RNA–Protein interactions for RNA: ENST00000596842.5

UPF1-204, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,825 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-204ENST00000596842 ADAM23O75077 832 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 SLC11A2P49281 568 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 DAB2P98082 770 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 PON2Q15165 354 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 COQ5Q5HYK3 327 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 SERPINA9Q86WD7 417 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 RGL4Q8IZJ4 473 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 CLIP4Q8N3C7 705 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 TRPV1Q8NER1 839 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 RBM4BQ9BQ04 359 aaKnown RBP14.94□□□□□ -0.02
UPF1-204ENST00000596842 RBM4Q9BWF3 364 aaKnown RBP14.94□□□□□ -0.02
UPF1-204ENST00000596842 TBCCD1Q9NVR7 557 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 CREG1O75629 220 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 SEC14L2O76054 403 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 MYCP01106 439 aaPredicted RBP14.94□□□□□ -0.02
UPF1-204ENST00000596842 IGFBP5P24593 272 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 KCNA10Q16322 511 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 MORN1Q5T089 497 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 ZCCHC8Q6NZY4 707 aaKnown RBP14.94□□□□□ -0.02
UPF1-204ENST00000596842 PAGE2Q7Z2X7 111 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 IQCF2Q8IXL9 164 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 MICU2Q8IYU8 434 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 LEMD2Q8NC56 503 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 GTF2H4Q92759 462 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 EGLN2Q96KS0 407 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 PSKH2Q96QS6 385 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 LRTM1Q9HBL6 345 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 POPDC3Q9HBV1 291 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 ACSL4O60488 711 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 NTRK1P04629 796 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 HTR1AP08908 422 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 ATP5C1P36542 298 aaKnown RBP14.94□□□□□ -0.02
UPF1-204ENST00000596842 GNPDA1P46926 289 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 ACVR1Q04771 509 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 SF1Q15637 639 aaKnown RBP14.94□□□□□ -0.02
UPF1-204ENST00000596842 AHSA2Q719I0 299 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 BEND5Q7L4P6 421 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 SELENOMQ8WWX9 145 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 MBOAT4Q96T53 435 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 ITM2CQ9NQX7 267 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 PAK1IP1Q9NWT1 392 aaPredicted RBP14.94□□□□□ -0.02
UPF1-204ENST00000596842 SLC25A37Q9NYZ2 338 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 ERGIC3Q9Y282 383 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 ZNF451Q9Y4E5 1061 aa14.94□□□□□ -0.02
UPF1-204ENST00000596842 ZSCAN5BA6NJL1 495 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 EPOP01588 193 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 PRR35P0CG20 571 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 MSH3P20585 1137 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 CORO1AP31146 461 aaKnown RBP14.93□□□□□ -0.02
UPF1-204ENST00000596842 S100A3P33764 101 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 DCTP40126 519 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 CYP4F2P78329 520 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 HSPA14Q0VDF9 509 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 NPTX1Q15818 432 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 DOK6Q6PKX4 331 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 ZNF621Q6ZSS3 439 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 GALNT7Q86SF2 657 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 PLD3Q8IV08 490 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 MAGED4Q96JG8 741 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 PPP3R2Q96LZ3 170 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 SGIP1Q9BQI5 828 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 HMG20AQ9NP66 347 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 NMRK2Q9NPI5 230 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 GIN1Q9NXP7 522 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 PCDHB14Q9Y5E9 798 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 KRBA1A5PL33 1030 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 PER2O15055 1255 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 FAM20BO75063 409 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 TYMPP19971 482 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 RGS4P49798 205 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 DPY19L1Q2PZI1 675 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 SMU1Q2TAY7 513 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 CLLU1OSQ5K130 101 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 SUSD1Q6UWL2 747 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 VTCN1Q7Z7D3 282 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 MRPL10Q7Z7H8 261 aaKnown RBP14.93□□□□□ -0.02
UPF1-204ENST00000596842 ADAMTSL2Q86TH1 951 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 ZDHHC21Q8IVQ6 265 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 APOLD1Q96LR9 279 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 BBS2Q9BXC9 721 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 ROGDIQ9GZN7 287 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 RUBCNLQ9H714 662 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 GMPPBQ9Y5P6 360 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 MYO1DO94832 1006 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 EPHA2P29317 976 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 CLK1P49759 484 aaKnown RBP14.93□□□□□ -0.02
UPF1-204ENST00000596842 ZNF157P51786 506 aaPredicted RBP14.93□□□□□ -0.02
UPF1-204ENST00000596842 ZXDBP98169 803 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 EMX1Q04741 257 aaPredicted RBP14.93□□□□□ -0.02
UPF1-204ENST00000596842 TRAF7Q6Q0C0 670 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 RSPO2Q6UXX9 243 aaPredicted RBP14.93□□□□□ -0.02
UPF1-204ENST00000596842 HORMAD1Q86X24 394 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 GOLM1Q8NBJ4 401 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 TSPEARQ8WU66 669 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 SH3YL1Q96HL8 342 aaPredicted RBP14.93□□□□□ -0.02
UPF1-204ENST00000596842 TRIB3Q96RU7 358 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 FAM126AQ9BYI3 521 aaPredicted RBP14.93□□□□□ -0.02
UPF1-204ENST00000596842 C6orf62Q9GZU0 229 aaPredicted RBP14.93□□□□□ -0.02
UPF1-204ENST00000596842 TRPV5Q9NQA5 729 aa14.93□□□□□ -0.02
UPF1-204ENST00000596842 ELOVL2Q9NXB9 296 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms