RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 ST6GAL1P15907 406 aa20.4■□□□□ 0.86
PNKP-209ENST00000596726 WT1P19544 449 aaPredicted RBP20.4■□□□□ 0.86
PNKP-209ENST00000596726 MAP4P27816 1152 aaKnown RBP20.4■□□□□ 0.86
PNKP-209ENST00000596726 RAB28P51157 221 aa20.4■□□□□ 0.86
PNKP-209ENST00000596726 ACSBG2Q5FVE4 666 aa20.4■□□□□ 0.86
PNKP-209ENST00000596726 CNSTQ6PJW8 725 aa20.4■□□□□ 0.86
PNKP-209ENST00000596726 BBOF1Q8ND07 529 aa20.4■□□□□ 0.86
PNKP-209ENST00000596726 KCNJ9Q92806 393 aa20.4■□□□□ 0.86
PNKP-209ENST00000596726 ZNF501Q96CX3 271 aaPredicted RBP20.4■□□□□ 0.86
PNKP-209ENST00000596726 CERS2Q96G23 380 aa20.4■□□□□ 0.86
PNKP-209ENST00000596726 SLC30A3Q99726 388 aa20.4■□□□□ 0.86
PNKP-209ENST00000596726 RARRES3Q9UL19 164 aa20.4■□□□□ 0.86
PNKP-209ENST00000596726 CHMP2BQ9UQN3 213 aa20.4■□□□□ 0.86
PNKP-209ENST00000596726 TEX51A0A1B0GUA7 166 aa20.39■□□□□ 0.85
PNKP-209ENST00000596726 E5RI56 91 aa20.39■□□□□ 0.85
PNKP-209ENST00000596726 MSL3P1P0C860 447 aa20.39■□□□□ 0.85
PNKP-209ENST00000596726 UGT2B7P16662 529 aa20.39■□□□□ 0.85
PNKP-209ENST00000596726 GABRB3P28472 473 aa20.39■□□□□ 0.85
PNKP-209ENST00000596726 PEBP1P30086 187 aaKnown RBP20.39■□□□□ 0.85
PNKP-209ENST00000596726 TUBB4BP68371 445 aa20.39■□□□□ 0.85
PNKP-209ENST00000596726 TUBB2AQ13885 445 aa20.39■□□□□ 0.85
PNKP-209ENST00000596726 FRG1Q14331 258 aaKnown RBP20.39■□□□□ 0.85
PNKP-209ENST00000596726 HP1BP3Q5SSJ5 553 aaPredicted RBP20.39■□□□□ 0.85
PNKP-209ENST00000596726 TMTC4Q5T4D3 741 aa20.39■□□□□ 0.85
PNKP-209ENST00000596726 DUPD1Q68J44 220 aa20.39■□□□□ 0.85
PNKP-209ENST00000596726 RASGRP3Q8IV61 690 aa20.39■□□□□ 0.85
PNKP-209ENST00000596726 IL22RA1Q8N6P7 574 aa20.39■□□□□ 0.85
PNKP-209ENST00000596726 LINC01555Q8NAE3 123 aa20.39■□□□□ 0.85
PNKP-209ENST00000596726 GIMAP7Q8NHV1 300 aa20.39■□□□□ 0.85
PNKP-209ENST00000596726 RAD51AP1Q96B01 352 aa20.39■□□□□ 0.85
PNKP-209ENST00000596726 ELMO2Q96JJ3 720 aa20.39■□□□□ 0.85
PNKP-209ENST00000596726 C16orf45Q96MC5 204 aaPredicted RBP20.39■□□□□ 0.85
PNKP-209ENST00000596726 AARSD1Q9BTE6 412 aaKnown RBP20.39■□□□□ 0.85
PNKP-209ENST00000596726 TUBB2BQ9BVA1 445 aa20.39■□□□□ 0.85
PNKP-209ENST00000596726 ULBP3Q9BZM4 244 aa20.39■□□□□ 0.85
PNKP-209ENST00000596726 CCDC68Q9H2F9 335 aa20.39■□□□□ 0.85
PNKP-209ENST00000596726 WDR70Q9NW82 654 aa20.39■□□□□ 0.85
PNKP-209ENST00000596726 WHRNQ9P202 907 aa20.39■□□□□ 0.85
PNKP-209ENST00000596726 ZC3H7BQ9UGR2 993 aaKnown RBP20.39■□□□□ 0.85
PNKP-209ENST00000596726 RUVBL2Q9Y230 463 aaKnown RBP20.39■□□□□ 0.85
PNKP-209ENST00000596726 DHRS7Q9Y394 339 aa20.39■□□□□ 0.85
PNKP-209ENST00000596726 MRFAP1Q9Y605 127 aa20.39■□□□□ 0.85
PNKP-209ENST00000596726 PCM1Q15154 2024 aa20.39■□□□□ 0.85
PNKP-209ENST00000596726 RASGRF2O14827 1237 aa20.38■□□□□ 0.85
PNKP-209ENST00000596726 KIAA0754O94854 1291 aa20.38■□□□□ 0.85
PNKP-209ENST00000596726 TIAF1O95411 115 aa20.38■□□□□ 0.85
PNKP-209ENST00000596726 PVRP15151 417 aa20.38■□□□□ 0.85
PNKP-209ENST00000596726 CD9P21926 228 aa20.38■□□□□ 0.85
PNKP-209ENST00000596726 CCNFP41002 786 aa20.38■□□□□ 0.85
PNKP-209ENST00000596726 ABHD18Q0P651 414 aa20.38■□□□□ 0.85
PNKP-209ENST00000596726 KIR2DS3Q14952 304 aa20.38■□□□□ 0.85
PNKP-209ENST00000596726 GPR19Q15760 415 aa20.38■□□□□ 0.85
PNKP-209ENST00000596726 TEDDM1Q5T9Z0 273 aa20.38■□□□□ 0.85
PNKP-209ENST00000596726 PWWP2BQ6NUJ5 590 aa20.38■□□□□ 0.85
PNKP-209ENST00000596726 KIAA0408Q6ZU52 694 aa20.38■□□□□ 0.85
PNKP-209ENST00000596726 NEK10Q6ZWH5 1172 aa20.38■□□□□ 0.85
PNKP-209ENST00000596726 GALNT7Q86SF2 657 aa20.38■□□□□ 0.85
PNKP-209ENST00000596726 OR2L8Q8NGY9 312 aa20.38■□□□□ 0.85
PNKP-209ENST00000596726 OR8K5Q8NH50 307 aa20.38■□□□□ 0.85
PNKP-209ENST00000596726 GABPB2Q8TAK5 448 aaPredicted RBP20.38■□□□□ 0.85
PNKP-209ENST00000596726 CFAP36Q96G28 342 aa20.38■□□□□ 0.85
PNKP-209ENST00000596726 FOPNLQ96NB1 174 aa20.38■□□□□ 0.85
PNKP-209ENST00000596726 SYTL2Q9HCH5 934 aa20.38■□□□□ 0.85
PNKP-209ENST00000596726 SOHLH2Q9NX45 425 aa20.38■□□□□ 0.85
PNKP-209ENST00000596726 CDC23Q9UJX2 597 aa20.38■□□□□ 0.85
PNKP-209ENST00000596726 ATMQ13315 3056 aa20.38■□□□□ 0.85
PNKP-209ENST00000596726 AHSGP02765 367 aa20.37■□□□□ 0.85
PNKP-209ENST00000596726 LIFP15018 202 aa20.37■□□□□ 0.85
PNKP-209ENST00000596726 BDKRB1P46663 353 aa20.37■□□□□ 0.85
PNKP-209ENST00000596726 CARSP49589 748 aaKnown RBP20.37■□□□□ 0.85
PNKP-209ENST00000596726 TIAL1Q01085 375 aaKnown RBP eCLIP20.37■□□□□ 0.85
PNKP-209ENST00000596726 PDIA2Q13087 525 aaKnown RBP20.37■□□□□ 0.85
PNKP-209ENST00000596726 SLC5A12Q1EHB4 618 aa20.37■□□□□ 0.85
PNKP-209ENST00000596726 KLHL38Q2WGJ6 581 aa20.37■□□□□ 0.85
PNKP-209ENST00000596726 CCSMST1Q4G0I0 132 aa20.37■□□□□ 0.85
PNKP-209ENST00000596726 TTC23LQ6PF05 361 aa20.37■□□□□ 0.85
PNKP-209ENST00000596726 TRMT10BQ6PF06 316 aaKnown RBP20.37■□□□□ 0.85
PNKP-209ENST00000596726 ANKMY2Q8IV38 441 aa20.37■□□□□ 0.85
PNKP-209ENST00000596726 ESX1Q8N693 406 aa20.37■□□□□ 0.85
PNKP-209ENST00000596726 SKA2Q8WVK7 121 aaPredicted RBP20.37■□□□□ 0.85
PNKP-209ENST00000596726 INPP5DQ92835 1189 aa20.37■□□□□ 0.85
PNKP-209ENST00000596726 IL17FQ96PD4 163 aa20.37■□□□□ 0.85
PNKP-209ENST00000596726 GPR21Q99679 349 aa20.37■□□□□ 0.85
PNKP-209ENST00000596726 RAB11FIP5Q9BXF6 653 aa20.37■□□□□ 0.85
PNKP-209ENST00000596726 CHRNA10Q9GZZ6 450 aa20.37■□□□□ 0.85
PNKP-209ENST00000596726 DPH5Q9H2P9 285 aa20.37■□□□□ 0.85
PNKP-209ENST00000596726 GRHL1Q9NZI5 618 aa20.37■□□□□ 0.85
PNKP-209ENST00000596726 CIDEBQ9UHD4 219 aa20.37■□□□□ 0.85
PNKP-209ENST00000596726 PCDHGA4Q9Y5G9 962 aa20.37■□□□□ 0.85
PNKP-209ENST00000596726 A0A0J9YY10 115 aa20.36■□□□□ 0.85
PNKP-209ENST00000596726 LOC101059948A0A1B0GTJ6 334 aa20.36■□□□□ 0.85
PNKP-209ENST00000596726 ISM1B1AKI9 464 aa20.36■□□□□ 0.85
PNKP-209ENST00000596726 PSIP1O75475 530 aaKnown RBP20.36■□□□□ 0.85
PNKP-209ENST00000596726 STAT5AP42229 794 aa20.36■□□□□ 0.85
PNKP-209ENST00000596726 FASTKD3Q14CZ7 662 aaKnown RBP20.36■□□□□ 0.85
PNKP-209ENST00000596726 TTLL9Q3SXZ7 439 aa20.36■□□□□ 0.85
PNKP-209ENST00000596726 C6orf15Q6UXA7 325 aaPredicted RBP20.36■□□□□ 0.85
PNKP-209ENST00000596726 TRIM73Q86UV7 250 aa20.36■□□□□ 0.85
PNKP-209ENST00000596726 SPNS2Q8IVW8 549 aa20.36■□□□□ 0.85
PNKP-209ENST00000596726 LMNTD1Q8N9Z9 388 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms