aa14.61□□□□□ -0.07
TGFB1-202ENST00000597453 IQCF5A8MTL0 148 aa14.61□□□□□ -0.07
TGFB1-202ENST00000597453 C9J4A7 227 aa14.61□□□□□ -0.07
TGFB1-202ENST00000597453 OR2B3O76000 313 aa14.61□□□□□ -0.07
TGFB1-202ENST00000597453 ATXN8OSP0DMR3 200 aa14.61□□□□□ -0.07
TGFB1-202ENST00000597453 ADRA1DP25100 572 aa14.61□□□□□ -0.07
TGFB1-202ENST00000597453 UQCRFS1P47985 274 aa14.61□□□□□ -0.07
TGFB1-202ENST00000597453 KCTD19Q17RG1 926 aaPredicted RBP14.61□□□□□ -0.07
TGFB1-202ENST00000597453 LYPLAL1Q5VWZ2 237 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms